Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.18■□□□□ 0.82
Foxd1Q61345 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.17■□□□□ 0.82
Foxd1Q61345 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Foxd1Q61345 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Mtag2-201ENSMUST00000058665 714 ntBASIC20.17■□□□□ 0.82
Foxd1Q61345 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.17■□□□□ 0.82
Foxd1Q61345 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.17■□□□□ 0.82
Foxd1Q61345 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd1Q61345 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Foxd1Q61345 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.16■□□□□ 0.82
Foxd1Q61345 Gm11594-201ENSMUST00000122313 162 ntBASIC20.16■□□□□ 0.82
Foxd1Q61345 Gm27702-201ENSMUST00000184512 56 ntBASIC20.16■□□□□ 0.82
Foxd1Q61345 Gm27459-201ENSMUST00000184860 107 ntBASIC20.16■□□□□ 0.82
Foxd1Q61345 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd1Q61345 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Foxd1Q61345 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Zfp783-201ENSMUST00000095946 670 ntBASIC20.15■□□□□ 0.82
Foxd1Q61345 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.15■□□□□ 0.82
Foxd1Q61345 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.15■□□□□ 0.82
Foxd1Q61345 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd1Q61345 Fst-202ENSMUST00000223640 2612 ntBASIC20.14■□□□□ 0.82
Foxd1Q61345 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.14■□□□□ 0.81
Foxd1Q61345 Gm6623-201ENSMUST00000173570 544 ntBASIC20.14■□□□□ 0.81
Foxd1Q61345 Auts2-212ENSMUST00000178555 309 ntBASIC20.14■□□□□ 0.81
Foxd1Q61345 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Foxd1Q61345 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.14■□□□□ 0.81
Foxd1Q61345 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd1Q61345 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Foxd1Q61345 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Gm43347-201ENSMUST00000200226 580 ntBASIC20.13■□□□□ 0.81
Foxd1Q61345 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.13■□□□□ 0.81
Foxd1Q61345 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd1Q61345 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.13■□□□□ 0.81
Foxd1Q61345 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.12■□□□□ 0.81
Foxd1Q61345 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Foxd1Q61345 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Foxd1Q61345 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Foxd1Q61345 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Foxd1Q61345 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd1Q61345 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd1Q61345 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd1Q61345 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd1Q61345 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Foxd1Q61345 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Foxd1Q61345 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.11■□□□□ 0.81
Foxd1Q61345 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms