Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 AA414768-201ENSMUST00000121924 1257 ntBASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm6345-202ENSMUST00000180900 204 ntBASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-39A0A0G2JDV4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms