Protein–RNA interactions for Protein: P16451

PDX1, Pyruvate dehydrogenase complex protein X component, mitochondrial, yeastyeast

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDX1P16451 CDC31YOR257W 486 nt1.35□□□□□ -2.19
PDX1P16451 FYV8YGR196C 2454 nt1.35□□□□□ -2.19
PDX1P16451 ZIP2YGL249W 2115 nt1.34□□□□□ -2.19
PDX1P16451 YMR242W-AYMR242W-A 90 nt1.34□□□□□ -2.19
PDX1P16451 NPC2YDL046W 522 nt1.33□□□□□ -2.2
PDX1P16451 YLR434CYLR434C 384 nt1.33□□□□□ -2.2
PDX1P16451 PIK1YNL267W 3201 nt1.33□□□□□ -2.2
PDX1P16451 PFD1YJL179W 330 nt1.32□□□□□ -2.2
PDX1P16451 YNL058CYNL058C 951 nt1.32□□□□□ -2.2
PDX1P16451 NUP145YGL092W 3954 nt1.32□□□□□ -2.2
PDX1P16451 YHL041WYHL041W 450 nt1.31□□□□□ -2.2
PDX1P16451 YLR222C-AYLR222C-A 231 nt1.31□□□□□ -2.2
PDX1P16451 RRT1YBL048W 312 nt1.31□□□□□ -2.2
PDX1P16451 YOL159CYOL159C 516 nt1.31□□□□□ -2.2
PDX1P16451 snR51snR51 107 nt1.31□□□□□ -2.2
PDX1P16451 SLI15YBR156C 2097 nt1.31□□□□□ -2.2
PDX1P16451 ALY2YJL084C 3141 nt1.31□□□□□ -2.2
PDX1P16451 MSH3YCR092C 3057 nt1.3□□□□□ -2.2
PDX1P16451 APL3YBL037W 3078 nt1.3□□□□□ -2.2
PDX1P16451 YMR001C-AYMR001C-A 231 nt1.3□□□□□ -2.2
PDX1P16451 SWF1YDR126W 1011 nt1.29□□□□□ -2.2
PDX1P16451 YER079WYER079W 633 nt1.29□□□□□ -2.2
PDX1P16451 YMR290W-AYMR290W-A 348 nt1.29□□□□□ -2.2
PDX1P16451 YBR012CYBR012C 420 nt1.29□□□□□ -2.2
PDX1P16451 YPL261CYPL261C 309 nt1.29□□□□□ -2.2
PDX1P16451 LCD1YDR499W 2244 nt1.28□□□□□ -2.2
PDX1P16451 MAD1YGL086W 2250 nt1.28□□□□□ -2.2
PDX1P16451 tQ(UUG)E2tQ(UUG)E2 72 nt1.28□□□□□ -2.2
PDX1P16451 YOR053WYOR053W 342 nt1.28□□□□□ -2.2
PDX1P16451 YOR199WYOR199W 330 nt1.28□□□□□ -2.2
PDX1P16451 RAD9YDR217C 3930 nt1.28□□□□□ -2.2
PDX1P16451 YJR003CYJR003C 1560 nt1.28□□□□□ -2.2
PDX1P16451 EAF1YDR359C 2949 nt1.27□□□□□ -2.21
PDX1P16451 MMS4YBR098W 2076 nt1.27□□□□□ -2.21
PDX1P16451 CDC36YDL165W 576 nt1.27□□□□□ -2.21
PDX1P16451 YJL135WYJL135W 318 nt1.27□□□□□ -2.21
PDX1P16451 YOL160WYOL160W 342 nt1.27□□□□□ -2.21
PDX1P16451 YBR285WYBR285W 435 nt1.27□□□□□ -2.21
PDX1P16451 INP2YMR163C 2118 nt1.27□□□□□ -2.21
PDX1P16451 snR72snR72 98 nt1.26□□□□□ -2.21
PDX1P16451 SET3YKR029C 2256 nt1.26□□□□□ -2.21
PDX1P16451 COG4YPR105C 2586 nt1.25□□□□□ -2.21
PDX1P16451 STB6YKL072W 2301 nt1.25□□□□□ -2.21
PDX1P16451 BSC3YLR465C 309 nt1.25□□□□□ -2.21
PDX1P16451 YBR221W-AYBR221W-A 105 nt1.25□□□□□ -2.21
PDX1P16451 PBY1YBR094W 2262 nt1.25□□□□□ -2.21
PDX1P16451 FIG4YNL325C 2640 nt1.25□□□□□ -2.21
PDX1P16451 YIL020C-AYIL020C-A 339 nt1.24□□□□□ -2.21
PDX1P16451 SPC98YNL126W 2541 nt1.24□□□□□ -2.21
PDX1P16451 ATG31YDR022C 591 nt1.23□□□□□ -2.21
PDX1P16451 YHR138CYHR138C 345 nt1.23□□□□□ -2.21
PDX1P16451 PAC1YOR269W 1485 nt1.23□□□□□ -2.21
PDX1P16451 PDE2YOR360C 1581 nt1.22□□□□□ -2.21
PDX1P16451 MDS3YGL197W 4464 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
PDX1P16451 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
PDX1P16451 VAR1Q0140 1197 nt1.22□□□□□ -2.21
PDX1P16451 RPL38YLR325C 237 nt1.22□□□□□ -2.21
PDX1P16451 YBR200W-AYBR200W-A 165 nt1.22□□□□□ -2.21
PDX1P16451 STO1YMR125W 2586 nt1.21□□□□□ -2.22
PDX1P16451 LEE1YPL054W 906 nt1.21□□□□□ -2.22
PDX1P16451 RAD34YDR314C 2079 nt1.2□□□□□ -2.22
PDX1P16451 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
PDX1P16451 YIR044CYIR044C 186 nt1.2□□□□□ -2.22
PDX1P16451 YLR154W-FYLR154W-F 141 nt1.2□□□□□ -2.22
PDX1P16451 YML007C-AYML007C-A 111 nt1.2□□□□□ -2.22
PDX1P16451 ROM2YLR371W 4071 nt1.2□□□□□ -2.22
PDX1P16451 SLD3YGL113W 2007 nt1.2□□□□□ -2.22
PDX1P16451 IFH1YLR223C 3258 nt1.19□□□□□ -2.22
PDX1P16451 GPG1YGL121C 381 nt1.19□□□□□ -2.22
PDX1P16451 AHC1YOR023C 1701 nt1.19□□□□□ -2.22
PDX1P16451 YOR072W-AYOR072W-A 249 nt1.19□□□□□ -2.22
PDX1P16451 CDC25YLR310C 4770 nt1.19□□□□□ -2.22
PDX1P16451 YGR130CYGR130C 2451 nt1.18□□□□□ -2.22
PDX1P16451 RPS20YHL015W 366 nt1.18□□□□□ -2.22
PDX1P16451 NST1YNL091W 3723 nt1.18□□□□□ -2.22
PDX1P16451 PKH2YOL100W 3246 nt1.17□□□□□ -2.22
PDX1P16451 YER137W-AYER137W-A 306 nt1.17□□□□□ -2.22
PDX1P16451 IRC23YOR044W 474 nt1.17□□□□□ -2.22
PDX1P16451 YOR121CYOR121C 306 nt1.17□□□□□ -2.22
PDX1P16451 YPR002C-AYPR002C-A 198 nt1.17□□□□□ -2.22
PDX1P16451 NUP157YER105C 4176 nt1.17□□□□□ -2.22
PDX1P16451 PAN2YGL094C 3348 nt1.17□□□□□ -2.22
PDX1P16451 RIM20YOR275C 1986 nt1.17□□□□□ -2.22
PDX1P16451 YDL206WYDL206W 2289 nt1.17□□□□□ -2.22
PDX1P16451 CUL3YGR003W 2235 nt1.16□□□□□ -2.22
PDX1P16451 LAA1YJL207C 6045 nt1.16□□□□□ -2.22
PDX1P16451 YAL068W-AYAL068W-A 255 nt1.16□□□□□ -2.22
PDX1P16451 NIP100YPL174C 2607 nt1.14□□□□□ -2.23
PDX1P16451 PCC1YKR095W-A 267 nt1.14□□□□□ -2.23
PDX1P16451 YNL284C-BYNL284C-B 5268 nt1.13□□□□□ -2.23
PDX1P16451 YAR009CYAR009C 3591 nt1.13□□□□□ -2.23
PDX1P16451 YDR426CYDR426C 378 nt1.13□□□□□ -2.23
PDX1P16451 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
PDX1P16451 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms