Protein–RNA interactions for Protein: P16370

RPB3, DNA-directed RNA polymerase II subunit RPB3, yeastyeast

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB3P16370 MATALPHA2YCR039C 633 nt0.56□□□□□ -2.32
RPB3P16370 YDR029WYDR029W 315 nt0.56□□□□□ -2.32
RPB3P16370 URM1YIL008W 300 nt0.56□□□□□ -2.32
RPB3P16370 YPR153WYPR153W 423 nt0.56□□□□□ -2.32
RPB3P16370 GEA2YEL022W 4380 nt0.55□□□□□ -2.32
RPB3P16370 YJR003CYJR003C 1560 nt0.55□□□□□ -2.32
RPB3P16370 YDR521WYDR521W 336 nt0.55□□□□□ -2.32
RPB3P16370 ALG13YGL047W 609 nt0.55□□□□□ -2.32
RPB3P16370 YGR042WYGR042W 816 nt0.55□□□□□ -2.32
RPB3P16370 CMC4YMR194C-B 222 nt0.55□□□□□ -2.32
RPB3P16370 YPR159C-AYPR159C-A 102 nt0.55□□□□□ -2.32
RPB3P16370 COG4YPR105C 2586 nt0.55□□□□□ -2.32
RPB3P16370 EFR3YMR212C 2349 nt0.55□□□□□ -2.32
RPB3P16370 ZIP2YGL249W 2115 nt0.55□□□□□ -2.32
RPB3P16370 DBP6YNR038W 1890 nt0.54□□□□□ -2.32
RPB3P16370 YKL123WYKL123W 381 nt0.54□□□□□ -2.32
RPB3P16370 YOR029WYOR029W 336 nt0.54□□□□□ -2.32
RPB3P16370 YAR009CYAR009C 3591 nt0.54□□□□□ -2.32
RPB3P16370 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
RPB3P16370 YIL066W-AYIL066W-A 444 nt0.52□□□□□ -2.33
RPB3P16370 RPS27AYKL156W 249 nt0.52□□□□□ -2.33
RPB3P16370 RPL9AYGL147C 576 nt0.51□□□□□ -2.33
RPB3P16370 ISD11YER048W-A 285 nt0.5□□□□□ -2.33
RPB3P16370 GPG1YGL121C 381 nt0.5□□□□□ -2.33
RPB3P16370 YHR063W-AYHR063W-A 336 nt0.5□□□□□ -2.33
RPB3P16370 BIG1YHR101C 1008 nt0.5□□□□□ -2.33
RPB3P16370 YMR141W-AYMR141W-A 225 nt0.5□□□□□ -2.33
RPB3P16370 GPI15YNL038W 690 nt0.5□□□□□ -2.33
RPB3P16370 YOR108C-AYOR108C-A 210 nt0.5□□□□□ -2.33
RPB3P16370 YPL182CYPL182C 384 nt0.5□□□□□ -2.33
RPB3P16370 YML002WYML002W 2214 nt0.5□□□□□ -2.33
RPB3P16370 YCR001WYCR001W 315 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)BtT(AGU)B 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)CtT(AGU)C 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)DtT(AGU)D 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)HtT(AGU)H 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)I1tT(AGU)I1 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)I2tT(AGU)I2 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)JtT(AGU)J 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)N1tT(AGU)N1 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)N2tT(AGU)N2 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)O1tT(AGU)O1 73 nt0.49□□□□□ -2.33
RPB3P16370 tT(AGU)O2tT(AGU)O2 73 nt0.49□□□□□ -2.33
RPB3P16370 YJL135WYJL135W 318 nt0.49□□□□□ -2.33
RPB3P16370 YLR269CYLR269C 351 nt0.49□□□□□ -2.33
RPB3P16370 RPB10YOR210W 213 nt0.49□□□□□ -2.33
RPB3P16370 ECM12YHR021W-A 456 nt0.48□□□□□ -2.33
RPB3P16370 YIL142C-AYIL142C-A 333 nt0.48□□□□□ -2.33
RPB3P16370 LOA1YPR139C 903 nt0.48□□□□□ -2.33
RPB3P16370 BFR2YDR299W 1605 nt0.48□□□□□ -2.33
RPB3P16370 LTE1YAL024C 4308 nt0.47□□□□□ -2.33
RPB3P16370 PAN2YGL094C 3348 nt0.47□□□□□ -2.33
RPB3P16370 PKH2YOL100W 3246 nt0.47□□□□□ -2.33
RPB3P16370 YER087C-AYER087C-A 552 nt0.47□□□□□ -2.33
RPB3P16370 TIM13YGR181W 318 nt0.47□□□□□ -2.33
RPB3P16370 YMR290W-AYMR290W-A 348 nt0.47□□□□□ -2.33
RPB3P16370 STF2YGR008C 255 nt0.46□□□□□ -2.34
RPB3P16370 RPF1YHR088W 888 nt0.46□□□□□ -2.34
RPB3P16370 PAC1YOR269W 1485 nt0.46□□□□□ -2.34
RPB3P16370 NFU1YKL040C 771 nt0.45□□□□□ -2.34
RPB3P16370 YKL202WYKL202W 582 nt0.45□□□□□ -2.34
RPB3P16370 RPL38YLR325C 237 nt0.45□□□□□ -2.34
RPB3P16370 YOR282WYOR282W 321 nt0.45□□□□□ -2.34
RPB3P16370 PRP16YKR086W 3216 nt0.45□□□□□ -2.34
RPB3P16370 YHL042WYHL042W 453 nt0.44□□□□□ -2.34
RPB3P16370 PBI2YNL015W 228 nt0.44□□□□□ -2.34
RPB3P16370 YMR160WYMR160W 2451 nt0.43□□□□□ -2.34
RPB3P16370 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
RPB3P16370 snR72snR72 98 nt0.43□□□□□ -2.34
RPB3P16370 EAF6YJR082C 342 nt0.43□□□□□ -2.34
RPB3P16370 YOL160WYOL160W 342 nt0.43□□□□□ -2.34
RPB3P16370 YOR072W-AYOR072W-A 249 nt0.43□□□□□ -2.34
RPB3P16370 OST1YJL002C 1431 nt0.42□□□□□ -2.34
RPB3P16370 YDR344CYDR344C 444 nt0.42□□□□□ -2.34
RPB3P16370 HUG1YML058W-A 207 nt0.42□□□□□ -2.34
RPB3P16370 PMP1YCR024C-A 123 nt0.41□□□□□ -2.34
RPB3P16370 WIP1YDR374W-A 270 nt0.41□□□□□ -2.34
RPB3P16370 YPL261CYPL261C 309 nt0.41□□□□□ -2.34
RPB3P16370 YBR076C-AYBR076C-A 267 nt0.41□□□□□ -2.34
RPB3P16370 NPR2YEL062W 1848 nt0.41□□□□□ -2.34
RPB3P16370 CHS6YJL099W 2241 nt0.4□□□□□ -2.35
RPB3P16370 CDC33YOL139C 642 nt0.4□□□□□ -2.35
RPB3P16370 RPS30BYOR182C 192 nt0.4□□□□□ -2.35
RPB3P16370 RAD34YDR314C 2079 nt0.4□□□□□ -2.35
RPB3P16370 NOP9YJL010C 2001 nt0.39□□□□□ -2.35
RPB3P16370 YER084W-AYER084W-A 513 nt0.39□□□□□ -2.35
RPB3P16370 YML108WYML108W 318 nt0.39□□□□□ -2.35
RPB3P16370 YBL071CYBL071C 309 nt0.39□□□□□ -2.35
RPB3P16370 snR51snR51 107 nt0.39□□□□□ -2.35
RPB3P16370 EMC4YGL231C 573 nt0.38□□□□□ -2.35
RPB3P16370 YHR125WYHR125W 306 nt0.38□□□□□ -2.35
RPB3P16370 INA22YIR024C 651 nt0.38□□□□□ -2.35
RPB3P16370 YJL020W-AYJL020W-A 258 nt0.38□□□□□ -2.35
RPB3P16370 YBL008W-AYBL008W-A 240 nt0.38□□□□□ -2.35
RPB3P16370 YDL011CYDL011C 324 nt0.37□□□□□ -2.35
RPB3P16370 CUL3YGR003W 2235 nt0.37□□□□□ -2.35
RPB3P16370 SDH7YDR511W 402 nt0.36□□□□□ -2.35
RPB3P16370 STE18YJR086W 333 nt0.36□□□□□ -2.35
RPB3P16370 YPL044CYPL044C 549 nt0.36□□□□□ -2.35
RPB3P16370 UTP20YBL004W 7482 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms