Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YMR172C-AYMR172C-A 384 nt2.31□□□□□ -2.04
RFX1P48743 YNL028WYNL028W 318 nt2.31□□□□□ -2.04
RFX1P48743 ZRG8YER033C 3231 nt2.31□□□□□ -2.04
RFX1P48743 LCD1YDR499W 2244 nt2.3□□□□□ -2.04
RFX1P48743 IRR1YIL026C 3453 nt2.3□□□□□ -2.04
RFX1P48743 SSD1YDR293C 3753 nt2.3□□□□□ -2.04
RFX1P48743 YNL198CYNL198C 303 nt2.3□□□□□ -2.04
RFX1P48743 YCL023CYCL023C 348 nt2.3□□□□□ -2.04
RFX1P48743 MUK1YPL070W 1839 nt2.3□□□□□ -2.04
RFX1P48743 SLM1YIL105C 2061 nt2.3□□□□□ -2.04
RFX1P48743 SET2YJL168C 2202 nt2.3□□□□□ -2.04
RFX1P48743 RPH1YER169W 2391 nt2.3□□□□□ -2.04
RFX1P48743 TFC3YAL001C 3483 nt2.29□□□□□ -2.04
RFX1P48743 SSQ1YLR369W 1974 nt2.29□□□□□ -2.04
RFX1P48743 VTC1YER072W 390 nt2.29□□□□□ -2.04
RFX1P48743 YMR141W-AYMR141W-A 225 nt2.29□□□□□ -2.04
RFX1P48743 IES4YOR189W 351 nt2.29□□□□□ -2.04
RFX1P48743 EDS1YBR033W 2760 nt2.29□□□□□ -2.04
RFX1P48743 INP2YMR163C 2118 nt2.29□□□□□ -2.04
RFX1P48743 INO80YGL150C 4470 nt2.29□□□□□ -2.04
RFX1P48743 CLN3YAL040C 1743 nt2.28□□□□□ -2.04
RFX1P48743 VMR1YHL035C 4779 nt2.28□□□□□ -2.04
RFX1P48743 GPG1YGL121C 381 nt2.28□□□□□ -2.04
RFX1P48743 PAM16YJL104W 450 nt2.28□□□□□ -2.04
RFX1P48743 YJL197C-AYJL197C-A 282 nt2.28□□□□□ -2.04
RFX1P48743 YLR294CYLR294C 330 nt2.28□□□□□ -2.04
RFX1P48743 CSE2YNR010W 450 nt2.28□□□□□ -2.04
RFX1P48743 YLL032CYLL032C 2478 nt2.28□□□□□ -2.04
RFX1P48743 TOF1YNL273W 3717 nt2.28□□□□□ -2.05
RFX1P48743 PHO2YDL106C 1680 nt2.28□□□□□ -2.05
RFX1P48743 PLC1YPL268W 2610 nt2.27□□□□□ -2.05
RFX1P48743 TRS130YMR218C 3309 nt2.27□□□□□ -2.05
RFX1P48743 SLY1YDR189W 2001 nt2.26□□□□□ -2.05
RFX1P48743 YDR286CYDR286C 345 nt2.26□□□□□ -2.05
RFX1P48743 PAU2YEL049W 363 nt2.26□□□□□ -2.05
RFX1P48743 ISD11YER048W-A 285 nt2.26□□□□□ -2.05
RFX1P48743 YGL052WYGL052W 306 nt2.26□□□□□ -2.05
RFX1P48743 SWI5YDR146C 2130 nt2.26□□□□□ -2.05
RFX1P48743 MDM20YOL076W 2391 nt2.25□□□□□ -2.05
RFX1P48743 VIK1YPL253C 1944 nt2.25□□□□□ -2.05
RFX1P48743 YOR394C-AYOR394C-A 168 nt2.25□□□□□ -2.05
RFX1P48743 NPR2YEL062W 1848 nt2.25□□□□□ -2.05
RFX1P48743 UTP22YGR090W 3714 nt2.25□□□□□ -2.05
RFX1P48743 RFX1YLR176C 2436 nt2.25□□□□□ -2.05
RFX1P48743 YCR043CYCR043C 384 nt2.24□□□□□ -2.05
RFX1P48743 SSS1YDR086C 243 nt2.24□□□□□ -2.05
RFX1P48743 YLR120W-AYLR120W-A 102 nt2.24□□□□□ -2.05
RFX1P48743 RPB10YOR210W 213 nt2.24□□□□□ -2.05
RFX1P48743 NUP100YKL068W 2880 nt2.24□□□□□ -2.05
RFX1P48743 NOP14YDL148C 2433 nt2.23□□□□□ -2.05
RFX1P48743 SPT21YMR179W 2277 nt2.23□□□□□ -2.05
RFX1P48743 YRB1YDR002W 606 nt2.23□□□□□ -2.05
RFX1P48743 EMP24YGL200C 612 nt2.23□□□□□ -2.05
RFX1P48743 YJL052C-AYJL052C-A 120 nt2.23□□□□□ -2.05
RFX1P48743 PFD1YJL179W 330 nt2.23□□□□□ -2.05
RFX1P48743 UBR1YGR184C 5853 nt2.23□□□□□ -2.05
RFX1P48743 SAP185YJL098W 3177 nt2.22□□□□□ -2.05
RFX1P48743 STH1YIL126W 4080 nt2.22□□□□□ -2.05
RFX1P48743 TUS1YLR425W 3924 nt2.22□□□□□ -2.05
RFX1P48743 YHR073W-AYHR073W-A 177 nt2.22□□□□□ -2.05
RFX1P48743 YJL182CYJL182C 318 nt2.22□□□□□ -2.05
RFX1P48743 UFD4YKL010C 4452 nt2.22□□□□□ -2.05
RFX1P48743 tF(GAA)QtF(GAA)Q 75 nt2.21□□□□□ -2.06
RFX1P48743 YJL135WYJL135W 318 nt2.21□□□□□ -2.06
RFX1P48743 YKL165C-AYKL165C-A 234 nt2.21□□□□□ -2.06
RFX1P48743 PAU8YAL068C 363 nt2.21□□□□□ -2.06
RFX1P48743 YMR321CYMR321C 318 nt2.21□□□□□ -2.06
RFX1P48743 PAU20YOL161C 363 nt2.21□□□□□ -2.06
RFX1P48743 MET18YIL128W 3099 nt2.21□□□□□ -2.06
RFX1P48743 YFR016CYFR016C 3702 nt2.2□□□□□ -2.06
RFX1P48743 PDE2YOR360C 1581 nt2.2□□□□□ -2.06
RFX1P48743 YDL185C-AYDL185C-A 228 nt2.2□□□□□ -2.06
RFX1P48743 TIM9YEL020W-A 264 nt2.2□□□□□ -2.06
RFX1P48743 YOR011W-AYOR011W-A 207 nt2.2□□□□□ -2.06
RFX1P48743 YOR302WYOR302W 78 nt2.2□□□□□ -2.06
RFX1P48743 GIP3YPL137C 3831 nt2.2□□□□□ -2.06
RFX1P48743 RAV1YJR033C 4074 nt2.2□□□□□ -2.06
RFX1P48743 LYS14YDR034C 2373 nt2.2□□□□□ -2.06
RFX1P48743 MNE1YOR350C 1992 nt2.19□□□□□ -2.06
RFX1P48743 MRP10YDL045W-A 288 nt2.19□□□□□ -2.06
RFX1P48743 INA22YIR024C 651 nt2.19□□□□□ -2.06
RFX1P48743 PAU18YLL064C 363 nt2.19□□□□□ -2.06
RFX1P48743 YLR466C-BYLR466C-B 117 nt2.19□□□□□ -2.06
RFX1P48743 PAU6YNR076W 363 nt2.19□□□□□ -2.06
RFX1P48743 YOR015WYOR015W 360 nt2.19□□□□□ -2.06
RFX1P48743 UBP2YOR124C 3819 nt2.19□□□□□ -2.06
RFX1P48743 SPP41YDR464W 4308 nt2.18□□□□□ -2.06
RFX1P48743 YCR102W-AYCR102W-A 198 nt2.18□□□□□ -2.06
RFX1P48743 BRP1YGL007W 378 nt2.18□□□□□ -2.06
RFX1P48743 YHR071C-AYHR071C-A 321 nt2.18□□□□□ -2.06
RFX1P48743 VPS8YAL002W 3825 nt2.18□□□□□ -2.06
RFX1P48743 RPS17AYML024W 411 nt2.18□□□□□ -2.06
RFX1P48743 BRE1YDL074C 2103 nt2.18□□□□□ -2.06
RFX1P48743 snR72snR72 98 nt2.17□□□□□ -2.06
RFX1P48743 VPS55YJR044C 423 nt2.17□□□□□ -2.06
RFX1P48743 ATP7YKL016C 525 nt2.17□□□□□ -2.06
RFX1P48743 BNI1YNL271C 5862 nt2.17□□□□□ -2.06
RFX1P48743 TFC8YPL007C 1767 nt2.16□□□□□ -2.06
RFX1P48743 YGR151CYGR151C 336 nt2.16□□□□□ -2.06
RFX1P48743 VPS54YDR027C 2670 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 144.7 ms