Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm25315-201ENSMUST00000116823 121 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm14304-201ENSMUST00000117272 446 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm15312-201ENSMUST00000118827 271 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm15309-201ENSMUST00000121644 240 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm25185-201ENSMUST00000157754 96 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm17155-201ENSMUST00000165969 473 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm28094-201ENSMUST00000185262 390 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm28779-201ENSMUST00000189678 323 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm19777-201ENSMUST00000191940 358 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm44990-201ENSMUST00000203922 217 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm18997-201ENSMUST00000216353 822 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Mir421-201ENSMUST00000083575 76 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.82□□□□□ -1.64
Trim9Q8C7M3 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm11878-201ENSMUST00000117908 400 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm2318-201ENSMUST00000119623 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm11512-201ENSMUST00000119669 663 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm11344-201ENSMUST00000122011 335 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm24402-201ENSMUST00000157873 91 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm22536-201ENSMUST00000158171 134 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7438-201ENSMUST00000177664 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7408-201ENSMUST00000178014 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7386-201ENSMUST00000178020 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm3657-201ENSMUST00000178170 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7415-201ENSMUST00000178205 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7398-201ENSMUST00000178589 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7391-201ENSMUST00000178680 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm7375-201ENSMUST00000179232 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm3681-201ENSMUST00000179940 639 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm38329-201ENSMUST00000193473 427 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm42579-201ENSMUST00000200512 734 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm44910-201ENSMUST00000208451 396 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm45316-201ENSMUST00000210128 162 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm5176-202ENSMUST00000220267 583 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Mecom-201ENSMUST00000061088 348 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Gm23623-201ENSMUST00000082461 107 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim9Q8C7M3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim9Q8C7M3 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Trim9Q8C7M3 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms