Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43aQ3TL54 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43aQ3TL54 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43aQ3TL54 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Gm29257-201ENSMUST00000186115 639 ntBASIC18.46■□□□□ 0.55
Trim43aQ3TL54 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.46■□□□□ 0.55
Trim43aQ3TL54 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43aQ3TL54 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm7290-201ENSMUST00000104990 617 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm12918-201ENSMUST00000120234 636 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm15710-201ENSMUST00000121821 636 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm38285-201ENSMUST00000192928 922 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm5075-201ENSMUST00000196916 622 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43aQ3TL54 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43aQ3TL54 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms