Protein–RNA interactions for Protein: P53859

CSL4, Exosome complex component CSL4, yeastyeast

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSL4P53859 UTP21YLR409C 2820 nt1.79□□□□□ -2.12
CSL4P53859 DBP6YNR038W 1890 nt1.78□□□□□ -2.12
CSL4P53859 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
CSL4P53859 YMR193C-AYMR193C-A 387 nt1.77□□□□□ -2.13
CSL4P53859 ZIP2YGL249W 2115 nt1.76□□□□□ -2.13
CSL4P53859 AI5_ALPHAQ0070 1893 nt1.76□□□□□ -2.13
CSL4P53859 GCN2YDR283C 4980 nt1.76□□□□□ -2.13
CSL4P53859 HTL1YCR020W-B 237 nt1.76□□□□□ -2.13
CSL4P53859 snR65snR65 100 nt1.76□□□□□ -2.13
CSL4P53859 PAU2YEL049W 363 nt1.76□□□□□ -2.13
CSL4P53859 YER181CYER181C 324 nt1.76□□□□□ -2.13
CSL4P53859 YMR242W-AYMR242W-A 90 nt1.76□□□□□ -2.13
CSL4P53859 PIG1YLR273C 1947 nt1.76□□□□□ -2.13
CSL4P53859 YIL102CYIL102C 306 nt1.75□□□□□ -2.13
CSL4P53859 SDH2YLL041C 801 nt1.75□□□□□ -2.13
CSL4P53859 YMR272W-BYMR272W-B 108 nt1.75□□□□□ -2.13
CSL4P53859 SBE22YHR103W 2559 nt1.75□□□□□ -2.13
CSL4P53859 MYO2YOR326W 4725 nt1.75□□□□□ -2.13
CSL4P53859 YDR182W-AYDR182W-A 204 nt1.74□□□□□ -2.13
CSL4P53859 YOL160WYOL160W 342 nt1.74□□□□□ -2.13
CSL4P53859 YOR108C-AYOR108C-A 210 nt1.74□□□□□ -2.13
CSL4P53859 YOR231C-AYOR231C-A 201 nt1.74□□□□□ -2.13
CSL4P53859 ENV11YGR071C 2583 nt1.74□□□□□ -2.13
CSL4P53859 APL2YKL135C 2181 nt1.74□□□□□ -2.13
CSL4P53859 YIL032CYIL032C 357 nt1.72□□□□□ -2.13
CSL4P53859 MON2YNL297C 4911 nt1.72□□□□□ -2.13
CSL4P53859 TRM3YDL112W 4311 nt1.72□□□□□ -2.13
CSL4P53859 PIP2YOR363C 2991 nt1.72□□□□□ -2.13
CSL4P53859 ELG1YOR144C 2376 nt1.72□□□□□ -2.13
CSL4P53859 PEP1YBL017C 4740 nt1.72□□□□□ -2.13
CSL4P53859 VPS15YBR097W 4365 nt1.71□□□□□ -2.14
CSL4P53859 YDL211CYDL211C 1119 nt1.71□□□□□ -2.14
CSL4P53859 YIL115W-AYIL115W-A 372 nt1.71□□□□□ -2.14
CSL4P53859 YPR063CYPR063C 423 nt1.71□□□□□ -2.14
CSL4P53859 SEC5YDR166C 2916 nt1.7□□□□□ -2.14
CSL4P53859 RPL31AYDL075W 342 nt1.7□□□□□ -2.14
CSL4P53859 MAD1YGL086W 2250 nt1.69□□□□□ -2.14
CSL4P53859 OST1YJL002C 1431 nt1.69□□□□□ -2.14
CSL4P53859 YHR210CYHR210C 1026 nt1.69□□□□□ -2.14
CSL4P53859 YMR175W-AYMR175W-A 195 nt1.69□□□□□ -2.14
CSL4P53859 YPR010C-AYPR010C-A 219 nt1.69□□□□□ -2.14
CSL4P53859 TDA9YML081W 3756 nt1.69□□□□□ -2.14
CSL4P53859 RAD50YNL250W 3939 nt1.68□□□□□ -2.14
CSL4P53859 snR60snR60 104 nt1.68□□□□□ -2.14
CSL4P53859 SKI3YPR189W 4299 nt1.68□□□□□ -2.14
CSL4P53859 NOC3YLR002C 1992 nt1.68□□□□□ -2.14
CSL4P53859 PKH3YDR466W 2697 nt1.67□□□□□ -2.14
CSL4P53859 YHL042WYHL042W 453 nt1.67□□□□□ -2.14
CSL4P53859 YMR290W-AYMR290W-A 348 nt1.67□□□□□ -2.14
CSL4P53859 SPO24YPR036W-A 204 nt1.67□□□□□ -2.14
CSL4P53859 SPC98YNL126W 2541 nt1.67□□□□□ -2.14
CSL4P53859 NIP100YPL174C 2607 nt1.67□□□□□ -2.14
CSL4P53859 RAD34YDR314C 2079 nt1.67□□□□□ -2.14
CSL4P53859 SPT21YMR179W 2277 nt1.66□□□□□ -2.14
CSL4P53859 BRR2YER172C 6492 nt1.66□□□□□ -2.14
CSL4P53859 EMC5YIL027C 426 nt1.66□□□□□ -2.14
CSL4P53859 SMC4YLR086W 4257 nt1.66□□□□□ -2.14
CSL4P53859 YLR419WYLR419W 4308 nt1.65□□□□□ -2.15
CSL4P53859 SSS1YDR086C 243 nt1.65□□□□□ -2.15
CSL4P53859 ALG13YGL047W 609 nt1.65□□□□□ -2.15
CSL4P53859 YNL284C-BYNL284C-B 5268 nt1.65□□□□□ -2.15
CSL4P53859 CHS1YNL192W 3396 nt1.65□□□□□ -2.15
CSL4P53859 PAU12YGR294W 363 nt1.64□□□□□ -2.15
CSL4P53859 PAU24YBR301W 363 nt1.64□□□□□ -2.15
CSL4P53859 SCW11YGL028C 1629 nt1.64□□□□□ -2.15
CSL4P53859 RTP1YMR185W 2946 nt1.64□□□□□ -2.15
CSL4P53859 TBS1YBR150C 3285 nt1.64□□□□□ -2.15
CSL4P53859 UFD2YDL190C 2886 nt1.63□□□□□ -2.15
CSL4P53859 YCR022CYCR022C 345 nt1.63□□□□□ -2.15
CSL4P53859 YDR344CYDR344C 444 nt1.63□□□□□ -2.15
CSL4P53859 RPL34BYIL052C 366 nt1.63□□□□□ -2.15
CSL4P53859 COF1YLL050C 432 nt1.63□□□□□ -2.15
CSL4P53859 YCK3YER123W 1575 nt1.63□□□□□ -2.15
CSL4P53859 LCD1YDR499W 2244 nt1.62□□□□□ -2.15
CSL4P53859 YGL217CYGL217C 342 nt1.62□□□□□ -2.15
CSL4P53859 YGR069WYGR069W 336 nt1.62□□□□□ -2.15
CSL4P53859 YJL022WYJL022W 309 nt1.62□□□□□ -2.15
CSL4P53859 YOR376WYOR376W 369 nt1.62□□□□□ -2.15
CSL4P53859 NUP145YGL092W 3954 nt1.62□□□□□ -2.15
CSL4P53859 MPT5YGL178W 2580 nt1.62□□□□□ -2.15
CSL4P53859 SLI15YBR156C 2097 nt1.62□□□□□ -2.15
CSL4P53859 CUL3YGR003W 2235 nt1.61□□□□□ -2.15
CSL4P53859 YIR044CYIR044C 186 nt1.61□□□□□ -2.15
CSL4P53859 RAD61YDR014W 1944 nt1.61□□□□□ -2.15
CSL4P53859 COG8YML071C 1824 nt1.61□□□□□ -2.15
CSL4P53859 SLX4YLR135W 2247 nt1.6□□□□□ -2.15
CSL4P53859 YOR019WYOR019W 2193 nt1.6□□□□□ -2.15
CSL4P53859 YLR140WYLR140W 327 nt1.6□□□□□ -2.15
CSL4P53859 YOR282WYOR282W 321 nt1.6□□□□□ -2.15
CSL4P53859 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
CSL4P53859 COG4YPR105C 2586 nt1.59□□□□□ -2.15
CSL4P53859 VPS54YDR027C 2670 nt1.59□□□□□ -2.15
CSL4P53859 NCA2YPR155C 1851 nt1.59□□□□□ -2.15
CSL4P53859 YBL008W-AYBL008W-A 240 nt1.59□□□□□ -2.15
CSL4P53859 VIK1YPL253C 1944 nt1.59□□□□□ -2.15
CSL4P53859 ALK1YGL021W 2283 nt1.59□□□□□ -2.16
CSL4P53859 YGR130CYGR130C 2451 nt1.58□□□□□ -2.16
CSL4P53859 PKH2YOL100W 3246 nt1.58□□□□□ -2.16
CSL4P53859 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
CSL4P53859 HMRA2YCR096C 360 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms