Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 IPP1YBR011C 864 nt-1.54□□□□□ -2.66
HIR3P47171 NTC20YBR188C 423 nt-1.54□□□□□ -2.66
HIR3P47171 GIM5YML094W 492 nt-1.55□□□□□ -2.66
HIR3P47171 MMS21YEL019C 804 nt-1.56□□□□□ -2.66
HIR3P47171 SST2YLR452C 2097 nt-1.57□□□□□ -2.66
HIR3P47171 OST4YDL232W 111 nt-1.57□□□□□ -2.66
HIR3P47171 YGR115CYGR115C 780 nt-1.57□□□□□ -2.66
HIR3P47171 PRP21YJL203W 843 nt-1.57□□□□□ -2.66
HIR3P47171 POL32YJR043C 1053 nt-1.58□□□□□ -2.66
HIR3P47171 YLR282CYLR282C 342 nt-1.58□□□□□ -2.66
HIR3P47171 MRPL24YMR193W 777 nt-1.58□□□□□ -2.66
HIR3P47171 YNR021WYNR021W 1215 nt-1.58□□□□□ -2.66
HIR3P47171 NUP82YJL061W 2142 nt-1.59□□□□□ -2.66
HIR3P47171 ZIP1YDR285W 2628 nt-1.62□□□□□ -2.67
HIR3P47171 RPL42BYHR141C 321 nt-1.62□□□□□ -2.67
HIR3P47171 YKL023C-AYKL023C-A 228 nt-1.62□□□□□ -2.67
HIR3P47171 GPG1YGL121C 381 nt-1.62□□□□□ -2.67
HIR3P47171 YML007C-AYML007C-A 111 nt-1.62□□□□□ -2.67
HIR3P47171 YPL044CYPL044C 549 nt-1.63□□□□□ -2.67
HIR3P47171 EST1YLR233C 2100 nt-1.64□□□□□ -2.67
HIR3P47171 RTC6YPL183W-A 282 nt-1.66□□□□□ -2.68
HIR3P47171 tA(UGC)QtA(UGC)Q 76 nt-1.68□□□□□ -2.68
HIR3P47171 YIL071W-AYIL071W-A 477 nt-1.68□□□□□ -2.68
HIR3P47171 ATC1YDR184C 885 nt-1.69□□□□□ -2.68
HIR3P47171 TAR1YLR154W-C 375 nt-1.69□□□□□ -2.68
HIR3P47171 YOL166W-AYOL166W-A 156 nt-1.69□□□□□ -2.68
HIR3P47171 IST3YIR005W 447 nt-1.7□□□□□ -2.68
HIR3P47171 YBR121C-AYBR121C-A 159 nt-1.71□□□□□ -2.68
HIR3P47171 GIC2YDR309C 1152 nt-1.72□□□□□ -2.68
HIR3P47171 YHR054CYHR054C 1065 nt-1.72□□□□□ -2.68
HIR3P47171 YPR160W-AYPR160W-A 81 nt-1.72□□□□□ -2.68
HIR3P47171 snR44snR44 211 nt-1.72□□□□□ -2.68
HIR3P47171 YDL009CYDL009C 324 nt-1.73□□□□□ -2.69
HIR3P47171 IRC2YDR112W 309 nt-1.73□□□□□ -2.69
HIR3P47171 YJR079WYJR079W 330 nt-1.73□□□□□ -2.69
HIR3P47171 YOL118CYOL118C 309 nt-1.73□□□□□ -2.69
HIR3P47171 YBR184WYBR184W 1572 nt-1.74□□□□□ -2.69
HIR3P47171 YGL123C-AYGL123C-A 231 nt-1.74□□□□□ -2.69
HIR3P47171 YMR075C-AYMR075C-A 366 nt-1.74□□□□□ -2.69
HIR3P47171 YPL185WYPL185W 396 nt-1.74□□□□□ -2.69
HIR3P47171 YDL007C-AYDL007C-A 258 nt-1.75□□□□□ -2.69
HIR3P47171 CMC1YKL137W 336 nt-1.75□□□□□ -2.69
HIR3P47171 YDR182W-AYDR182W-A 204 nt-1.76□□□□□ -2.69
HIR3P47171 VAB2YEL005C 849 nt-1.76□□□□□ -2.69
HIR3P47171 YLR287CYLR287C 1068 nt-1.76□□□□□ -2.69
HIR3P47171 YOR248WYOR248W 303 nt-1.76□□□□□ -2.69
HIR3P47171 SPO21YOL091W 1830 nt-1.76□□□□□ -2.69
HIR3P47171 YNL319WYNL319W 441 nt-1.77□□□□□ -2.69
HIR3P47171 YFL063WYFL063W 456 nt-1.77□□□□□ -2.69
HIR3P47171 PCL2YDL127W 927 nt-1.78□□□□□ -2.69
HIR3P47171 SEM1YDR363W-A 270 nt-1.78□□□□□ -2.69
HIR3P47171 PFS1YHR185C 714 nt-1.78□□□□□ -2.69
HIR3P47171 AI4Q0065 1671 nt-1.79□□□□□ -2.7
HIR3P47171 MRPL25YGR076C 474 nt-1.79□□□□□ -2.7
HIR3P47171 BI3Q0115 1554 nt-1.79□□□□□ -2.7
HIR3P47171 YHR028W-AYHR028W-A 321 nt-1.8□□□□□ -2.7
HIR3P47171 YMR141W-AYMR141W-A 225 nt-1.8□□□□□ -2.7
HIR3P47171 AEP1YMR064W 1557 nt-1.8□□□□□ -2.7
HIR3P47171 YLR399W-AYLR399W-A 105 nt-1.8□□□□□ -2.7
HIR3P47171 BLS1YLR408C 369 nt-1.8□□□□□ -2.7
HIR3P47171 RTR2YDR066C 591 nt-1.81□□□□□ -2.7
HIR3P47171 BI4Q0120 1917 nt-1.81□□□□□ -2.7
HIR3P47171 YDR194W-AYDR194W-A 153 nt-1.82□□□□□ -2.7
HIR3P47171 YFR057WYFR057W 456 nt-1.82□□□□□ -2.7
HIR3P47171 APQ13YJL075C 417 nt-1.83□□□□□ -2.7
HIR3P47171 YHR138CYHR138C 345 nt-1.84□□□□□ -2.7
HIR3P47171 PHO80YOL001W 882 nt-1.84□□□□□ -2.7
HIR3P47171 YER079WYER079W 633 nt-1.86□□□□□ -2.71
HIR3P47171 YIL066W-AYIL066W-A 444 nt-1.86□□□□□ -2.71
HIR3P47171 BET4YJL031C 984 nt-1.86□□□□□ -2.71
HIR3P47171 SUS1YBR111W-A 291 nt-1.86□□□□□ -2.71
HIR3P47171 YIL032CYIL032C 357 nt-1.87□□□□□ -2.71
HIR3P47171 ATX1YNL259C 222 nt-1.88□□□□□ -2.71
HIR3P47171 QCR7YDR529C 384 nt-1.89□□□□□ -2.71
HIR3P47171 YGL258W-AYGL258W-A 234 nt-1.91□□□□□ -2.71
HIR3P47171 ECL1YGR146C 636 nt-1.91□□□□□ -2.72
HIR3P47171 YHR131W-AYHR131W-A 246 nt-1.91□□□□□ -2.72
HIR3P47171 TDA2YER071C 381 nt-1.92□□□□□ -2.72
HIR3P47171 RFA3YJL173C 369 nt-1.92□□□□□ -2.72
HIR3P47171 YLL006W-AYLL006W-A 177 nt-1.92□□□□□ -2.72
HIR3P47171 YBR064WYBR064W 429 nt-1.92□□□□□ -2.72
HIR3P47171 tP(UGG)QtP(UGG)Q 72 nt-1.94□□□□□ -2.72
HIR3P47171 ARV1YLR242C 966 nt-1.94□□□□□ -2.72
HIR3P47171 ATG31YDR022C 591 nt-1.95□□□□□ -2.72
HIR3P47171 YER046W-AYER046W-A 330 nt-1.99□□□□□ -2.73
HIR3P47171 YBL062WYBL062W 381 nt-1.99□□□□□ -2.73
HIR3P47171 ATP15YPL271W 189 nt-1.99□□□□□ -2.73
HIR3P47171 YDL068WYDL068W 330 nt-1.99□□□□□ -2.73
HIR3P47171 YHL048C-AYHL048C-A 135 nt-1.99□□□□□ -2.73
HIR3P47171 tY(GUA)QtY(GUA)Q 84 nt-1.99□□□□□ -2.73
HIR3P47171 YKE2YLR200W 345 nt-1.99□□□□□ -2.73
HIR3P47171 MFA2YNL145W 117 nt-1.99□□□□□ -2.73
HIR3P47171 YOR161W-AYOR161W-A 81 nt-1.99□□□□□ -2.73
HIR3P47171 PAA1YDR071C 576 nt-2□□□□□ -2.73
HIR3P47171 COX8YLR395C 237 nt-2□□□□□ -2.73
HIR3P47171 YBL039C-AYBL039C-A 84 nt-2□□□□□ -2.73
HIR3P47171 UBS1YBR165W 834 nt-2□□□□□ -2.73
HIR3P47171 RPF1YHR088W 888 nt-2.01□□□□□ -2.73
HIR3P47171 YJL077W-AYJL077W-A 87 nt-2.02□□□□□ -2.73
HIR3P47171 APQ12YIL040W 417 nt-2.03□□□□□ -2.73
Retrieved 100 of 7,029 protein–RNA pairs in 87.3 ms