Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 ELG1YOR144C 2376 nt2.37□□□□□ -2.03
SSL1Q04673 CLN3YAL040C 1743 nt2.37□□□□□ -2.03
SSL1Q04673 KTI11YBL071W-A 249 nt2.36□□□□□ -2.03
SSL1Q04673 PHO91YNR013C 2685 nt2.36□□□□□ -2.03
SSL1Q04673 SPC98YNL126W 2541 nt2.36□□□□□ -2.03
SSL1Q04673 VPS13YLL040C 9435 nt2.36□□□□□ -2.03
SSL1Q04673 MET18YIL128W 3099 nt2.35□□□□□ -2.03
SSL1Q04673 SEC16YPL085W 6588 nt2.35□□□□□ -2.03
SSL1Q04673 ECM12YHR021W-A 456 nt2.35□□□□□ -2.03
SSL1Q04673 ANS1YHR126C 480 nt2.35□□□□□ -2.03
SSL1Q04673 VPS8YAL002W 3825 nt2.35□□□□□ -2.03
SSL1Q04673 DCP2YNL118C 2913 nt2.35□□□□□ -2.03
SSL1Q04673 PUT3YKL015W 2940 nt2.35□□□□□ -2.03
SSL1Q04673 MNE1YOR350C 1992 nt2.34□□□□□ -2.03
SSL1Q04673 ZRG17YNR039C 1818 nt2.34□□□□□ -2.03
SSL1Q04673 LRE1YCL051W 1752 nt2.33□□□□□ -2.04
SSL1Q04673 MSB1YOR188W 3414 nt2.33□□□□□ -2.04
SSL1Q04673 YPR097WYPR097W 3222 nt2.33□□□□□ -2.04
SSL1Q04673 ZIP1YDR285W 2628 nt2.33□□□□□ -2.04
SSL1Q04673 YOR108C-AYOR108C-A 210 nt2.33□□□□□ -2.04
SSL1Q04673 YBR131C-AYBR131C-A 90 nt2.33□□□□□ -2.04
SSL1Q04673 YCL046WYCL046W 324 nt2.33□□□□□ -2.04
SSL1Q04673 SAS3YBL052C 2496 nt2.32□□□□□ -2.04
SSL1Q04673 SCD5YOR329C 2619 nt2.32□□□□□ -2.04
SSL1Q04673 YLR154W-AYLR154W-A 186 nt2.32□□□□□ -2.04
SSL1Q04673 snR52snR52 92 nt2.32□□□□□ -2.04
SSL1Q04673 NUP170YBL079W 4509 nt2.32□□□□□ -2.04
SSL1Q04673 SPO75YLL005C 2607 nt2.31□□□□□ -2.04
SSL1Q04673 YGR164WYGR164W 336 nt2.31□□□□□ -2.04
SSL1Q04673 RPL34BYIL052C 366 nt2.31□□□□□ -2.04
SSL1Q04673 YOR072W-BYOR072W-B 162 nt2.31□□□□□ -2.04
SSL1Q04673 YOR381W-AYOR381W-A 168 nt2.31□□□□□ -2.04
SSL1Q04673 YBR174CYBR174C 315 nt2.31□□□□□ -2.04
SSL1Q04673 YDR003W-AYDR003W-A 123 nt2.3□□□□□ -2.04
SSL1Q04673 TIM9YEL020W-A 264 nt2.3□□□□□ -2.04
SSL1Q04673 VTC1YER072W 390 nt2.3□□□□□ -2.04
SSL1Q04673 SCP160YJL080C 3669 nt2.29□□□□□ -2.04
SSL1Q04673 RLM1YPL089C 2031 nt2.29□□□□□ -2.04
SSL1Q04673 YMR242W-AYMR242W-A 90 nt2.29□□□□□ -2.04
SSL1Q04673 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
SSL1Q04673 SVL3YPL032C 2478 nt2.29□□□□□ -2.04
SSL1Q04673 NOP14YDL148C 2433 nt2.29□□□□□ -2.04
SSL1Q04673 ZIP2YGL249W 2115 nt2.29□□□□□ -2.04
SSL1Q04673 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
SSL1Q04673 YDR182W-AYDR182W-A 204 nt2.28□□□□□ -2.04
SSL1Q04673 RPS25BYLR333C 327 nt2.28□□□□□ -2.04
SSL1Q04673 RPS17AYML024W 411 nt2.28□□□□□ -2.04
SSL1Q04673 SPF1YEL031W 3648 nt2.27□□□□□ -2.05
SSL1Q04673 SPO21YOL091W 1830 nt2.27□□□□□ -2.05
SSL1Q04673 RAD34YDR314C 2079 nt2.27□□□□□ -2.05
SSL1Q04673 BRP1YGL007W 378 nt2.26□□□□□ -2.05
SSL1Q04673 YJL120WYJL120W 324 nt2.26□□□□□ -2.05
SSL1Q04673 NAM7YMR080C 2916 nt2.25□□□□□ -2.05
SSL1Q04673 SSD1YDR293C 3753 nt2.25□□□□□ -2.05
SSL1Q04673 APL5YPL195W 2799 nt2.25□□□□□ -2.05
SSL1Q04673 YEL073CYEL073C 324 nt2.25□□□□□ -2.05
SSL1Q04673 YHR180W-AYHR180W-A 183 nt2.25□□□□□ -2.05
SSL1Q04673 YIR044CYIR044C 186 nt2.25□□□□□ -2.05
SSL1Q04673 YKL165C-AYKL165C-A 234 nt2.25□□□□□ -2.05
SSL1Q04673 YOR161W-BYOR161W-B 261 nt2.25□□□□□ -2.05
SSL1Q04673 TOF1YNL273W 3717 nt2.25□□□□□ -2.05
SSL1Q04673 CSF1YLR087C 8877 nt2.24□□□□□ -2.05
SSL1Q04673 UBR1YGR184C 5853 nt2.24□□□□□ -2.05
SSL1Q04673 MAD1YGL086W 2250 nt2.24□□□□□ -2.05
SSL1Q04673 TRL1YJL087C 2484 nt2.24□□□□□ -2.05
SSL1Q04673 COF1YLL050C 432 nt2.24□□□□□ -2.05
SSL1Q04673 MLH1YMR167W 2310 nt2.24□□□□□ -2.05
SSL1Q04673 HSH155YMR288W 2916 nt2.24□□□□□ -2.05
SSL1Q04673 CDC60YPL160W 3273 nt2.23□□□□□ -2.05
SSL1Q04673 ATP7YKL016C 525 nt2.23□□□□□ -2.05
SSL1Q04673 NCA2YPR155C 1851 nt2.22□□□□□ -2.05
SSL1Q04673 APL2YKL135C 2181 nt2.22□□□□□ -2.05
SSL1Q04673 YDR341CYDR341C 1824 nt2.21□□□□□ -2.05
SSL1Q04673 NOC3YLR002C 1992 nt2.21□□□□□ -2.05
SSL1Q04673 PTP2YOR208W 2253 nt2.21□□□□□ -2.06
SSL1Q04673 ENV11YGR071C 2583 nt2.21□□□□□ -2.06
SSL1Q04673 CUL3YGR003W 2235 nt2.21□□□□□ -2.06
SSL1Q04673 YLL007CYLL007C 1998 nt2.21□□□□□ -2.06
SSL1Q04673 YLR035C-AYLR035C-A 3468 nt2.21□□□□□ -2.06
SSL1Q04673 IRC8YJL051W 2469 nt2.2□□□□□ -2.06
SSL1Q04673 PET309YLR067C 2898 nt2.2□□□□□ -2.06
SSL1Q04673 BNI1YNL271C 5862 nt2.2□□□□□ -2.06
SSL1Q04673 MLH3YPL164C 2148 nt2.2□□□□□ -2.06
SSL1Q04673 YNL205CYNL205C 423 nt2.2□□□□□ -2.06
SSL1Q04673 RPL33BYOR234C 324 nt2.2□□□□□ -2.06
SSL1Q04673 CAT2YML042W 2013 nt2.2□□□□□ -2.06
SSL1Q04673 BUD2YKL092C 3315 nt2.2□□□□□ -2.06
SSL1Q04673 HMI1YOL095C 2121 nt2.19□□□□□ -2.06
SSL1Q04673 YOR345CYOR345C 351 nt2.19□□□□□ -2.06
SSL1Q04673 RAV1YJR033C 4074 nt2.19□□□□□ -2.06
SSL1Q04673 TFC3YAL001C 3483 nt2.19□□□□□ -2.06
SSL1Q04673 RTT107YHR154W 3213 nt2.19□□□□□ -2.06
SSL1Q04673 SNU13YEL026W 381 nt2.18□□□□□ -2.06
SSL1Q04673 SAP190YKR028W 3102 nt2.18□□□□□ -2.06
SSL1Q04673 SYH1YPL105C 2550 nt2.18□□□□□ -2.06
SSL1Q04673 MSH5YDL154W 2706 nt2.18□□□□□ -2.06
SSL1Q04673 DNF1YER166W 4716 nt2.17□□□□□ -2.06
SSL1Q04673 AIM44YPL158C 2277 nt2.17□□□□□ -2.06
SSL1Q04673 CTR9YOL145C 3234 nt2.17□□□□□ -2.06
SSL1Q04673 DGR2YKL121W 2559 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 74.2 ms