Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmgn5Q9JL35 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn5Q9JL35 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn5Q9JL35 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Gm21956-201ENSMUST00000179946 522 ntBASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn5Q9JL35 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn5Q9JL35 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Gm13216-201ENSMUST00000117145 591 ntBASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Gm6139-201ENSMUST00000079261 882 ntBASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn5Q9JL35 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Hmgn5Q9JL35 Gm43060-201ENSMUST00000200621 289 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms