Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm5058-201ENSMUST00000187331 463 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm43491-201ENSMUST00000197133 784 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm19366-201ENSMUST00000206996 156 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col4a4Q9QZR9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm11830-201ENSMUST00000120175 561 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm12222-201ENSMUST00000121368 260 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm25048-201ENSMUST00000158598 91 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm44526-201ENSMUST00000204664 121 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm24914-201ENSMUST00000157285 313 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm22849-201ENSMUST00000157713 307 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm25866-201ENSMUST00000158245 112 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm19126-201ENSMUST00000207896 509 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Gm18441-201ENSMUST00000223539 617 ntBASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col4a4Q9QZR9 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm22674-201ENSMUST00000104413 131 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm27160-201ENSMUST00000184837 199 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm18692-201ENSMUST00000193047 511 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm43227-201ENSMUST00000202239 677 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Col4a4Q9QZR9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm11448-201ENSMUST00000120427 450 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm11456-201ENSMUST00000121070 256 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm11260-201ENSMUST00000121163 942 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm27505-201ENSMUST00000185071 110 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm5368-201ENSMUST00000189012 589 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm44869-201ENSMUST00000208836 357 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 Gm19181-201ENSMUST00000218891 940 ntBASIC3.34□□□□□ -1.87
Col4a4Q9QZR9 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms