Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 SPO75YLL005C 2607 nt0.93□□□□□ -2.26
MSA1Q08471 MKT1YNL085W 2493 nt0.93□□□□□ -2.26
MSA1Q08471 SPT21YMR179W 2277 nt0.92□□□□□ -2.26
MSA1Q08471 APL1YJR005W 2103 nt0.92□□□□□ -2.26
MSA1Q08471 TRM732YMR259C 4263 nt0.92□□□□□ -2.26
MSA1Q08471 PIG1YLR273C 1947 nt0.92□□□□□ -2.26
MSA1Q08471 snR84snR84 550 nt0.92□□□□□ -2.26
MSA1Q08471 YDR008CYDR008C 351 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
MSA1Q08471 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
MSA1Q08471 APQ13YJL075C 417 nt0.92□□□□□ -2.26
MSA1Q08471 PAM16YJL104W 450 nt0.92□□□□□ -2.26
MSA1Q08471 UBX4YMR067C 1251 nt0.92□□□□□ -2.26
MSA1Q08471 YMR153C-AYMR153C-A 336 nt0.92□□□□□ -2.26
MSA1Q08471 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
MSA1Q08471 NUP188YML103C 4968 nt0.92□□□□□ -2.26
MSA1Q08471 MXR1YER042W 555 nt0.91□□□□□ -2.26
MSA1Q08471 RPL34BYIL052C 366 nt0.91□□□□□ -2.26
MSA1Q08471 YML009C-AYML009C-A 327 nt0.91□□□□□ -2.26
MSA1Q08471 SPT7YBR081C 3999 nt0.9□□□□□ -2.26
MSA1Q08471 VAM6YDL077C 3150 nt0.9□□□□□ -2.26
MSA1Q08471 LYS14YDR034C 2373 nt0.9□□□□□ -2.27
MSA1Q08471 SRP14YDL092W 441 nt0.9□□□□□ -2.27
MSA1Q08471 SAS3YBL052C 2496 nt0.9□□□□□ -2.27
MSA1Q08471 MPT5YGL178W 2580 nt0.9□□□□□ -2.27
MSA1Q08471 BEM2YER155C 6504 nt0.89□□□□□ -2.27
MSA1Q08471 NUT1YGL151W 3399 nt0.89□□□□□ -2.27
MSA1Q08471 SPO23YBR250W 1572 nt0.89□□□□□ -2.27
MSA1Q08471 SNU56YDR240C 1479 nt0.89□□□□□ -2.27
MSA1Q08471 YDR029WYDR029W 315 nt0.89□□□□□ -2.27
MSA1Q08471 RTR1YER139C 681 nt0.89□□□□□ -2.27
MSA1Q08471 YAP3YHL009C 993 nt0.89□□□□□ -2.27
MSA1Q08471 TSC3YBR058C-A 243 nt0.89□□□□□ -2.27
MSA1Q08471 YAR009CYAR009C 3591 nt0.89□□□□□ -2.27
MSA1Q08471 SCC2YDR180W 4482 nt0.89□□□□□ -2.27
MSA1Q08471 BIG1YHR101C 1008 nt0.88□□□□□ -2.27
MSA1Q08471 SDH2YLL041C 801 nt0.88□□□□□ -2.27
MSA1Q08471 snR13snR13 124 nt0.88□□□□□ -2.27
MSA1Q08471 SLY1YDR189W 2001 nt0.88□□□□□ -2.27
MSA1Q08471 AI5_ALPHAQ0070 1893 nt0.87□□□□□ -2.27
MSA1Q08471 HMLALPHA2YCL067C 633 nt0.87□□□□□ -2.27
MSA1Q08471 MATALPHA2YCR039C 633 nt0.87□□□□□ -2.27
MSA1Q08471 NST1YNL091W 3723 nt0.87□□□□□ -2.27
MSA1Q08471 YJR003CYJR003C 1560 nt0.87□□□□□ -2.27
MSA1Q08471 RPL9AYGL147C 576 nt0.86□□□□□ -2.27
MSA1Q08471 YGR025WYGR025W 303 nt0.86□□□□□ -2.27
MSA1Q08471 HIT1YJR055W 495 nt0.86□□□□□ -2.27
MSA1Q08471 YBR012CYBR012C 420 nt0.86□□□□□ -2.27
MSA1Q08471 NUT2YPR168W 474 nt0.86□□□□□ -2.27
MSA1Q08471 SCW11YGL028C 1629 nt0.86□□□□□ -2.27
MSA1Q08471 PXA2YKL188C 2562 nt0.85□□□□□ -2.27
MSA1Q08471 YGL239CYGL239C 315 nt0.85□□□□□ -2.27
MSA1Q08471 EAF1YDR359C 2949 nt0.85□□□□□ -2.27
MSA1Q08471 YCK3YER123W 1575 nt0.84□□□□□ -2.27
MSA1Q08471 APL3YBL037W 3078 nt0.84□□□□□ -2.27
MSA1Q08471 YIL059CYIL059C 366 nt0.84□□□□□ -2.27
MSA1Q08471 EAF6YJR082C 342 nt0.84□□□□□ -2.27
MSA1Q08471 YMR175W-AYMR175W-A 195 nt0.84□□□□□ -2.27
MSA1Q08471 RCN2YOR220W 798 nt0.84□□□□□ -2.27
MSA1Q08471 snR14snR14 160 nt0.84□□□□□ -2.27
MSA1Q08471 HUR1YGL168W 333 nt0.83□□□□□ -2.28
MSA1Q08471 YGR045CYGR045C 363 nt0.83□□□□□ -2.28
MSA1Q08471 RPS27AYKL156W 249 nt0.83□□□□□ -2.28
MSA1Q08471 DOP1YDR141C 5097 nt0.83□□□□□ -2.28
MSA1Q08471 RFX1YLR176C 2436 nt0.83□□□□□ -2.28
MSA1Q08471 YLL032CYLL032C 2478 nt0.82□□□□□ -2.28
MSA1Q08471 ROM2YLR371W 4071 nt0.82□□□□□ -2.28
MSA1Q08471 STB6YKL072W 2301 nt0.82□□□□□ -2.28
MSA1Q08471 GPI15YNL038W 690 nt0.82□□□□□ -2.28
MSA1Q08471 YPL182CYPL182C 384 nt0.82□□□□□ -2.28
MSA1Q08471 YBR200W-AYBR200W-A 165 nt0.82□□□□□ -2.28
MSA1Q08471 RIM20YOR275C 1986 nt0.82□□□□□ -2.28
MSA1Q08471 MMS4YBR098W 2076 nt0.81□□□□□ -2.28
MSA1Q08471 YDR269CYDR269C 324 nt0.81□□□□□ -2.28
MSA1Q08471 YER023C-AYER023C-A 213 nt0.81□□□□□ -2.28
MSA1Q08471 RPL16AYIL133C 600 nt0.81□□□□□ -2.28
MSA1Q08471 UPS1YLR193C 528 nt0.81□□□□□ -2.28
MSA1Q08471 EFR3YMR212C 2349 nt0.81□□□□□ -2.28
MSA1Q08471 FIG4YNL325C 2640 nt0.8□□□□□ -2.28
MSA1Q08471 YCR001WYCR001W 315 nt0.8□□□□□ -2.28
MSA1Q08471 EMC4YGL231C 573 nt0.8□□□□□ -2.28
MSA1Q08471 URM1YIL008W 300 nt0.8□□□□□ -2.28
MSA1Q08471 PBI2YNL015W 228 nt0.8□□□□□ -2.28
MSA1Q08471 RUF22RUF22 515 nt0.8□□□□□ -2.28
MSA1Q08471 RPL32YBL092W 393 nt0.8□□□□□ -2.28
MSA1Q08471 YOL014WYOL014W 375 nt0.8□□□□□ -2.28
MSA1Q08471 YBR076C-AYBR076C-A 267 nt0.8□□□□□ -2.28
MSA1Q08471 YBR221W-AYBR221W-A 105 nt0.8□□□□□ -2.28
MSA1Q08471 YER076W-AYER076W-A 348 nt0.79□□□□□ -2.28
MSA1Q08471 MRPL31YKL138C 396 nt0.79□□□□□ -2.28
MSA1Q08471 YMR242W-AYMR242W-A 90 nt0.79□□□□□ -2.28
MSA1Q08471 YOR072W-AYOR072W-A 249 nt0.79□□□□□ -2.28
MSA1Q08471 PDE2YOR360C 1581 nt0.79□□□□□ -2.28
MSA1Q08471 EMT1tM(CAU)D 73 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms