Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 YML007C-AYML007C-A 111 nt1.33□□□□□ -2.2
YRF1-4O13559 YOR072W-AYOR072W-A 249 nt1.33□□□□□ -2.2
YRF1-4O13559 YPR063CYPR063C 423 nt1.33□□□□□ -2.2
YRF1-4O13559 NUP157YER105C 4176 nt1.33□□□□□ -2.2
YRF1-4O13559 NIP100YPL174C 2607 nt1.32□□□□□ -2.2
YRF1-4O13559 SLI15YBR156C 2097 nt1.32□□□□□ -2.2
YRF1-4O13559 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
YRF1-4O13559 IRC23YOR044W 474 nt1.32□□□□□ -2.2
YRF1-4O13559 YBR012CYBR012C 420 nt1.32□□□□□ -2.2
YRF1-4O13559 snR14snR14 160 nt1.32□□□□□ -2.2
YRF1-4O13559 NUP188YML103C 4968 nt1.32□□□□□ -2.2
YRF1-4O13559 APL3YBL037W 3078 nt1.31□□□□□ -2.2
YRF1-4O13559 AIM44YPL158C 2277 nt1.31□□□□□ -2.2
YRF1-4O13559 YIL020C-AYIL020C-A 339 nt1.31□□□□□ -2.2
YRF1-4O13559 YPR012WYPR012W 255 nt1.31□□□□□ -2.2
YRF1-4O13559 RAD9YDR217C 3930 nt1.31□□□□□ -2.2
YRF1-4O13559 LCD1YDR499W 2244 nt1.31□□□□□ -2.2
YRF1-4O13559 RAD34YDR314C 2079 nt1.3□□□□□ -2.2
YRF1-4O13559 RIM20YOR275C 1986 nt1.3□□□□□ -2.2
YRF1-4O13559 YPR002C-AYPR002C-A 198 nt1.3□□□□□ -2.2
YRF1-4O13559 PAN2YGL094C 3348 nt1.29□□□□□ -2.2
YRF1-4O13559 RPS20YHL015W 366 nt1.29□□□□□ -2.2
YRF1-4O13559 YIL142C-AYIL142C-A 333 nt1.29□□□□□ -2.2
YRF1-4O13559 MMS4YBR098W 2076 nt1.29□□□□□ -2.2
YRF1-4O13559 snR72snR72 98 nt1.28□□□□□ -2.2
YRF1-4O13559 YIR044CYIR044C 186 nt1.28□□□□□ -2.2
YRF1-4O13559 YPR170W-AYPR170W-A 186 nt1.28□□□□□ -2.2
YRF1-4O13559 BPH1YCR032W 6504 nt1.28□□□□□ -2.2
YRF1-4O13559 IFH1YLR223C 3258 nt1.28□□□□□ -2.2
YRF1-4O13559 YAR053WYAR053W 297 nt1.27□□□□□ -2.21
YRF1-4O13559 BIR1YJR089W 2865 nt1.27□□□□□ -2.21
YRF1-4O13559 BUD3YCL014W 4911 nt1.27□□□□□ -2.21
YRF1-4O13559 YGR035CYGR035C 351 nt1.26□□□□□ -2.21
YRF1-4O13559 PRP16YKR086W 3216 nt1.26□□□□□ -2.21
YRF1-4O13559 NST1YNL091W 3723 nt1.26□□□□□ -2.21
YRF1-4O13559 EAF1YDR359C 2949 nt1.25□□□□□ -2.21
YRF1-4O13559 SET3YKR029C 2256 nt1.25□□□□□ -2.21
YRF1-4O13559 PCC1YKR095W-A 267 nt1.25□□□□□ -2.21
YRF1-4O13559 YLL020CYLL020C 306 nt1.25□□□□□ -2.21
YRF1-4O13559 YOL014WYOL014W 375 nt1.24□□□□□ -2.21
YRF1-4O13559 PDE2YOR360C 1581 nt1.24□□□□□ -2.21
YRF1-4O13559 STB6YKL072W 2301 nt1.24□□□□□ -2.21
YRF1-4O13559 YDR426CYDR426C 378 nt1.23□□□□□ -2.21
YRF1-4O13559 CUL3YGR003W 2235 nt1.23□□□□□ -2.21
YRF1-4O13559 GPG1YGL121C 381 nt1.22□□□□□ -2.21
YRF1-4O13559 MAM33YIL070C 801 nt1.22□□□□□ -2.21
YRF1-4O13559 BIL1YOR304C-A 231 nt1.22□□□□□ -2.21
YRF1-4O13559 YBR200W-AYBR200W-A 165 nt1.22□□□□□ -2.21
YRF1-4O13559 YBR221W-AYBR221W-A 105 nt1.21□□□□□ -2.21
YRF1-4O13559 SLD3YGL113W 2007 nt1.21□□□□□ -2.22
YRF1-4O13559 STO1YMR125W 2586 nt1.21□□□□□ -2.22
YRF1-4O13559 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
YRF1-4O13559 PKH2YOL100W 3246 nt1.2□□□□□ -2.22
YRF1-4O13559 CSN9YDR179C 489 nt1.19□□□□□ -2.22
YRF1-4O13559 APL1YJR005W 2103 nt1.19□□□□□ -2.22
YRF1-4O13559 PTP2YOR208W 2253 nt1.18□□□□□ -2.22
YRF1-4O13559 YHL046W-AYHL046W-A 327 nt1.18□□□□□ -2.22
YRF1-4O13559 YJR011CYJR011C 786 nt1.18□□□□□ -2.22
YRF1-4O13559 YDL206WYDL206W 2289 nt1.17□□□□□ -2.22
YRF1-4O13559 HTB2YBL002W 396 nt1.16□□□□□ -2.22
YRF1-4O13559 YLL007CYLL007C 1998 nt1.16□□□□□ -2.22
YRF1-4O13559 YHL042WYHL042W 453 nt1.15□□□□□ -2.23
YRF1-4O13559 YHR007C-AYHR007C-A 216 nt1.15□□□□□ -2.23
YRF1-4O13559 YLR334CYLR334C 381 nt1.15□□□□□ -2.23
YRF1-4O13559 YBL008W-AYBL008W-A 240 nt1.15□□□□□ -2.23
YRF1-4O13559 YMR321CYMR321C 318 nt1.15□□□□□ -2.23
YRF1-4O13559 KAP120YPL125W 3099 nt1.13□□□□□ -2.23
YRF1-4O13559 tW(UCA)QtW(UCA)Q 74 nt1.13□□□□□ -2.23
YRF1-4O13559 YMR160WYMR160W 2451 nt1.12□□□□□ -2.23
YRF1-4O13559 YDR521WYDR521W 336 nt1.12□□□□□ -2.23
YRF1-4O13559 RPL35AYDL191W 363 nt1.11□□□□□ -2.23
YRF1-4O13559 YPR016W-AYPR016W-A 261 nt1.11□□□□□ -2.23
YRF1-4O13559 HMRA2YCR096C 360 nt1.1□□□□□ -2.23
YRF1-4O13559 WAR1YML076C 2835 nt1.1□□□□□ -2.23
YRF1-4O13559 YKL145W-AYKL145W-A 93 nt1.09□□□□□ -2.23
YRF1-4O13559 YOR192C-BYOR192C-B 5313 nt1.08□□□□□ -2.24
YRF1-4O13559 YAR029WYAR029W 225 nt1.08□□□□□ -2.24
YRF1-4O13559 TAR1YLR154W-C 375 nt1.08□□□□□ -2.24
YRF1-4O13559 YPR197CYPR197C 564 nt1.08□□□□□ -2.24
YRF1-4O13559 YBR206WYBR206W 324 nt1.08□□□□□ -2.24
YRF1-4O13559 NHP2YDL208W 471 nt1.06□□□□□ -2.24
YRF1-4O13559 ISD11YER048W-A 285 nt1.05□□□□□ -2.24
YRF1-4O13559 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
YRF1-4O13559 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
YRF1-4O13559 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
YRF1-4O13559 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
YRF1-4O13559 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
YRF1-4O13559 YBR064WYBR064W 429 nt1.02□□□□□ -2.25
YRF1-4O13559 YJL120WYJL120W 324 nt1.01□□□□□ -2.25
YRF1-4O13559 RPS25BYLR333C 327 nt1.01□□□□□ -2.25
YRF1-4O13559 YOR282WYOR282W 321 nt1.01□□□□□ -2.25
YRF1-4O13559 YPL038W-AYPL038W-A 192 nt1.01□□□□□ -2.25
YRF1-4O13559 ULP2YIL031W 3105 nt1.01□□□□□ -2.25
YRF1-4O13559 HMRA1YCR097W 381 nt1□□□□□ -2.25
YRF1-4O13559 YDR102CYDR102C 333 nt1□□□□□ -2.25
YRF1-4O13559 UTP8YGR128C 2142 nt1□□□□□ -2.25
YRF1-4O13559 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
YRF1-4O13559 YDR048CYDR048C 315 nt0.99□□□□□ -2.25
YRF1-4O13559 YDL240C-AYDL240C-A 138 nt0.98□□□□□ -2.25
YRF1-4O13559 tT(AGU)BtT(AGU)B 73 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms