Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.26■□□□□ 0.51
Znf235Q61116 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Znf235Q61116 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Znf235Q61116 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.25■□□□□ 0.51
Znf235Q61116 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Znf235Q61116 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Znf235Q61116 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
Znf235Q61116 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Znf235Q61116 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Znf235Q61116 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 AA414768-201ENSMUST00000121924 1257 ntBASIC18.24■□□□□ 0.51
Znf235Q61116 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.24■□□□□ 0.51
Znf235Q61116 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.24■□□□□ 0.51
Znf235Q61116 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Znf235Q61116 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Znf235Q61116 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
Znf235Q61116 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.23■□□□□ 0.51
Znf235Q61116 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Znf235Q61116 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.23■□□□□ 0.51
Znf235Q61116 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.23■□□□□ 0.51
Znf235Q61116 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Znf235Q61116 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Actl10-202ENSMUST00000226583 1501 ntBASIC18.23■□□□□ 0.51
Znf235Q61116 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Znf235Q61116 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.22■□□□□ 0.51
Znf235Q61116 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.22■□□□□ 0.51
Znf235Q61116 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Znf235Q61116 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.22■□□□□ 0.51
Znf235Q61116 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Znf235Q61116 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Znf235Q61116 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.22■□□□□ 0.51
Znf235Q61116 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Znf235Q61116 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Znf235Q61116 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.21■□□□□ 0.51
Znf235Q61116 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Znf235Q61116 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Znf235Q61116 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Znf235Q61116 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Znf235Q61116 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.21■□□□□ 0.5
Znf235Q61116 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Znf235Q61116 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Znf235Q61116 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Znf235Q61116 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.2■□□□□ 0.5
Znf235Q61116 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms