Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YHR214C-BYHR214C-B 5382 nt1.99□□□□□ -2.09
VPS4P52917 OSH6YKR003W 1347 nt1.98□□□□□ -2.09
VPS4P52917 YIL059CYIL059C 366 nt1.98□□□□□ -2.09
VPS4P52917 PAU18YLL064C 363 nt1.98□□□□□ -2.09
VPS4P52917 PAU6YNR076W 363 nt1.98□□□□□ -2.09
VPS4P52917 YPL038W-AYPL038W-A 192 nt1.98□□□□□ -2.09
VPS4P52917 YCL046WYCL046W 324 nt1.98□□□□□ -2.09
VPS4P52917 TFC8YPL007C 1767 nt1.98□□□□□ -2.09
VPS4P52917 YNL144CYNL144C 2223 nt1.97□□□□□ -2.09
VPS4P52917 PAC1YOR269W 1485 nt1.97□□□□□ -2.09
VPS4P52917 PXA2YKL188C 2562 nt1.97□□□□□ -2.09
VPS4P52917 RTP1YMR185W 2946 nt1.97□□□□□ -2.09
VPS4P52917 YHL041WYHL041W 450 nt1.97□□□□□ -2.09
VPS4P52917 YOR072W-AYOR072W-A 249 nt1.97□□□□□ -2.09
VPS4P52917 FMP23YBR047W 528 nt1.97□□□□□ -2.09
VPS4P52917 HDA3YPR179C 1968 nt1.97□□□□□ -2.09
VPS4P52917 YLR035C-AYLR035C-A 3468 nt1.97□□□□□ -2.09
VPS4P52917 NOP53YPL146C 1368 nt1.96□□□□□ -2.1
VPS4P52917 YER088C-AYER088C-A 324 nt1.95□□□□□ -2.1
VPS4P52917 EFR3YMR212C 2349 nt1.95□□□□□ -2.1
VPS4P52917 CFT1YDR301W 4074 nt1.94□□□□□ -2.1
VPS4P52917 SWI6YLR182W 2412 nt1.94□□□□□ -2.1
VPS4P52917 MRPL31YKL138C 396 nt1.94□□□□□ -2.1
VPS4P52917 YAF9YNL107W 681 nt1.94□□□□□ -2.1
VPS4P52917 CDC31YOR257W 486 nt1.94□□□□□ -2.1
VPS4P52917 TIM18YOR297C 579 nt1.94□□□□□ -2.1
VPS4P52917 YPL225WYPL225W 441 nt1.94□□□□□ -2.1
VPS4P52917 SGO1YOR073W 1773 nt1.93□□□□□ -2.1
VPS4P52917 MYO2YOR326W 4725 nt1.93□□□□□ -2.1
VPS4P52917 SAR1YPL218W 573 nt1.93□□□□□ -2.1
VPS4P52917 ADR1YDR216W 3972 nt1.92□□□□□ -2.1
VPS4P52917 ZRG17YNR039C 1818 nt1.92□□□□□ -2.1
VPS4P52917 HIR3YJR140C 4947 nt1.92□□□□□ -2.1
VPS4P52917 CYC7YEL039C 342 nt1.92□□□□□ -2.1
VPS4P52917 RPL40BYKR094C 387 nt1.92□□□□□ -2.1
VPS4P52917 YBR174CYBR174C 315 nt1.92□□□□□ -2.1
VPS4P52917 YGR250CYGR250C 2346 nt1.92□□□□□ -2.1
VPS4P52917 MSC6YOR354C 2079 nt1.92□□□□□ -2.1
VPS4P52917 CFT2YLR115W 2580 nt1.91□□□□□ -2.1
VPS4P52917 HCS1YKL017C 2052 nt1.91□□□□□ -2.1
VPS4P52917 YGR265WYGR265W 411 nt1.91□□□□□ -2.1
VPS4P52917 IRE1YHR079C 3348 nt1.91□□□□□ -2.1
VPS4P52917 UBR2YLR024C 5619 nt1.91□□□□□ -2.1
VPS4P52917 YBP1YBR216C 2025 nt1.91□□□□□ -2.1
VPS4P52917 BPH1YCR032W 6504 nt1.9□□□□□ -2.11
VPS4P52917 LYS14YDR034C 2373 nt1.9□□□□□ -2.11
VPS4P52917 UPS1YLR193C 528 nt1.9□□□□□ -2.11
VPS4P52917 YMR141W-AYMR141W-A 225 nt1.9□□□□□ -2.11
VPS4P52917 NUT2YPR168W 474 nt1.9□□□□□ -2.11
VPS4P52917 CTR9YOL145C 3234 nt1.9□□□□□ -2.11
VPS4P52917 RKM1YPL208W 1752 nt1.9□□□□□ -2.11
VPS4P52917 CSN9YDR179C 489 nt1.89□□□□□ -2.11
VPS4P52917 ABM1YJR108W 372 nt1.89□□□□□ -2.11
VPS4P52917 YKL136WYKL136W 399 nt1.89□□□□□ -2.11
VPS4P52917 MSH6YDR097C 3729 nt1.89□□□□□ -2.11
VPS4P52917 MAK10YEL053C 2202 nt1.89□□□□□ -2.11
VPS4P52917 RFX1YLR176C 2436 nt1.88□□□□□ -2.11
VPS4P52917 YDR003W-AYDR003W-A 123 nt1.88□□□□□ -2.11
VPS4P52917 YDR102CYDR102C 333 nt1.88□□□□□ -2.11
VPS4P52917 YJR011CYJR011C 786 nt1.88□□□□□ -2.11
VPS4P52917 YOP1YPR028W 543 nt1.88□□□□□ -2.11
VPS4P52917 SEC63YOR254C 1992 nt1.88□□□□□ -2.11
VPS4P52917 RLM1YPL089C 2031 nt1.87□□□□□ -2.11
VPS4P52917 TDA9YML081W 3756 nt1.87□□□□□ -2.11
VPS4P52917 ZIP1YDR285W 2628 nt1.86□□□□□ -2.11
VPS4P52917 MSH5YDL154W 2706 nt1.86□□□□□ -2.11
VPS4P52917 CHS1YNL192W 3396 nt1.85□□□□□ -2.11
VPS4P52917 SLY1YDR189W 2001 nt1.85□□□□□ -2.11
VPS4P52917 MEC1YBR136W 7107 nt1.85□□□□□ -2.11
VPS4P52917 RPL35AYDL191W 363 nt1.85□□□□□ -2.11
VPS4P52917 YKL118WYKL118W 312 nt1.85□□□□□ -2.11
VPS4P52917 MUK1YPL070W 1839 nt1.84□□□□□ -2.11
VPS4P52917 HMI1YOL095C 2121 nt1.84□□□□□ -2.11
VPS4P52917 FRK1YPL141C 2598 nt1.84□□□□□ -2.11
VPS4P52917 SRP14YDL092W 441 nt1.84□□□□□ -2.11
VPS4P52917 YHR007C-AYHR007C-A 216 nt1.84□□□□□ -2.11
VPS4P52917 snR51snR51 107 nt1.84□□□□□ -2.11
VPS4P52917 YJR039WYJR039W 3366 nt1.84□□□□□ -2.11
VPS4P52917 NHP2YDL208W 471 nt1.83□□□□□ -2.12
VPS4P52917 RPL38YLR325C 237 nt1.83□□□□□ -2.12
VPS4P52917 RIM20YOR275C 1986 nt1.83□□□□□ -2.12
VPS4P52917 YLR419WYLR419W 4308 nt1.82□□□□□ -2.12
VPS4P52917 TRX1YLR043C 312 nt1.82□□□□□ -2.12
VPS4P52917 YML007C-AYML007C-A 111 nt1.82□□□□□ -2.12
VPS4P52917 RPB10YOR210W 213 nt1.82□□□□□ -2.12
VPS4P52917 YLL032CYLL032C 2478 nt1.82□□□□□ -2.12
VPS4P52917 MVP1YMR004W 1536 nt1.81□□□□□ -2.12
VPS4P52917 CAT8YMR280C 4302 nt1.81□□□□□ -2.12
VPS4P52917 YDR413CYDR413C 576 nt1.81□□□□□ -2.12
VPS4P52917 HTB2YBL002W 396 nt1.81□□□□□ -2.12
VPS4P52917 YSY6YBR162W-A 198 nt1.81□□□□□ -2.12
VPS4P52917 snR36snR36 182 nt1.81□□□□□ -2.12
VPS4P52917 DNF3YMR162C 4971 nt1.81□□□□□ -2.12
VPS4P52917 MDM20YOL076W 2391 nt1.8□□□□□ -2.12
VPS4P52917 PAU3YCR104W 375 nt1.8□□□□□ -2.12
VPS4P52917 PFD1YJL179W 330 nt1.8□□□□□ -2.12
VPS4P52917 MLH3YPL164C 2148 nt1.8□□□□□ -2.12
VPS4P52917 YGR130CYGR130C 2451 nt1.8□□□□□ -2.12
VPS4P52917 PMD1YER132C 5262 nt1.79□□□□□ -2.12
VPS4P52917 SSK2YNR031C 4740 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 120.1 ms