Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm12722-201ENSMUST00000118507 493 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm14162-201ENSMUST00000121985 601 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm24734-201ENSMUST00000158860 262 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Mir8090-201ENSMUST00000185078 136 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm28660-201ENSMUST00000186496 253 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm29105-201ENSMUST00000187256 450 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm6303-201ENSMUST00000210123 471 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm6841-201ENSMUST00000220602 598 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm37814-201ENSMUST00000195820 3644 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col4a4Q9QZR9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm18520-201ENSMUST00000174783 658 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm32340-201ENSMUST00000192883 259 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm25203-202ENSMUST00000200458 216 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm34005-201ENSMUST00000215834 282 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm25203-201ENSMUST00000082842 215 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Snord7-201ENSMUST00000083781 97 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm42583-201ENSMUST00000202678 6700 ntBASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col4a4Q9QZR9 Gm22939-201ENSMUST00000103958 131 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm26215-201ENSMUST00000158584 139 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm22859-201ENSMUST00000174978 122 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm28069-201ENSMUST00000189926 214 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm6510-201ENSMUST00000195916 574 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm19596-201ENSMUST00000203685 739 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 AC127371.1-201ENSMUST00000228516 312 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm13504-201ENSMUST00000117490 316 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm19891-201ENSMUST00000189771 303 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm43717-201ENSMUST00000198684 310 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms