Protein–RNA interactions for Protein: P48237

CCM1, Mitochondrial group I intron splicing factor CCM1, yeastyeast

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCM1P48237 YOR302WYOR302W 78 nt2.6□□□□□ -1.99
CCM1P48237 MSB1YOR188W 3414 nt2.6□□□□□ -1.99
CCM1P48237 MLH1YMR167W 2310 nt2.59□□□□□ -1.99
CCM1P48237 RPH1YER169W 2391 nt2.59□□□□□ -1.99
CCM1P48237 IRR1YIL026C 3453 nt2.59□□□□□ -1.99
CCM1P48237 SSS1YDR086C 243 nt2.59□□□□□ -1.99
CCM1P48237 PAU2YEL049W 363 nt2.59□□□□□ -1.99
CCM1P48237 YLR120W-AYLR120W-A 102 nt2.59□□□□□ -1.99
CCM1P48237 YMR230W-AYMR230W-A 189 nt2.59□□□□□ -1.99
CCM1P48237 YOR015WYOR015W 360 nt2.59□□□□□ -1.99
CCM1P48237 PLC1YPL268W 2610 nt2.59□□□□□ -1.99
CCM1P48237 SVL3YPL032C 2478 nt2.59□□□□□ -2
CCM1P48237 YNL018CYNL018C 1839 nt2.58□□□□□ -2
CCM1P48237 SET2YJL168C 2202 nt2.58□□□□□ -2
CCM1P48237 ISD11YER048W-A 285 nt2.58□□□□□ -2
CCM1P48237 tF(GAA)QtF(GAA)Q 75 nt2.57□□□□□ -2
CCM1P48237 INA22YIR024C 651 nt2.57□□□□□ -2
CCM1P48237 PFD1YJL179W 330 nt2.57□□□□□ -2
CCM1P48237 VIK1YPL253C 1944 nt2.57□□□□□ -2
CCM1P48237 EDS1YBR033W 2760 nt2.57□□□□□ -2
CCM1P48237 COS111YBR203W 2775 nt2.57□□□□□ -2
CCM1P48237 INP2YMR163C 2118 nt2.57□□□□□ -2
CCM1P48237 SPF1YEL031W 3648 nt2.56□□□□□ -2
CCM1P48237 MUK1YPL070W 1839 nt2.56□□□□□ -2
CCM1P48237 SCP160YJL080C 3669 nt2.56□□□□□ -2
CCM1P48237 TOF1YNL273W 3717 nt2.56□□□□□ -2
CCM1P48237 YDR286CYDR286C 345 nt2.56□□□□□ -2
CCM1P48237 YJL182CYJL182C 318 nt2.56□□□□□ -2
CCM1P48237 YMR321CYMR321C 318 nt2.56□□□□□ -2
CCM1P48237 SLM1YIL105C 2061 nt2.55□□□□□ -2
CCM1P48237 YJL135WYJL135W 318 nt2.55□□□□□ -2
CCM1P48237 YKL165C-AYKL165C-A 234 nt2.55□□□□□ -2
CCM1P48237 SWI6YLR182W 2412 nt2.55□□□□□ -2
CCM1P48237 YOR011W-AYOR011W-A 207 nt2.55□□□□□ -2
CCM1P48237 REV3YPL167C 4515 nt2.55□□□□□ -2
CCM1P48237 SCD5YOR329C 2619 nt2.55□□□□□ -2
CCM1P48237 YCR043CYCR043C 384 nt2.54□□□□□ -2
CCM1P48237 YLR466C-BYLR466C-B 117 nt2.54□□□□□ -2
CCM1P48237 TRA1YHR099W 11235 nt2.54□□□□□ -2
CCM1P48237 VPS13YLL040C 9435 nt2.54□□□□□ -2
CCM1P48237 UBP1YDL122W 2430 nt2.53□□□□□ -2
CCM1P48237 YRB1YDR002W 606 nt2.53□□□□□ -2
CCM1P48237 ZRG8YER033C 3231 nt2.53□□□□□ -2.01
CCM1P48237 SWI5YDR146C 2130 nt2.53□□□□□ -2.01
CCM1P48237 RFX1YLR176C 2436 nt2.52□□□□□ -2.01
CCM1P48237 SPT21YMR179W 2277 nt2.52□□□□□ -2.01
CCM1P48237 NUP170YBL079W 4509 nt2.52□□□□□ -2.01
CCM1P48237 RGA1YOR127W 3024 nt2.52□□□□□ -2.01
CCM1P48237 SMC6YLR383W 3345 nt2.52□□□□□ -2.01
CCM1P48237 UBR1YGR184C 5853 nt2.52□□□□□ -2.01
CCM1P48237 MMS22YLR320W 4365 nt2.52□□□□□ -2.01
CCM1P48237 YDL185C-AYDL185C-A 228 nt2.51□□□□□ -2.01
CCM1P48237 PAU8YAL068C 363 nt2.51□□□□□ -2.01
CCM1P48237 PAU18YLL064C 363 nt2.51□□□□□ -2.01
CCM1P48237 PAU6YNR076W 363 nt2.51□□□□□ -2.01
CCM1P48237 PAU20YOL161C 363 nt2.51□□□□□ -2.01
CCM1P48237 PDE2YOR360C 1581 nt2.51□□□□□ -2.01
CCM1P48237 YOL098CYOL098C 3114 nt2.51□□□□□ -2.01
CCM1P48237 APL5YPL195W 2799 nt2.51□□□□□ -2.01
CCM1P48237 MPT5YGL178W 2580 nt2.51□□□□□ -2.01
CCM1P48237 snR72snR72 98 nt2.5□□□□□ -2.01
CCM1P48237 YGR151CYGR151C 336 nt2.5□□□□□ -2.01
CCM1P48237 YHR073W-AYHR073W-A 177 nt2.5□□□□□ -2.01
CCM1P48237 YHR180W-AYHR180W-A 183 nt2.5□□□□□ -2.01
CCM1P48237 LYS14YDR034C 2373 nt2.49□□□□□ -2.01
CCM1P48237 VTC1YER072W 390 nt2.49□□□□□ -2.01
CCM1P48237 RPB10YOR210W 213 nt2.49□□□□□ -2.01
CCM1P48237 AI5_ALPHAQ0070 1893 nt2.49□□□□□ -2.01
CCM1P48237 VPS54YDR027C 2670 nt2.48□□□□□ -2.01
CCM1P48237 MET18YIL128W 3099 nt2.48□□□□□ -2.01
CCM1P48237 DNF1YER166W 4716 nt2.47□□□□□ -2.01
CCM1P48237 YCL046WYCL046W 324 nt2.47□□□□□ -2.01
CCM1P48237 SLY1YDR189W 2001 nt2.46□□□□□ -2.02
CCM1P48237 EMP24YGL200C 612 nt2.46□□□□□ -2.02
CCM1P48237 MNE1YOR350C 1992 nt2.46□□□□□ -2.02
CCM1P48237 NIP100YPL174C 2607 nt2.46□□□□□ -2.02
CCM1P48237 NUP100YKL068W 2880 nt2.46□□□□□ -2.02
CCM1P48237 TFC3YAL001C 3483 nt2.45□□□□□ -2.02
CCM1P48237 YHR071C-AYHR071C-A 321 nt2.45□□□□□ -2.02
CCM1P48237 YLR154W-AYLR154W-A 186 nt2.45□□□□□ -2.02
CCM1P48237 VPS55YJR044C 423 nt2.44□□□□□ -2.02
CCM1P48237 RRT15YLR162W-A 189 nt2.44□□□□□ -2.02
CCM1P48237 RPS17AYML024W 411 nt2.44□□□□□ -2.02
CCM1P48237 YPR092WYPR092W 306 nt2.44□□□□□ -2.02
CCM1P48237 SAP190YKR028W 3102 nt2.44□□□□□ -2.02
CCM1P48237 CLN3YAL040C 1743 nt2.44□□□□□ -2.02
CCM1P48237 YPR097WYPR097W 3222 nt2.44□□□□□ -2.02
CCM1P48237 TIM9YEL020W-A 264 nt2.43□□□□□ -2.02
CCM1P48237 VPS8YAL002W 3825 nt2.43□□□□□ -2.02
CCM1P48237 YOL160WYOL160W 342 nt2.43□□□□□ -2.02
CCM1P48237 SPC98YNL126W 2541 nt2.42□□□□□ -2.02
CCM1P48237 YDR003W-AYDR003W-A 123 nt2.42□□□□□ -2.02
CCM1P48237 Q0092Q0092 141 nt2.42□□□□□ -2.02
CCM1P48237 IRA2YOL081W 9240 nt2.41□□□□□ -2.02
CCM1P48237 YJL150WYJL150W 303 nt2.41□□□□□ -2.02
CCM1P48237 ZRG17YNR039C 1818 nt2.4□□□□□ -2.02
CCM1P48237 IRC8YJL051W 2469 nt2.4□□□□□ -2.03
CCM1P48237 snR74snR74 88 nt2.4□□□□□ -2.03
CCM1P48237 YER088C-AYER088C-A 324 nt2.4□□□□□ -2.03
CCM1P48237 OLI1Q0130 231 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 123.6 ms