Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.44■□□□□ 0.38
Igkv5-39A0A0G2JDV4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Mir1668-201ENSMUST00000184114 107 ntBASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv5-39A0A0G2JDV4 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm21559-201ENSMUST00000220638 855 ntBASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Gm8587-201ENSMUST00000076538 843 ntBASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv5-39A0A0G2JDV4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms