Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Znf235Q61116 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Znf235Q61116 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.31■□□□□ 0.52
Znf235Q61116 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Znf235Q61116 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Znf235Q61116 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.3■□□□□ 0.52
Znf235Q61116 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Znf235Q61116 Mir1668-201ENSMUST00000184114 107 ntBASIC18.3■□□□□ 0.52
Znf235Q61116 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Znf235Q61116 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.29■□□□□ 0.52
Znf235Q61116 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Gm18101-201ENSMUST00000215769 548 ntBASIC18.29■□□□□ 0.52
Znf235Q61116 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Znf235Q61116 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Znf235Q61116 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.29■□□□□ 0.52
Znf235Q61116 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Znf235Q61116 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Znf235Q61116 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.28■□□□□ 0.52
Znf235Q61116 Gm6345-202ENSMUST00000180900 204 ntBASIC18.28■□□□□ 0.52
Znf235Q61116 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.28■□□□□ 0.52
Znf235Q61116 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Znf235Q61116 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Znf235Q61116 Gm10566-201ENSMUST00000086739 996 ntBASIC18.28■□□□□ 0.52
Znf235Q61116 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.28■□□□□ 0.52
Znf235Q61116 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Znf235Q61116 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.28■□□□□ 0.52
Znf235Q61116 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Znf235Q61116 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Znf235Q61116 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.27■□□□□ 0.52
Znf235Q61116 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Znf235Q61116 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.27■□□□□ 0.52
Znf235Q61116 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.27■□□□□ 0.52
Znf235Q61116 Gm7213-201ENSMUST00000215977 950 ntBASIC18.27■□□□□ 0.52
Znf235Q61116 Gm21559-201ENSMUST00000220638 855 ntBASIC18.27■□□□□ 0.52
Znf235Q61116 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Gm8587-201ENSMUST00000076538 843 ntBASIC18.27■□□□□ 0.52
Znf235Q61116 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Znf235Q61116 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Znf235Q61116 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.27■□□□□ 0.52
Znf235Q61116 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Znf235Q61116 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Znf235Q61116 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Znf235Q61116 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Znf235Q61116 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.26■□□□□ 0.51
Znf235Q61116 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Znf235Q61116 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.26■□□□□ 0.51
Znf235Q61116 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms