Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 tF(GAA)H2tF(GAA)H2 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)MtF(GAA)M 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)P1tF(GAA)P1 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)P2tF(GAA)P2 73 nt0.96□□□□□ -2.26
MRPL40P36534 CYC7YEL039C 342 nt0.96□□□□□ -2.26
MRPL40P36534 PBI2YNL015W 228 nt0.96□□□□□ -2.26
MRPL40P36534 YOR032W-AYOR032W-A 201 nt0.96□□□□□ -2.26
MRPL40P36534 YBR076C-AYBR076C-A 267 nt0.96□□□□□ -2.26
MRPL40P36534 MMS4YBR098W 2076 nt0.96□□□□□ -2.26
MRPL40P36534 PDE2YOR360C 1581 nt0.96□□□□□ -2.26
MRPL40P36534 SCC2YDR180W 4482 nt0.95□□□□□ -2.26
MRPL40P36534 AIM9YER080W 1884 nt0.95□□□□□ -2.26
MRPL40P36534 LCD1YDR499W 2244 nt0.95□□□□□ -2.26
MRPL40P36534 STO1YMR125W 2586 nt0.95□□□□□ -2.26
MRPL40P36534 RRT1YBL048W 312 nt0.95□□□□□ -2.26
MRPL40P36534 YOR199WYOR199W 330 nt0.95□□□□□ -2.26
MRPL40P36534 YJR029WYJR029W 5268 nt0.94□□□□□ -2.26
MRPL40P36534 YPR137C-BYPR137C-B 5268 nt0.94□□□□□ -2.26
MRPL40P36534 PRP16YKR086W 3216 nt0.94□□□□□ -2.26
MRPL40P36534 YIL066W-AYIL066W-A 444 nt0.94□□□□□ -2.26
MRPL40P36534 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
MRPL40P36534 STE18YJR086W 333 nt0.94□□□□□ -2.26
MRPL40P36534 RPS27AYKL156W 249 nt0.94□□□□□ -2.26
MRPL40P36534 YNR025CYNR025C 360 nt0.94□□□□□ -2.26
MRPL40P36534 RIM20YOR275C 1986 nt0.94□□□□□ -2.26
MRPL40P36534 EFR3YMR212C 2349 nt0.93□□□□□ -2.26
MRPL40P36534 YJR003CYJR003C 1560 nt0.93□□□□□ -2.26
MRPL40P36534 QCR9YGR183C 201 nt0.93□□□□□ -2.26
MRPL40P36534 YDL206WYDL206W 2289 nt0.92□□□□□ -2.26
MRPL40P36534 SLI15YBR156C 2097 nt0.92□□□□□ -2.26
MRPL40P36534 YER087C-AYER087C-A 552 nt0.92□□□□□ -2.26
MRPL40P36534 YLR269CYLR269C 351 nt0.92□□□□□ -2.26
MRPL40P36534 NPC2YDL046W 522 nt0.91□□□□□ -2.26
MRPL40P36534 SLD3YGL113W 2007 nt0.9□□□□□ -2.27
MRPL40P36534 RPF1YHR088W 888 nt0.9□□□□□ -2.27
MRPL40P36534 NFU1YKL040C 771 nt0.9□□□□□ -2.27
MRPL40P36534 ISF1YMR081C 1017 nt0.9□□□□□ -2.27
MRPL40P36534 YML108WYML108W 318 nt0.89□□□□□ -2.27
MRPL40P36534 YOR108C-AYOR108C-A 210 nt0.89□□□□□ -2.27
MRPL40P36534 YMR160WYMR160W 2451 nt0.89□□□□□ -2.27
MRPL40P36534 ZIP2YGL249W 2115 nt0.88□□□□□ -2.27
MRPL40P36534 ERP4YOR016C 624 nt0.88□□□□□ -2.27
MRPL40P36534 YHR130CYHR130C 336 nt0.87□□□□□ -2.27
MRPL40P36534 YKL202WYKL202W 582 nt0.87□□□□□ -2.27
MRPL40P36534 YPR153WYPR153W 423 nt0.87□□□□□ -2.27
MRPL40P36534 TIM13YGR181W 318 nt0.86□□□□□ -2.27
MRPL40P36534 YHR125WYHR125W 306 nt0.86□□□□□ -2.27
MRPL40P36534 YOR072W-AYOR072W-A 249 nt0.86□□□□□ -2.27
MRPL40P36534 YER084W-AYER084W-A 513 nt0.85□□□□□ -2.27
MRPL40P36534 PAN2YGL094C 3348 nt0.85□□□□□ -2.27
MRPL40P36534 WAR1YML076C 2835 nt0.84□□□□□ -2.27
MRPL40P36534 YDL196WYDL196W 330 nt0.84□□□□□ -2.27
MRPL40P36534 YEL050W-AYEL050W-A 192 nt0.84□□□□□ -2.27
MRPL40P36534 YMR290W-AYMR290W-A 348 nt0.83□□□□□ -2.28
MRPL40P36534 YCK3YER123W 1575 nt0.83□□□□□ -2.28
MRPL40P36534 YBL071CYBL071C 309 nt0.82□□□□□ -2.28
MRPL40P36534 YDL011CYDL011C 324 nt0.81□□□□□ -2.28
MRPL40P36534 GPG1YGL121C 381 nt0.81□□□□□ -2.28
MRPL40P36534 ZEO1YOL109W 342 nt0.81□□□□□ -2.28
MRPL40P36534 YJL135WYJL135W 318 nt0.8□□□□□ -2.28
MRPL40P36534 AIM29YKR074W 468 nt0.8□□□□□ -2.28
MRPL40P36534 YOL160WYOL160W 342 nt0.8□□□□□ -2.28
MRPL40P36534 RPB10YOR210W 213 nt0.8□□□□□ -2.28
MRPL40P36534 YDL158CYDL158C 309 nt0.79□□□□□ -2.28
MRPL40P36534 ISD11YER048W-A 285 nt0.79□□□□□ -2.28
MRPL40P36534 YPL261CYPL261C 309 nt0.79□□□□□ -2.28
MRPL40P36534 BIR1YJR089W 2865 nt0.78□□□□□ -2.28
MRPL40P36534 ALG13YGL047W 609 nt0.78□□□□□ -2.28
MRPL40P36534 YGR042WYGR042W 816 nt0.78□□□□□ -2.28
MRPL40P36534 YLR287CYLR287C 1068 nt0.78□□□□□ -2.28
MRPL40P36534 CDC33YOL139C 642 nt0.78□□□□□ -2.28
MRPL40P36534 snR54snR54 86 nt0.78□□□□□ -2.28
MRPL40P36534 BI2Q0110 1272 nt0.77□□□□□ -2.29
MRPL40P36534 YJL020W-AYJL020W-A 258 nt0.77□□□□□ -2.29
MRPL40P36534 YMR141W-AYMR141W-A 225 nt0.77□□□□□ -2.29
MRPL40P36534 IES4YOR189W 351 nt0.77□□□□□ -2.29
MRPL40P36534 LOA1YPR139C 903 nt0.77□□□□□ -2.29
MRPL40P36534 DBP6YNR038W 1890 nt0.77□□□□□ -2.29
MRPL40P36534 SWF1YDR126W 1011 nt0.76□□□□□ -2.29
MRPL40P36534 WIP1YDR374W-A 270 nt0.76□□□□□ -2.29
MRPL40P36534 YHL042WYHL042W 453 nt0.76□□□□□ -2.29
MRPL40P36534 YNL122CYNL122C 348 nt0.76□□□□□ -2.29
MRPL40P36534 YOL014WYOL014W 375 nt0.76□□□□□ -2.29
MRPL40P36534 PKH2YOL100W 3246 nt0.76□□□□□ -2.29
MRPL40P36534 CMC4YMR194C-B 222 nt0.75□□□□□ -2.29
MRPL40P36534 DIE2YGR227W 1578 nt0.74□□□□□ -2.29
MRPL40P36534 NHP2YDL208W 471 nt0.74□□□□□ -2.29
MRPL40P36534 YDR521WYDR521W 336 nt0.74□□□□□ -2.29
MRPL40P36534 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
MRPL40P36534 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
MRPL40P36534 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 39.8 ms