Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 Q0142Q0142 177 nt1.76□□□□□ -2.13
VPS38Q05919 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
VPS38Q05919 YPR197CYPR197C 564 nt1.76□□□□□ -2.13
VPS38Q05919 LYS14YDR034C 2373 nt1.75□□□□□ -2.13
VPS38Q05919 IRC23YOR044W 474 nt1.75□□□□□ -2.13
VPS38Q05919 EFR3YMR212C 2349 nt1.75□□□□□ -2.13
VPS38Q05919 DCP2YNL118C 2913 nt1.74□□□□□ -2.13
VPS38Q05919 YOP1YPR028W 543 nt1.74□□□□□ -2.13
VPS38Q05919 PKH3YDR466W 2697 nt1.74□□□□□ -2.13
VPS38Q05919 MDM20YOL076W 2391 nt1.74□□□□□ -2.13
VPS38Q05919 HMI1YOL095C 2121 nt1.73□□□□□ -2.13
VPS38Q05919 YDR003W-AYDR003W-A 123 nt1.73□□□□□ -2.13
VPS38Q05919 YDR524W-CYDR524W-C 90 nt1.73□□□□□ -2.13
VPS38Q05919 YEL057CYEL057C 702 nt1.73□□□□□ -2.13
VPS38Q05919 YAR053WYAR053W 297 nt1.73□□□□□ -2.13
VPS38Q05919 ZIP1YDR285W 2628 nt1.72□□□□□ -2.13
VPS38Q05919 FRK1YPL141C 2598 nt1.72□□□□□ -2.13
VPS38Q05919 TRX1YLR043C 312 nt1.72□□□□□ -2.13
VPS38Q05919 LHS1YKL073W 2646 nt1.72□□□□□ -2.13
VPS38Q05919 RFX1YLR176C 2436 nt1.72□□□□□ -2.13
VPS38Q05919 YBP1YBR216C 2025 nt1.71□□□□□ -2.14
VPS38Q05919 SAC3YDR159W 3906 nt1.71□□□□□ -2.14
VPS38Q05919 PAU3YCR104W 375 nt1.71□□□□□ -2.14
VPS38Q05919 BIL1YOR304C-A 231 nt1.71□□□□□ -2.14
VPS38Q05919 YLR035C-AYLR035C-A 3468 nt1.7□□□□□ -2.14
VPS38Q05919 CYC7YEL039C 342 nt1.7□□□□□ -2.14
VPS38Q05919 YMR247W-AYMR247W-A 144 nt1.7□□□□□ -2.14
VPS38Q05919 SAR1YPL218W 573 nt1.7□□□□□ -2.14
VPS38Q05919 NUT2YPR168W 474 nt1.7□□□□□ -2.14
VPS38Q05919 SLY1YDR189W 2001 nt1.69□□□□□ -2.14
VPS38Q05919 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
VPS38Q05919 RPS20YHL015W 366 nt1.69□□□□□ -2.14
VPS38Q05919 YHL041WYHL041W 450 nt1.69□□□□□ -2.14
VPS38Q05919 COA6YMR244C-A 315 nt1.69□□□□□ -2.14
VPS38Q05919 YNL058CYNL058C 951 nt1.69□□□□□ -2.14
VPS38Q05919 YOR072W-AYOR072W-A 249 nt1.69□□□□□ -2.14
VPS38Q05919 YPR016W-AYPR016W-A 261 nt1.69□□□□□ -2.14
VPS38Q05919 ATG11YPR049C 3537 nt1.69□□□□□ -2.14
VPS38Q05919 PAC1YOR269W 1485 nt1.69□□□□□ -2.14
VPS38Q05919 MLH3YPL164C 2148 nt1.68□□□□□ -2.14
VPS38Q05919 MUK1YPL070W 1839 nt1.68□□□□□ -2.14
VPS38Q05919 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
VPS38Q05919 IRA1YBR140C 9279 nt1.68□□□□□ -2.14
VPS38Q05919 UPS1YLR193C 528 nt1.67□□□□□ -2.14
VPS38Q05919 YMR141W-AYMR141W-A 225 nt1.67□□□□□ -2.14
VPS38Q05919 SFB2YNL049C 2631 nt1.67□□□□□ -2.14
VPS38Q05919 SKI3YPR189W 4299 nt1.66□□□□□ -2.14
VPS38Q05919 RPL31AYDL075W 342 nt1.66□□□□□ -2.14
VPS38Q05919 YHL037CYHL037C 402 nt1.66□□□□□ -2.14
VPS38Q05919 YHR052W-AYHR052W-A 195 nt1.66□□□□□ -2.14
VPS38Q05919 YHR054W-AYHR054W-A 195 nt1.66□□□□□ -2.14
VPS38Q05919 YPL038W-AYPL038W-A 192 nt1.66□□□□□ -2.14
VPS38Q05919 YLL032CYLL032C 2478 nt1.66□□□□□ -2.14
VPS38Q05919 HSL1YKL101W 4557 nt1.66□□□□□ -2.14
VPS38Q05919 DGR2YKL121W 2559 nt1.65□□□□□ -2.14
VPS38Q05919 RKM1YPL208W 1752 nt1.65□□□□□ -2.14
VPS38Q05919 tW(UCA)QtW(UCA)Q 74 nt1.65□□□□□ -2.15
VPS38Q05919 BPH1YCR032W 6504 nt1.65□□□□□ -2.15
VPS38Q05919 SGO1YOR073W 1773 nt1.64□□□□□ -2.15
VPS38Q05919 SRP14YDL092W 441 nt1.64□□□□□ -2.15
VPS38Q05919 YDL240C-AYDL240C-A 138 nt1.64□□□□□ -2.15
VPS38Q05919 MRPL31YKL138C 396 nt1.64□□□□□ -2.15
VPS38Q05919 RPL38YLR325C 237 nt1.64□□□□□ -2.15
VPS38Q05919 KCS1YDR017C 3153 nt1.64□□□□□ -2.15
VPS38Q05919 ENV11YGR071C 2583 nt1.63□□□□□ -2.15
VPS38Q05919 PIG1YLR273C 1947 nt1.63□□□□□ -2.15
VPS38Q05919 SBE22YHR103W 2559 nt1.63□□□□□ -2.15
VPS38Q05919 YOR093CYOR093C 4947 nt1.63□□□□□ -2.15
VPS38Q05919 TRM3YDL112W 4311 nt1.62□□□□□ -2.15
VPS38Q05919 tQ(UUG)E2tQ(UUG)E2 72 nt1.62□□□□□ -2.15
VPS38Q05919 YBR174CYBR174C 315 nt1.62□□□□□ -2.15
VPS38Q05919 snR51snR51 107 nt1.62□□□□□ -2.15
VPS38Q05919 BRR2YER172C 6492 nt1.62□□□□□ -2.15
VPS38Q05919 SAS3YBL052C 2496 nt1.62□□□□□ -2.15
VPS38Q05919 ADR1YDR216W 3972 nt1.62□□□□□ -2.15
VPS38Q05919 CCH1YGR217W 6120 nt1.61□□□□□ -2.15
VPS38Q05919 PAU2YEL049W 363 nt1.61□□□□□ -2.15
VPS38Q05919 EMC5YIL027C 426 nt1.61□□□□□ -2.15
VPS38Q05919 YIL102CYIL102C 306 nt1.61□□□□□ -2.15
VPS38Q05919 MON2YNL297C 4911 nt1.61□□□□□ -2.15
VPS38Q05919 CTF4YPR135W 2784 nt1.6□□□□□ -2.15
VPS38Q05919 RIM20YOR275C 1986 nt1.6□□□□□ -2.15
VPS38Q05919 APL2YKL135C 2181 nt1.6□□□□□ -2.15
VPS38Q05919 YMR230W-AYMR230W-A 189 nt1.6□□□□□ -2.15
VPS38Q05919 RPB10YOR210W 213 nt1.6□□□□□ -2.15
VPS38Q05919 MVP1YMR004W 1536 nt1.6□□□□□ -2.15
VPS38Q05919 PFD1YJL179W 330 nt1.59□□□□□ -2.15
VPS38Q05919 YML007C-AYML007C-A 111 nt1.59□□□□□ -2.15
VPS38Q05919 YAF9YNL107W 681 nt1.59□□□□□ -2.15
VPS38Q05919 TIM18YOR297C 579 nt1.59□□□□□ -2.15
VPS38Q05919 CAT8YMR280C 4302 nt1.59□□□□□ -2.16
VPS38Q05919 DNF3YMR162C 4971 nt1.59□□□□□ -2.16
VPS38Q05919 INP2YMR163C 2118 nt1.58□□□□□ -2.16
VPS38Q05919 YOR019WYOR019W 2193 nt1.58□□□□□ -2.16
VPS38Q05919 CSN9YDR179C 489 nt1.58□□□□□ -2.16
VPS38Q05919 YGR109W-BYGR109W-B 4644 nt1.58□□□□□ -2.16
VPS38Q05919 YDR182W-AYDR182W-A 204 nt1.57□□□□□ -2.16
VPS38Q05919 RPL40BYKR094C 387 nt1.57□□□□□ -2.16
VPS38Q05919 SPO24YPR036W-A 204 nt1.57□□□□□ -2.16
VPS38Q05919 YJL022WYJL022W 309 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms