Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 ECM21YBL101C 3354 nt3.06□□□□□ -1.92
TY1A-HP0C2I4 SPC105YGL093W 2754 nt3.06□□□□□ -1.92
TY1A-HP0C2I4 MAK10YEL053C 2202 nt3.05□□□□□ -1.92
TY1A-HP0C2I4 SMC3YJL074C 3693 nt3.05□□□□□ -1.92
TY1A-HP0C2I4 RPO41YFL036W 4056 nt3.04□□□□□ -1.92
TY1A-HP0C2I4 URA2YJL130C 6645 nt3.04□□□□□ -1.92
TY1A-HP0C2I4 BMS1YPL217C 3552 nt3.04□□□□□ -1.92
TY1A-HP0C2I4 RRP5YMR229C 5190 nt3.03□□□□□ -1.92
TY1A-HP0C2I4 SMC6YLR383W 3345 nt3.02□□□□□ -1.93
TY1A-HP0C2I4 UBP1YDL122W 2430 nt3.02□□□□□ -1.93
TY1A-HP0C2I4 YEL025CYEL025C 3567 nt3.02□□□□□ -1.93
TY1A-HP0C2I4 ARO80YDR421W 2853 nt3.02□□□□□ -1.93
TY1A-HP0C2I4 BFR2YDR299W 1605 nt3.01□□□□□ -1.93
TY1A-HP0C2I4 BUB1YGR188C 3066 nt3.01□□□□□ -1.93
TY1A-HP0C2I4 FIR1YER032W 2631 nt3.01□□□□□ -1.93
TY1A-HP0C2I4 PKH2YOL100W 3246 nt3□□□□□ -1.93
TY1A-HP0C2I4 UBP15YMR304W 3693 nt3□□□□□ -1.93
TY1A-HP0C2I4 BUD4YJR092W 4344 nt3□□□□□ -1.93
TY1A-HP0C2I4 BIR1YJR089W 2865 nt3□□□□□ -1.93
TY1A-HP0C2I4 RPL37BYDR500C 267 nt3□□□□□ -1.93
TY1A-HP0C2I4 COX5BYIL111W 456 nt3□□□□□ -1.93
TY1A-HP0C2I4 YKL100W-AYKL100W-A 90 nt3□□□□□ -1.93
TY1A-HP0C2I4 MLH3YPL164C 2148 nt3□□□□□ -1.93
TY1A-HP0C2I4 RIF1YBR275C 5751 nt3□□□□□ -1.93
TY1A-HP0C2I4 PKH1YDR490C 2301 nt2.99□□□□□ -1.93
TY1A-HP0C2I4 YPR108W-AYPR108W-A 213 nt2.99□□□□□ -1.93
TY1A-HP0C2I4 YBT1YLL048C 4986 nt2.99□□□□□ -1.93
TY1A-HP0C2I4 POL2YNL262W 6669 nt2.99□□□□□ -1.93
TY1A-HP0C2I4 TFC4YGR047C 3078 nt2.98□□□□□ -1.93
TY1A-HP0C2I4 YGL123C-AYGL123C-A 231 nt2.98□□□□□ -1.93
TY1A-HP0C2I4 YBL071C-BYBL071C-B 99 nt2.98□□□□□ -1.93
TY1A-HP0C2I4 TAH1YCR060W 336 nt2.97□□□□□ -1.93
TY1A-HP0C2I4 NFT1YKR103W 3657 nt2.97□□□□□ -1.93
TY1A-HP0C2I4 VAS1YGR094W 3315 nt2.97□□□□□ -1.93
TY1A-HP0C2I4 BUD2YKL092C 3315 nt2.97□□□□□ -1.93
TY1A-HP0C2I4 SSM4YIL030C 3960 nt2.96□□□□□ -1.94
TY1A-HP0C2I4 YHR032C-AYHR032C-A 120 nt2.96□□□□□ -1.94
TY1A-HP0C2I4 YJL127W-AYJL127W-A 117 nt2.96□□□□□ -1.94
TY1A-HP0C2I4 COG4YPR105C 2586 nt2.96□□□□□ -1.94
TY1A-HP0C2I4 IES6YEL044W 501 nt2.95□□□□□ -1.94
TY1A-HP0C2I4 YAL042C-AYAL042C-A 378 nt2.94□□□□□ -1.94
TY1A-HP0C2I4 RPS21AYKR057W 264 nt2.94□□□□□ -1.94
TY1A-HP0C2I4 KAP120YPL125W 3099 nt2.94□□□□□ -1.94
TY1A-HP0C2I4 LOS1YKL205W 3303 nt2.94□□□□□ -1.94
TY1A-HP0C2I4 AUS1YOR011W 4185 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 MRD1YPR112C 2664 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 SEC1YDR164C 2175 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 YGR240C-AYGR240C-A 201 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 GCN1YGL195W 8019 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 LRG1YDL240W 3054 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 TRS120YDR407C 3870 nt2.93□□□□□ -1.94
TY1A-HP0C2I4 YGR109W-BYGR109W-B 4644 nt2.92□□□□□ -1.94
TY1A-HP0C2I4 PAU11YGL261C 363 nt2.92□□□□□ -1.94
TY1A-HP0C2I4 YMR175W-AYMR175W-A 195 nt2.92□□□□□ -1.94
TY1A-HP0C2I4 YDL206WYDL206W 2289 nt2.92□□□□□ -1.94
TY1A-HP0C2I4 POL3YDL102W 3294 nt2.91□□□□□ -1.94
TY1A-HP0C2I4 RPN1YHR027C 2982 nt2.91□□□□□ -1.94
TY1A-HP0C2I4 YKL162C-AYKL162C-A 153 nt2.91□□□□□ -1.94
TY1A-HP0C2I4 YOL164W-AYOL164W-A 183 nt2.91□□□□□ -1.94
TY1A-HP0C2I4 IST2YBR086C 2841 nt2.9□□□□□ -1.94
TY1A-HP0C2I4 JSN1YJR091C 3276 nt2.9□□□□□ -1.95
TY1A-HP0C2I4 MDN1YLR106C 14733 nt2.9□□□□□ -1.95
TY1A-HP0C2I4 INP51YIL002C 2841 nt2.9□□□□□ -1.95
TY1A-HP0C2I4 SQS1YNL224C 2304 nt2.9□□□□□ -1.95
TY1A-HP0C2I4 FRK1YPL141C 2598 nt2.89□□□□□ -1.95
TY1A-HP0C2I4 UFD2YDL190C 2886 nt2.89□□□□□ -1.95
TY1A-HP0C2I4 CBF2YGR140W 2871 nt2.89□□□□□ -1.95
TY1A-HP0C2I4 TBS1YBR150C 3285 nt2.89□□□□□ -1.95
TY1A-HP0C2I4 SSN2YDR443C 4263 nt2.89□□□□□ -1.95
TY1A-HP0C2I4 STU2YLR045C 2667 nt2.88□□□□□ -1.95
TY1A-HP0C2I4 FLO5YHR211W 3228 nt2.88□□□□□ -1.95
TY1A-HP0C2I4 SLI15YBR156C 2097 nt2.88□□□□□ -1.95
TY1A-HP0C2I4 SCP160YJL080C 3669 nt2.88□□□□□ -1.95
TY1A-HP0C2I4 COG6YNL041C 2520 nt2.88□□□□□ -1.95
TY1A-HP0C2I4 ATG26YLR189C 3597 nt2.87□□□□□ -1.95
TY1A-HP0C2I4 SEC26YDR238C 2922 nt2.87□□□□□ -1.95
TY1A-HP0C2I4 RSM22YKL155C 1887 nt2.87□□□□□ -1.95
TY1A-HP0C2I4 CSR2YPR030W 3366 nt2.86□□□□□ -1.95
TY1A-HP0C2I4 CAF120YNL278W 3183 nt2.86□□□□□ -1.95
TY1A-HP0C2I4 ADR1YDR216W 3972 nt2.86□□□□□ -1.95
TY1A-HP0C2I4 SNQ2YDR011W 4506 nt2.86□□□□□ -1.95
TY1A-HP0C2I4 RDS1YCR106W 2499 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 STT4YLR305C 5703 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 tC(GCA)BtC(GCA)B 72 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 tC(GCA)GtC(GCA)G 72 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 tC(GCA)P1tC(GCA)P1 72 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 tC(GCA)P2tC(GCA)P2 72 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 YDR210WYDR210W 228 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 snR50snR50 90 nt2.85□□□□□ -1.95
TY1A-HP0C2I4 SGM1YJR134C 2124 nt2.84□□□□□ -1.95
TY1A-HP0C2I4 snR64snR64 101 nt2.84□□□□□ -1.95
TY1A-HP0C2I4 RTT107YHR154W 3213 nt2.84□□□□□ -1.96
TY1A-HP0C2I4 MSH5YDL154W 2706 nt2.84□□□□□ -1.96
TY1A-HP0C2I4 EAF1YDR359C 2949 nt2.83□□□□□ -1.96
TY1A-HP0C2I4 SPO71YDR104C 3738 nt2.83□□□□□ -1.96
TY1A-HP0C2I4 YGR146C-AYGR146C-A 162 nt2.83□□□□□ -1.96
TY1A-HP0C2I4 YBR109W-AYBR109W-A 225 nt2.83□□□□□ -1.96
TY1A-HP0C2I4 FYV10YIL097W 1551 nt2.83□□□□□ -1.96
TY1A-HP0C2I4 YSP2YDR326C 4317 nt2.82□□□□□ -1.96
TY1A-HP0C2I4 SAP185YJL098W 3177 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 96.5 ms