Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm13650-201ENSMUST00000117729 433 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm22852-201ENSMUST00000177899 101 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm28094-201ENSMUST00000185262 390 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm28803-201ENSMUST00000190385 764 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm43355-201ENSMUST00000196541 346 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm8874-201ENSMUST00000196826 286 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm44972-201ENSMUST00000206419 406 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm14714-201ENSMUST00000119743 439 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm14581-201ENSMUST00000121726 198 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm22722-201ENSMUST00000157467 132 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm22833-201ENSMUST00000158292 132 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm16566-201ENSMUST00000160387 910 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm15795-201ENSMUST00000160969 553 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm21999-201ENSMUST00000165985 387 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm2979-201ENSMUST00000193442 463 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm24350-202ENSMUST00000198309 132 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm8989-201ENSMUST00000184782 7275 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm22664-201ENSMUST00000158719 105 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm29259-201ENSMUST00000186396 694 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm28255-201ENSMUST00000187101 694 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm29545-201ENSMUST00000188878 694 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 CT009754.4-201ENSMUST00000221430 565 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm25007-201ENSMUST00000083808 133 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.49□□□□□ -1.85
Col4a4Q9QZR9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm11893-201ENSMUST00000117829 491 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm14926-201ENSMUST00000120650 508 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm25707-201ENSMUST00000175120 96 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm20561-201ENSMUST00000188131 292 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm42593-201ENSMUST00000198469 377 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 AC154618.1-201ENSMUST00000227451 303 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.48□□□□□ -1.85
Col4a4Q9QZR9 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col4a4Q9QZR9 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.47□□□□□ -1.85
Col4a4Q9QZR9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 208 ms