Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 SPO22YIL073C 2928 nt2.55□□□□□ -2
HDA1P53973 ATP7YKL016C 525 nt2.55□□□□□ -2
HDA1P53973 YKU80YMR106C 1890 nt2.55□□□□□ -2
HDA1P53973 INP2YMR163C 2118 nt2.55□□□□□ -2
HDA1P53973 YMR321CYMR321C 318 nt2.55□□□□□ -2
HDA1P53973 YOR302WYOR302W 78 nt2.55□□□□□ -2
HDA1P53973 INO80YGL150C 4470 nt2.55□□□□□ -2
HDA1P53973 PLC1YPL268W 2610 nt2.55□□□□□ -2
HDA1P53973 DNF1YER166W 4716 nt2.54□□□□□ -2
HDA1P53973 STB4YMR019W 2850 nt2.54□□□□□ -2
HDA1P53973 YNL114CYNL114C 372 nt2.54□□□□□ -2
HDA1P53973 YBL083CYBL083C 426 nt2.54□□□□□ -2
HDA1P53973 MLH1YMR167W 2310 nt2.54□□□□□ -2
HDA1P53973 CBF2YGR140W 2871 nt2.54□□□□□ -2
HDA1P53973 SWR1YDR334W 4545 nt2.54□□□□□ -2
HDA1P53973 ATG11YPR049C 3537 nt2.54□□□□□ -2
HDA1P53973 PDE2YOR360C 1581 nt2.53□□□□□ -2
HDA1P53973 SAP190YKR028W 3102 nt2.53□□□□□ -2
HDA1P53973 SSS1YDR086C 243 nt2.53□□□□□ -2
HDA1P53973 tF(GAA)QtF(GAA)Q 75 nt2.53□□□□□ -2
HDA1P53973 RPB10YOR210W 213 nt2.53□□□□□ -2
HDA1P53973 LCL1YPL056C 306 nt2.53□□□□□ -2
HDA1P53973 SPT21YMR179W 2277 nt2.53□□□□□ -2
HDA1P53973 ESC1YMR219W 4977 nt2.53□□□□□ -2
HDA1P53973 SLM1YIL105C 2061 nt2.53□□□□□ -2.01
HDA1P53973 SLY1YDR189W 2001 nt2.52□□□□□ -2.01
HDA1P53973 MMS22YLR320W 4365 nt2.52□□□□□ -2.01
HDA1P53973 RPH1YER169W 2391 nt2.52□□□□□ -2.01
HDA1P53973 YEF3YLR249W 3135 nt2.52□□□□□ -2.01
HDA1P53973 YDR286CYDR286C 345 nt2.52□□□□□ -2.01
HDA1P53973 YEL014CYEL014C 306 nt2.52□□□□□ -2.01
HDA1P53973 VPS55YJR044C 423 nt2.52□□□□□ -2.01
HDA1P53973 ZRG8YER033C 3231 nt2.52□□□□□ -2.01
HDA1P53973 VMR1YHL035C 4779 nt2.52□□□□□ -2.01
HDA1P53973 SET2YJL168C 2202 nt2.52□□□□□ -2.01
HDA1P53973 CDC53YDL132W 2448 nt2.51□□□□□ -2.01
HDA1P53973 MDM20YOL076W 2391 nt2.51□□□□□ -2.01
HDA1P53973 BRP1YGL007W 378 nt2.51□□□□□ -2.01
HDA1P53973 YJL135WYJL135W 318 nt2.51□□□□□ -2.01
HDA1P53973 YOR015WYOR015W 360 nt2.51□□□□□ -2.01
HDA1P53973 MGM1YOR211C 2646 nt2.51□□□□□ -2.01
HDA1P53973 ORC2YBR060C 1863 nt2.5□□□□□ -2.01
HDA1P53973 YBL008W-AYBL008W-A 240 nt2.5□□□□□ -2.01
HDA1P53973 SWI5YDR146C 2130 nt2.5□□□□□ -2.01
HDA1P53973 YNL018CYNL018C 1839 nt2.49□□□□□ -2.01
HDA1P53973 PSD2YGR170W 3417 nt2.49□□□□□ -2.01
HDA1P53973 YNL338WYNL338W 159 nt2.49□□□□□ -2.01
HDA1P53973 RFX1YLR176C 2436 nt2.49□□□□□ -2.01
HDA1P53973 OLI1Q0130 231 nt2.48□□□□□ -2.01
HDA1P53973 RRT15YLR162W-A 189 nt2.48□□□□□ -2.01
HDA1P53973 IRR1YIL026C 3453 nt2.48□□□□□ -2.01
HDA1P53973 UTP22YGR090W 3714 nt2.47□□□□□ -2.01
HDA1P53973 FAR11YNL127W 2862 nt2.47□□□□□ -2.01
HDA1P53973 NUP170YBL079W 4509 nt2.47□□□□□ -2.01
HDA1P53973 YHR073W-AYHR073W-A 177 nt2.47□□□□□ -2.01
HDA1P53973 INA22YIR024C 651 nt2.47□□□□□ -2.01
HDA1P53973 KRE33YNL132W 3171 nt2.47□□□□□ -2.01
HDA1P53973 VPS13YLL040C 9435 nt2.47□□□□□ -2.01
HDA1P53973 YLR342W-AYLR342W-A 174 nt2.46□□□□□ -2.02
HDA1P53973 YOR394C-AYOR394C-A 168 nt2.46□□□□□ -2.02
HDA1P53973 PHO2YDL106C 1680 nt2.45□□□□□ -2.02
HDA1P53973 EMP24YGL200C 612 nt2.45□□□□□ -2.02
HDA1P53973 RPS29AYLR388W 171 nt2.45□□□□□ -2.02
HDA1P53973 YPR092WYPR092W 306 nt2.45□□□□□ -2.02
HDA1P53973 VPS54YDR027C 2670 nt2.45□□□□□ -2.02
HDA1P53973 PUT3YKL015W 2940 nt2.45□□□□□ -2.02
HDA1P53973 SWA2YDR320C 2007 nt2.45□□□□□ -2.02
HDA1P53973 TOR1YJR066W 7413 nt2.44□□□□□ -2.02
HDA1P53973 AI5_ALPHAQ0070 1893 nt2.44□□□□□ -2.02
HDA1P53973 YCR043CYCR043C 384 nt2.44□□□□□ -2.02
HDA1P53973 snR72snR72 98 nt2.44□□□□□ -2.02
HDA1P53973 TRS130YMR218C 3309 nt2.43□□□□□ -2.02
HDA1P53973 TRA1YHR099W 11235 nt2.43□□□□□ -2.02
HDA1P53973 TRS65YGR166W 1683 nt2.43□□□□□ -2.02
HDA1P53973 SEC5YDR166C 2916 nt2.43□□□□□ -2.02
HDA1P53973 LYS14YDR034C 2373 nt2.43□□□□□ -2.02
HDA1P53973 YER088C-AYER088C-A 324 nt2.42□□□□□ -2.02
HDA1P53973 YJL052C-AYJL052C-A 120 nt2.42□□□□□ -2.02
HDA1P53973 YJL150WYJL150W 303 nt2.42□□□□□ -2.02
HDA1P53973 YBR182C-AYBR182C-A 195 nt2.42□□□□□ -2.02
HDA1P53973 SAP185YJL098W 3177 nt2.42□□□□□ -2.02
HDA1P53973 YCR102W-AYCR102W-A 198 nt2.41□□□□□ -2.02
HDA1P53973 YHR071C-AYHR071C-A 321 nt2.41□□□□□ -2.02
HDA1P53973 YOR218CYOR218C 420 nt2.41□□□□□ -2.02
HDA1P53973 UFD4YKL010C 4452 nt2.4□□□□□ -2.02
HDA1P53973 ATP8Q0080 147 nt2.4□□□□□ -2.03
HDA1P53973 PAU8YAL068C 363 nt2.4□□□□□ -2.03
HDA1P53973 PAU18YLL064C 363 nt2.4□□□□□ -2.03
HDA1P53973 YLR140WYLR140W 327 nt2.4□□□□□ -2.03
HDA1P53973 YMR194C-AYMR194C-A 225 nt2.4□□□□□ -2.03
HDA1P53973 PAU6YNR076W 363 nt2.4□□□□□ -2.03
HDA1P53973 PAU20YOL161C 363 nt2.4□□□□□ -2.03
HDA1P53973 YKU70YMR284W 1809 nt2.39□□□□□ -2.03
HDA1P53973 MPT5YGL178W 2580 nt2.39□□□□□ -2.03
HDA1P53973 NUP100YKL068W 2880 nt2.39□□□□□ -2.03
HDA1P53973 IRC8YJL051W 2469 nt2.39□□□□□ -2.03
HDA1P53973 TFC8YPL007C 1767 nt2.38□□□□□ -2.03
HDA1P53973 YFR016CYFR016C 3702 nt2.38□□□□□ -2.03
HDA1P53973 MNE1YOR350C 1992 nt2.38□□□□□ -2.03
HDA1P53973 RPS27BYHR021C 249 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 37.4 ms