Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 HCH1YNL281W 462 nt0.97□□□□□ -2.25
CDC40P40968 DIE2YGR227W 1578 nt0.96□□□□□ -2.26
CDC40P40968 YDL011CYDL011C 324 nt0.96□□□□□ -2.26
CDC40P40968 YMR242W-AYMR242W-A 90 nt0.96□□□□□ -2.26
CDC40P40968 AIM9YER080W 1884 nt0.96□□□□□ -2.26
CDC40P40968 MSH3YCR092C 3057 nt0.95□□□□□ -2.26
CDC40P40968 RPL34BYIL052C 366 nt0.95□□□□□ -2.26
CDC40P40968 YJL020W-AYJL020W-A 258 nt0.95□□□□□ -2.26
CDC40P40968 YKL202WYKL202W 582 nt0.95□□□□□ -2.26
CDC40P40968 RIM20YOR275C 1986 nt0.95□□□□□ -2.26
CDC40P40968 VAM6YDL077C 3150 nt0.95□□□□□ -2.26
CDC40P40968 CDC39YCR093W 6327 nt0.95□□□□□ -2.26
CDC40P40968 PDE2YOR360C 1581 nt0.95□□□□□ -2.26
CDC40P40968 SLD3YGL113W 2007 nt0.94□□□□□ -2.26
CDC40P40968 RTT102YGR275W 474 nt0.94□□□□□ -2.26
CDC40P40968 YLR101CYLR101C 396 nt0.94□□□□□ -2.26
CDC40P40968 IRC23YOR044W 474 nt0.94□□□□□ -2.26
CDC40P40968 LAA1YJL207C 6045 nt0.94□□□□□ -2.26
CDC40P40968 YDL206WYDL206W 2289 nt0.94□□□□□ -2.26
CDC40P40968 tV(UAC)BtV(UAC)B 74 nt0.93□□□□□ -2.26
CDC40P40968 tV(UAC)DtV(UAC)D 74 nt0.93□□□□□ -2.26
CDC40P40968 ERP4YOR016C 624 nt0.93□□□□□ -2.26
CDC40P40968 YOR108C-AYOR108C-A 210 nt0.93□□□□□ -2.26
CDC40P40968 COG4YPR105C 2586 nt0.93□□□□□ -2.26
CDC40P40968 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
CDC40P40968 YJR003CYJR003C 1560 nt0.92□□□□□ -2.26
CDC40P40968 WAR1YML076C 2835 nt0.91□□□□□ -2.26
CDC40P40968 CBS1YDL069C 690 nt0.91□□□□□ -2.26
CDC40P40968 YKL083WYKL083W 615 nt0.91□□□□□ -2.26
CDC40P40968 YPL229WYPL229W 621 nt0.91□□□□□ -2.26
CDC40P40968 YGR130CYGR130C 2451 nt0.91□□□□□ -2.26
CDC40P40968 GEA2YEL022W 4380 nt0.91□□□□□ -2.26
CDC40P40968 snR72snR72 98 nt0.9□□□□□ -2.27
CDC40P40968 YAR047CYAR047C 321 nt0.9□□□□□ -2.27
CDC40P40968 YML003WYML003W 873 nt0.9□□□□□ -2.27
CDC40P40968 BEM2YER155C 6504 nt0.9□□□□□ -2.27
CDC40P40968 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
CDC40P40968 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
CDC40P40968 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
CDC40P40968 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
CDC40P40968 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
CDC40P40968 YHL041WYHL041W 450 nt0.89□□□□□ -2.27
CDC40P40968 YJL135WYJL135W 318 nt0.89□□□□□ -2.27
CDC40P40968 ATP19YOL077W-A 207 nt0.89□□□□□ -2.27
CDC40P40968 snR51snR51 107 nt0.89□□□□□ -2.27
CDC40P40968 PKH2YOL100W 3246 nt0.89□□□□□ -2.27
CDC40P40968 SMC1YFL008W 3678 nt0.88□□□□□ -2.27
CDC40P40968 YDR169C-AYDR169C-A 150 nt0.88□□□□□ -2.27
CDC40P40968 GPG1YGL121C 381 nt0.88□□□□□ -2.27
CDC40P40968 YMR290W-AYMR290W-A 348 nt0.88□□□□□ -2.27
CDC40P40968 YOR199WYOR199W 330 nt0.88□□□□□ -2.27
CDC40P40968 PCF11YDR228C 1881 nt0.88□□□□□ -2.27
CDC40P40968 NST1YNL091W 3723 nt0.87□□□□□ -2.27
CDC40P40968 SPT7YBR081C 3999 nt0.87□□□□□ -2.27
CDC40P40968 YPR117WYPR117W 7470 nt0.87□□□□□ -2.27
CDC40P40968 KAP120YPL125W 3099 nt0.86□□□□□ -2.27
CDC40P40968 ALY2YJL084C 3141 nt0.86□□□□□ -2.27
CDC40P40968 NUP157YER105C 4176 nt0.86□□□□□ -2.27
CDC40P40968 SPO75YLL005C 2607 nt0.85□□□□□ -2.27
CDC40P40968 SDH7YDR511W 402 nt0.85□□□□□ -2.27
CDC40P40968 YGR174W-AYGR174W-A 87 nt0.85□□□□□ -2.27
CDC40P40968 YCS4YLR272C 3531 nt0.85□□□□□ -2.27
CDC40P40968 RPL26AYLR344W 384 nt0.85□□□□□ -2.27
CDC40P40968 YOL160WYOL160W 342 nt0.85□□□□□ -2.27
CDC40P40968 IES4YOR189W 351 nt0.85□□□□□ -2.27
CDC40P40968 YAR009CYAR009C 3591 nt0.85□□□□□ -2.27
CDC40P40968 YAP6YDR259C 1152 nt0.84□□□□□ -2.27
CDC40P40968 YNL058CYNL058C 951 nt0.84□□□□□ -2.27
CDC40P40968 TTI1YKL033W 3117 nt0.83□□□□□ -2.28
CDC40P40968 YGR042WYGR042W 816 nt0.83□□□□□ -2.28
CDC40P40968 YDL196WYDL196W 330 nt0.82□□□□□ -2.28
CDC40P40968 CLU1YMR012W 3834 nt0.82□□□□□ -2.28
CDC40P40968 UBC7YMR022W 498 nt0.82□□□□□ -2.28
CDC40P40968 ALG13YGL047W 609 nt0.81□□□□□ -2.28
CDC40P40968 INP2YMR163C 2118 nt0.81□□□□□ -2.28
CDC40P40968 YPL261CYPL261C 309 nt0.81□□□□□ -2.28
CDC40P40968 SIP4YJL089W 2490 nt0.81□□□□□ -2.28
CDC40P40968 RAD34YDR314C 2079 nt0.8□□□□□ -2.28
CDC40P40968 DBP6YNR038W 1890 nt0.8□□□□□ -2.28
CDC40P40968 CUL3YGR003W 2235 nt0.8□□□□□ -2.28
CDC40P40968 ISF1YMR081C 1017 nt0.8□□□□□ -2.28
CDC40P40968 MRPL50YNR022C 420 nt0.8□□□□□ -2.28
CDC40P40968 IML1YJR138W 4755 nt0.8□□□□□ -2.28
CDC40P40968 IFH1YLR223C 3258 nt0.78□□□□□ -2.28
CDC40P40968 YBL008W-AYBL008W-A 240 nt0.78□□□□□ -2.28
CDC40P40968 YLR456WYLR456W 615 nt0.78□□□□□ -2.28
CDC40P40968 RPS24BYIL069C 408 nt0.77□□□□□ -2.29
CDC40P40968 SWF1YDR126W 1011 nt0.76□□□□□ -2.29
CDC40P40968 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
CDC40P40968 PAC1YOR269W 1485 nt0.75□□□□□ -2.29
CDC40P40968 ISD11YER048W-A 285 nt0.75□□□□□ -2.29
CDC40P40968 YIR044CYIR044C 186 nt0.75□□□□□ -2.29
CDC40P40968 PAN2YGL094C 3348 nt0.75□□□□□ -2.29
CDC40P40968 ROM2YLR371W 4071 nt0.74□□□□□ -2.29
CDC40P40968 YDL073WYDL073W 2955 nt0.74□□□□□ -2.29
CDC40P40968 YDR344CYDR344C 444 nt0.74□□□□□ -2.29
CDC40P40968 MAM33YIL070C 801 nt0.74□□□□□ -2.29
CDC40P40968 YJL007CYJL007C 315 nt0.74□□□□□ -2.29
CDC40P40968 PAM16YJL104W 450 nt0.74□□□□□ -2.29
CDC40P40968 PRP16YKR086W 3216 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 65 ms