Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 YPL197CYPL197C 414 nt0.41□□□□□ -2.34
RFU1Q08003 MKT1YNL085W 2493 nt0.41□□□□□ -2.34
RFU1Q08003 OCA6YDR067C 675 nt0.4□□□□□ -2.35
RFU1Q08003 ALG13YGL047W 609 nt0.4□□□□□ -2.35
RFU1Q08003 ECM12YHR021W-A 456 nt0.4□□□□□ -2.35
RFU1Q08003 YOR218CYOR218C 420 nt0.4□□□□□ -2.35
RFU1Q08003 LRP1YHR081W 555 nt0.39□□□□□ -2.35
RFU1Q08003 GEA2YEL022W 4380 nt0.38□□□□□ -2.35
RFU1Q08003 SLD3YGL113W 2007 nt0.38□□□□□ -2.35
RFU1Q08003 YDR114CYDR114C 303 nt0.38□□□□□ -2.35
RFU1Q08003 QCR7YDR529C 384 nt0.38□□□□□ -2.35
RFU1Q08003 KAR1YNL188W 1302 nt0.38□□□□□ -2.35
RFU1Q08003 MMS4YBR098W 2076 nt0.37□□□□□ -2.35
RFU1Q08003 DBP6YNR038W 1890 nt0.37□□□□□ -2.35
RFU1Q08003 YEL018C-AYEL018C-A 534 nt0.37□□□□□ -2.35
RFU1Q08003 TIM10YHR005C-A 282 nt0.37□□□□□ -2.35
RFU1Q08003 YHR063W-AYHR063W-A 336 nt0.37□□□□□ -2.35
RFU1Q08003 SDH2YLL041C 801 nt0.37□□□□□ -2.35
RFU1Q08003 YMR013C-AYMR013C-A 150 nt0.37□□□□□ -2.35
RFU1Q08003 YNL146C-AYNL146C-A 195 nt0.37□□□□□ -2.35
RFU1Q08003 YPR099CYPR099C 357 nt0.37□□□□□ -2.35
RFU1Q08003 ALY2YJL084C 3141 nt0.37□□□□□ -2.35
RFU1Q08003 PAN3YKL025C 2040 nt0.37□□□□□ -2.35
RFU1Q08003 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)BtF(GAA)B 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)FtF(GAA)F 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)GtF(GAA)G 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)H1tF(GAA)H1 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)H2tF(GAA)H2 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)MtF(GAA)M 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)P1tF(GAA)P1 73 nt0.36□□□□□ -2.35
RFU1Q08003 tF(GAA)P2tF(GAA)P2 73 nt0.36□□□□□ -2.35
RFU1Q08003 SLX9YGR081C 633 nt0.36□□□□□ -2.35
RFU1Q08003 YIL059CYIL059C 366 nt0.36□□□□□ -2.35
RFU1Q08003 YPR170CYPR170C 336 nt0.36□□□□□ -2.35
RFU1Q08003 BI4Q0120 1917 nt0.36□□□□□ -2.35
RFU1Q08003 SPO23YBR250W 1572 nt0.36□□□□□ -2.35
RFU1Q08003 LYS14YDR034C 2373 nt0.35□□□□□ -2.35
RFU1Q08003 SLY1YDR189W 2001 nt0.35□□□□□ -2.35
RFU1Q08003 YDR220CYDR220C 294 nt0.35□□□□□ -2.35
RFU1Q08003 RSM27YGR215W 333 nt0.35□□□□□ -2.35
RFU1Q08003 YBR071WYBR071W 636 nt0.35□□□□□ -2.35
RFU1Q08003 YBR121C-AYBR121C-A 159 nt0.35□□□□□ -2.35
RFU1Q08003 LTE1YAL024C 4308 nt0.35□□□□□ -2.35
RFU1Q08003 LCD1YDR499W 2244 nt0.34□□□□□ -2.35
RFU1Q08003 WAR1YML076C 2835 nt0.34□□□□□ -2.35
RFU1Q08003 PAN2YGL094C 3348 nt0.34□□□□□ -2.35
RFU1Q08003 snR84snR84 550 nt0.34□□□□□ -2.36
RFU1Q08003 UPS1YLR193C 528 nt0.34□□□□□ -2.36
RFU1Q08003 YDR008CYDR008C 351 nt0.33□□□□□ -2.36
RFU1Q08003 CWC23YGL128C 852 nt0.33□□□□□ -2.36
RFU1Q08003 RPC10YHR143W-A 213 nt0.33□□□□□ -2.36
RFU1Q08003 YMR153C-AYMR153C-A 336 nt0.33□□□□□ -2.36
RFU1Q08003 YDR182W-AYDR182W-A 204 nt0.32□□□□□ -2.36
RFU1Q08003 ISD11YER048W-A 285 nt0.32□□□□□ -2.36
RFU1Q08003 TAD1YGL243W 1203 nt0.32□□□□□ -2.36
RFU1Q08003 YPR153WYPR153W 423 nt0.32□□□□□ -2.36
RFU1Q08003 YER138W-AYER138W-A 105 nt0.31□□□□□ -2.36
RFU1Q08003 YFR057WYFR057W 456 nt0.31□□□□□ -2.36
RFU1Q08003 YGL015CYGL015C 393 nt0.31□□□□□ -2.36
RFU1Q08003 YHR139C-AYHR139C-A 312 nt0.31□□□□□ -2.36
RFU1Q08003 YKL145W-AYKL145W-A 93 nt0.31□□□□□ -2.36
RFU1Q08003 RRT1YBL048W 312 nt0.31□□□□□ -2.36
RFU1Q08003 YBL107W-AYBL107W-A 105 nt0.31□□□□□ -2.36
RFU1Q08003 ENV11YGR071C 2583 nt0.3□□□□□ -2.36
RFU1Q08003 MET32YDR253C 576 nt0.3□□□□□ -2.36
RFU1Q08003 YIR021W-AYIR021W-A 213 nt0.3□□□□□ -2.36
RFU1Q08003 YPR096CYPR096C 303 nt0.3□□□□□ -2.36
RFU1Q08003 AI1Q0050 2505 nt0.28□□□□□ -2.36
RFU1Q08003 BFR2YDR299W 1605 nt0.28□□□□□ -2.36
RFU1Q08003 snR5snR5 204 nt0.28□□□□□ -2.36
RFU1Q08003 YER188C-AYER188C-A 300 nt0.28□□□□□ -2.36
RFU1Q08003 YGR042WYGR042W 816 nt0.28□□□□□ -2.36
RFU1Q08003 YGR115CYGR115C 780 nt0.28□□□□□ -2.36
RFU1Q08003 YLR271WYLR271W 825 nt0.28□□□□□ -2.36
RFU1Q08003 UBX4YMR067C 1251 nt0.28□□□□□ -2.36
RFU1Q08003 SLI15YBR156C 2097 nt0.28□□□□□ -2.37
RFU1Q08003 YCK3YER123W 1575 nt0.28□□□□□ -2.37
RFU1Q08003 YSP1YHR155W 3687 nt0.27□□□□□ -2.37
RFU1Q08003 YLL032CYLL032C 2478 nt0.27□□□□□ -2.37
RFU1Q08003 YGR228WYGR228W 345 nt0.27□□□□□ -2.37
RFU1Q08003 YLR146W-AYLR146W-A 189 nt0.27□□□□□ -2.37
RFU1Q08003 SPO13YHR014W 876 nt0.26□□□□□ -2.37
RFU1Q08003 SPC2YML055W 537 nt0.26□□□□□ -2.37
RFU1Q08003 YOR282WYOR282W 321 nt0.26□□□□□ -2.37
RFU1Q08003 MLP2YIL149C 5040 nt0.26□□□□□ -2.37
RFU1Q08003 IQG1YPL242C 4488 nt0.25□□□□□ -2.37
RFU1Q08003 WIP1YDR374W-A 270 nt0.25□□□□□ -2.37
RFU1Q08003 ABF2YMR072W 552 nt0.25□□□□□ -2.37
RFU1Q08003 VAM3YOR106W 852 nt0.25□□□□□ -2.37
RFU1Q08003 UBS1YBR165W 834 nt0.25□□□□□ -2.37
RFU1Q08003 POP7YBR167C 423 nt0.25□□□□□ -2.37
RFU1Q08003 BIR1YJR089W 2865 nt0.25□□□□□ -2.37
RFU1Q08003 CHS6YJL099W 2241 nt0.24□□□□□ -2.37
RFU1Q08003 NPC2YDL046W 522 nt0.24□□□□□ -2.37
RFU1Q08003 MRPL31YKL138C 396 nt0.24□□□□□ -2.37
RFU1Q08003 SDS22YKL193C 1017 nt0.24□□□□□ -2.37
RFU1Q08003 YPT6YLR262C 648 nt0.24□□□□□ -2.37
RFU1Q08003 RPL32YBL092W 393 nt0.24□□□□□ -2.37
RFU1Q08003 CSM4YPL200W 471 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 44.7 ms