Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 TRS65YGR166W 1683 nt0.24□□□□□ -2.37
RFU1Q08003 PHS1YJL097W 654 nt0.23□□□□□ -2.37
RFU1Q08003 NPR2YEL062W 1848 nt0.22□□□□□ -2.37
RFU1Q08003 RPL9AYGL147C 576 nt0.22□□□□□ -2.37
RFU1Q08003 YGL230CYGL230C 444 nt0.22□□□□□ -2.37
RFU1Q08003 YIL134C-AYIL134C-A 204 nt0.22□□□□□ -2.37
RFU1Q08003 YJR079WYJR079W 330 nt0.22□□□□□ -2.37
RFU1Q08003 GMC2YLR445W 567 nt0.22□□□□□ -2.37
RFU1Q08003 RFX1YLR176C 2436 nt0.22□□□□□ -2.37
RFU1Q08003 PMP1YCR024C-A 123 nt0.21□□□□□ -2.38
RFU1Q08003 YER076W-AYER076W-A 348 nt0.21□□□□□ -2.38
RFU1Q08003 YOR248WYOR248W 303 nt0.21□□□□□ -2.38
RFU1Q08003 PPN1YDR452W 2025 nt0.2□□□□□ -2.38
RFU1Q08003 YEL030C-AYEL030C-A 315 nt0.2□□□□□ -2.38
RFU1Q08003 RPS24BYIL069C 408 nt0.2□□□□□ -2.38
RFU1Q08003 YOL014WYOL014W 375 nt0.2□□□□□ -2.38
RFU1Q08003 GPG1YGL121C 381 nt0.19□□□□□ -2.38
RFU1Q08003 RPL26BYGR034W 384 nt0.19□□□□□ -2.38
RFU1Q08003 SPO11YHL022C 1197 nt0.19□□□□□ -2.38
RFU1Q08003 NOP9YJL010C 2001 nt0.19□□□□□ -2.38
RFU1Q08003 STE5YDR103W 2754 nt0.19□□□□□ -2.38
RFU1Q08003 YNL054W-BYNL054W-B 5250 nt0.19□□□□□ -2.38
RFU1Q08003 SBH1YER087C-B 249 nt0.18□□□□□ -2.38
RFU1Q08003 QCR9YGR183C 201 nt0.18□□□□□ -2.38
RFU1Q08003 YHL042WYHL042W 453 nt0.18□□□□□ -2.38
RFU1Q08003 LOA1YPR139C 903 nt0.18□□□□□ -2.38
RFU1Q08003 YCL002CYCL002C 792 nt0.18□□□□□ -2.38
RFU1Q08003 MRPL32YCR003W 552 nt0.17□□□□□ -2.38
RFU1Q08003 snR9snR9 187 nt0.17□□□□□ -2.38
RFU1Q08003 YMR254CYMR254C 309 nt0.17□□□□□ -2.38
RFU1Q08003 YOR032W-AYOR032W-A 201 nt0.17□□□□□ -2.38
RFU1Q08003 YDR344CYDR344C 444 nt0.16□□□□□ -2.38
RFU1Q08003 YGR290WYGR290W 444 nt0.16□□□□□ -2.38
RFU1Q08003 RPL26AYLR344W 384 nt0.16□□□□□ -2.38
RFU1Q08003 ZIP2YGL249W 2115 nt0.16□□□□□ -2.38
RFU1Q08003 PAU12YGR294W 363 nt0.15□□□□□ -2.39
RFU1Q08003 YLR252WYLR252W 306 nt0.15□□□□□ -2.39
RFU1Q08003 YDR269CYDR269C 324 nt0.14□□□□□ -2.39
RFU1Q08003 MND1YGL183C 660 nt0.14□□□□□ -2.39
RFU1Q08003 ILM1YJR118C 612 nt0.14□□□□□ -2.39
RFU1Q08003 MRPS8YMR158W 468 nt0.14□□□□□ -2.39
RFU1Q08003 RCN2YOR220W 798 nt0.14□□□□□ -2.39
RFU1Q08003 BEM3YPL115C 3387 nt0.14□□□□□ -2.39
RFU1Q08003 SCEIQ0160 708 nt0.13□□□□□ -2.39
RFU1Q08003 YBR063CYBR063C 1215 nt0.13□□□□□ -2.39
RFU1Q08003 UBC7YMR022W 498 nt0.12□□□□□ -2.39
RFU1Q08003 CDC33YOL139C 642 nt0.12□□□□□ -2.39
RFU1Q08003 YOR108C-AYOR108C-A 210 nt0.12□□□□□ -2.39
RFU1Q08003 MLP1YKR095W 5628 nt0.11□□□□□ -2.39
RFU1Q08003 PKH2YOL100W 3246 nt0.11□□□□□ -2.39
RFU1Q08003 AFB1YLR040C 675 nt0.11□□□□□ -2.39
RFU1Q08003 YPR039WYPR039W 336 nt0.11□□□□□ -2.39
RFU1Q08003 AFR1YDR085C 1863 nt0.1□□□□□ -2.39
RFU1Q08003 YJL127W-AYJL127W-A 117 nt0.1□□□□□ -2.39
RFU1Q08003 BSC3YLR465C 309 nt0.1□□□□□ -2.39
RFU1Q08003 YMR290W-AYMR290W-A 348 nt0.1□□□□□ -2.39
RFU1Q08003 YOL013W-AYOL013W-A 192 nt0.1□□□□□ -2.39
RFU1Q08003 PET111YMR257C 2403 nt0.1□□□□□ -2.39
RFU1Q08003 THO2YNL139C 4794 nt0.1□□□□□ -2.39
RFU1Q08003 YDL187CYDL187C 330 nt0.09□□□□□ -2.4
RFU1Q08003 YJL135WYJL135W 318 nt0.09□□□□□ -2.4
RFU1Q08003 ECM9YKR004C 1134 nt0.09□□□□□ -2.4
RFU1Q08003 YPL044CYPL044C 549 nt0.09□□□□□ -2.4
RFU1Q08003 IRC16YPR038W 360 nt0.09□□□□□ -2.4
RFU1Q08003 YOR192C-BYOR192C-B 5313 nt0.09□□□□□ -2.4
RFU1Q08003 APQ13YJL075C 417 nt0.08□□□□□ -2.4
RFU1Q08003 EFR3YMR212C 2349 nt0.07□□□□□ -2.4
RFU1Q08003 YCR100CYCR100C 951 nt0.07□□□□□ -2.4
RFU1Q08003 YGL239CYGL239C 315 nt0.07□□□□□ -2.4
RFU1Q08003 FYV10YIL097W 1551 nt0.06□□□□□ -2.4
RFU1Q08003 YER175W-AYER175W-A 165 nt0.06□□□□□ -2.4
RFU1Q08003 YOL038C-AYOL038C-A 96 nt0.06□□□□□ -2.4
RFU1Q08003 VIK1YPL253C 1944 nt0.06□□□□□ -2.4
RFU1Q08003 BIG1YHR101C 1008 nt0.05□□□□□ -2.4
RFU1Q08003 YJR087WYJR087W 351 nt0.05□□□□□ -2.4
RFU1Q08003 YER078W-AYER078W-A 165 nt0.04□□□□□ -2.4
RFU1Q08003 YNL050CYNL050C 813 nt0.04□□□□□ -2.4
RFU1Q08003 YBL100W-BYBL100W-B 5313 nt0.04□□□□□ -2.4
RFU1Q08003 MPC1YGL080W 393 nt0.03□□□□□ -2.4
RFU1Q08003 YMR141W-AYMR141W-A 225 nt0.03□□□□□ -2.4
RFU1Q08003 INP2YMR163C 2118 nt0.03□□□□□ -2.4
RFU1Q08003 RPB10YOR210W 213 nt0.03□□□□□ -2.4
RFU1Q08003 YER135CYER135C 393 nt0.02□□□□□ -2.41
RFU1Q08003 VMA21YGR105W 234 nt0.02□□□□□ -2.41
RFU1Q08003 COX12YLR038C 252 nt0.02□□□□□ -2.41
RFU1Q08003 YOL160WYOL160W 342 nt0.02□□□□□ -2.41
RFU1Q08003 YAL066WYAL066W 309 nt0.01□□□□□ -2.41
RFU1Q08003 YBR064WYBR064W 429 nt0.01□□□□□ -2.41
RFU1Q08003 YBR076C-AYBR076C-A 267 nt0.01□□□□□ -2.41
RFU1Q08003 MCM10YIL150C 1716 nt0.01□□□□□ -2.41
RFU1Q08003 HUR1YGL168W 333 nt0□□□□□ -2.41
RFU1Q08003 RPS27AYKL156W 249 nt0□□□□□ -2.41
RFU1Q08003 YMR321CYMR321C 318 nt0□□□□□ -2.41
RFU1Q08003 ESP1YGR098C 4893 nt-0□□□□□ -2.41
RFU1Q08003 CUL3YGR003W 2235 nt-0.01□□□□□ -2.41
RFU1Q08003 YDR029WYDR029W 315 nt-0.01□□□□□ -2.41
RFU1Q08003 OLI1Q0130 231 nt-0.01□□□□□ -2.41
RFU1Q08003 YIL029CYIL029C 429 nt-0.01□□□□□ -2.41
RFU1Q08003 YLR198CYLR198C 360 nt-0.01□□□□□ -2.41
RFU1Q08003 YBL008W-AYBL008W-A 240 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 45.1 ms