Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 YDL185C-AYDL185C-A 228 nt2.22□□□□□ -2.05
NMD5P46970 TIM9YEL020W-A 264 nt2.22□□□□□ -2.05
NMD5P46970 YGL052WYGL052W 306 nt2.22□□□□□ -2.05
NMD5P46970 YMR172C-AYMR172C-A 384 nt2.22□□□□□ -2.05
NMD5P46970 NUT2YPR168W 474 nt2.22□□□□□ -2.05
NMD5P46970 BNI1YNL271C 5862 nt2.22□□□□□ -2.05
NMD5P46970 SEC16YPL085W 6588 nt2.21□□□□□ -2.05
NMD5P46970 PEX8YGR077C 1770 nt2.21□□□□□ -2.06
NMD5P46970 SPP41YDR464W 4308 nt2.21□□□□□ -2.06
NMD5P46970 YMR321CYMR321C 318 nt2.21□□□□□ -2.06
NMD5P46970 YOR015WYOR015W 360 nt2.21□□□□□ -2.06
NMD5P46970 YOR333CYOR333C 417 nt2.21□□□□□ -2.06
NMD5P46970 YBR277CYBR277C 402 nt2.21□□□□□ -2.06
NMD5P46970 NOP53YPL146C 1368 nt2.21□□□□□ -2.06
NMD5P46970 SEC31YDL195W 3822 nt2.2□□□□□ -2.06
NMD5P46970 STH1YIL126W 4080 nt2.2□□□□□ -2.06
NMD5P46970 FMP16YDR070C 282 nt2.2□□□□□ -2.06
NMD5P46970 YLR255CYLR255C 354 nt2.2□□□□□ -2.06
NMD5P46970 NUP120YKL057C 3114 nt2.2□□□□□ -2.06
NMD5P46970 UBP2YOR124C 3819 nt2.2□□□□□ -2.06
NMD5P46970 MDM20YOL076W 2391 nt2.2□□□□□ -2.06
NMD5P46970 BRE1YDL074C 2103 nt2.19□□□□□ -2.06
NMD5P46970 SSS1YDR086C 243 nt2.19□□□□□ -2.06
NMD5P46970 YLR154W-AYLR154W-A 186 nt2.19□□□□□ -2.06
NMD5P46970 YMR230W-AYMR230W-A 189 nt2.19□□□□□ -2.06
NMD5P46970 YNL028WYNL028W 318 nt2.19□□□□□ -2.06
NMD5P46970 CSE2YNR010W 450 nt2.19□□□□□ -2.06
NMD5P46970 YBR224WYBR224W 516 nt2.19□□□□□ -2.06
NMD5P46970 YPR097WYPR097W 3222 nt2.19□□□□□ -2.06
NMD5P46970 YLR149CYLR149C 2193 nt2.18□□□□□ -2.06
NMD5P46970 YDL007C-AYDL007C-A 258 nt2.18□□□□□ -2.06
NMD5P46970 tF(GAA)QtF(GAA)Q 75 nt2.18□□□□□ -2.06
NMD5P46970 YHR180W-AYHR180W-A 183 nt2.18□□□□□ -2.06
NMD5P46970 YLR120W-AYLR120W-A 102 nt2.18□□□□□ -2.06
NMD5P46970 RPS17AYML024W 411 nt2.18□□□□□ -2.06
NMD5P46970 EFR3YMR212C 2349 nt2.18□□□□□ -2.06
NMD5P46970 VPH1YOR270C 2523 nt2.18□□□□□ -2.06
NMD5P46970 SEF1YBL066C 3447 nt2.17□□□□□ -2.06
NMD5P46970 CFT2YLR115W 2580 nt2.17□□□□□ -2.06
NMD5P46970 ATP8Q0080 147 nt2.17□□□□□ -2.06
NMD5P46970 YJL150WYJL150W 303 nt2.17□□□□□ -2.06
NMD5P46970 YPR002C-AYPR002C-A 198 nt2.17□□□□□ -2.06
NMD5P46970 VPS34YLR240W 2628 nt2.17□□□□□ -2.06
NMD5P46970 VIK1YPL253C 1944 nt2.17□□□□□ -2.06
NMD5P46970 SSQ1YLR369W 1974 nt2.16□□□□□ -2.06
NMD5P46970 INA22YIR024C 651 nt2.16□□□□□ -2.06
NMD5P46970 YJL135WYJL135W 318 nt2.16□□□□□ -2.06
NMD5P46970 TRX1YLR043C 312 nt2.16□□□□□ -2.06
NMD5P46970 AFI1YOR129C 2682 nt2.16□□□□□ -2.06
NMD5P46970 COS111YBR203W 2775 nt2.15□□□□□ -2.06
NMD5P46970 TRS65YGR166W 1683 nt2.15□□□□□ -2.06
NMD5P46970 GRR1YJR090C 3456 nt2.15□□□□□ -2.06
NMD5P46970 YBR184WYBR184W 1572 nt2.15□□□□□ -2.06
NMD5P46970 SNF5YBR289W 2718 nt2.15□□□□□ -2.06
NMD5P46970 VMR1YHL035C 4779 nt2.15□□□□□ -2.06
NMD5P46970 VTC1YER072W 390 nt2.15□□□□□ -2.07
NMD5P46970 YER088C-AYER088C-A 324 nt2.15□□□□□ -2.07
NMD5P46970 LCD1YDR499W 2244 nt2.15□□□□□ -2.07
NMD5P46970 TOR2YKL203C 7425 nt2.15□□□□□ -2.07
NMD5P46970 CDC27YBL084C 2277 nt2.15□□□□□ -2.07
NMD5P46970 PEP3YLR148W 2757 nt2.15□□□□□ -2.07
NMD5P46970 SMY1YKL079W 1971 nt2.14□□□□□ -2.07
NMD5P46970 RAV1YJR033C 4074 nt2.14□□□□□ -2.07
NMD5P46970 RRP6YOR001W 2202 nt2.14□□□□□ -2.07
NMD5P46970 UBR1YGR184C 5853 nt2.14□□□□□ -2.07
NMD5P46970 AI5_ALPHAQ0070 1893 nt2.14□□□□□ -2.07
NMD5P46970 YEL014CYEL014C 306 nt2.13□□□□□ -2.07
NMD5P46970 RPL42BYHR141C 321 nt2.13□□□□□ -2.07
NMD5P46970 SNC1YAL030W 354 nt2.13□□□□□ -2.07
NMD5P46970 RPL42AYNL162W 321 nt2.13□□□□□ -2.07
NMD5P46970 PDE2YOR360C 1581 nt2.13□□□□□ -2.07
NMD5P46970 PXA2YKL188C 2562 nt2.12□□□□□ -2.07
NMD5P46970 RIC1YLR039C 3171 nt2.12□□□□□ -2.07
NMD5P46970 STB4YMR019W 2850 nt2.12□□□□□ -2.07
NMD5P46970 SPO22YIL073C 2928 nt2.11□□□□□ -2.07
NMD5P46970 SPT21YMR179W 2277 nt2.11□□□□□ -2.07
NMD5P46970 PLC1YPL268W 2610 nt2.11□□□□□ -2.07
NMD5P46970 BRP1YGL007W 378 nt2.11□□□□□ -2.07
NMD5P46970 KAP123YER110C 3342 nt2.11□□□□□ -2.07
NMD5P46970 FKS1YLR342W 5631 nt2.1□□□□□ -2.07
NMD5P46970 YLR146W-AYLR146W-A 189 nt2.1□□□□□ -2.07
NMD5P46970 YOR394C-AYOR394C-A 168 nt2.1□□□□□ -2.07
NMD5P46970 USO1YDL058W 5373 nt2.1□□□□□ -2.07
NMD5P46970 NEO1YIL048W 3456 nt2.1□□□□□ -2.07
NMD5P46970 YDR286CYDR286C 345 nt2.09□□□□□ -2.07
NMD5P46970 OLI1Q0130 231 nt2.09□□□□□ -2.07
NMD5P46970 VPS55YJR044C 423 nt2.09□□□□□ -2.07
NMD5P46970 ATP7YKL016C 525 nt2.09□□□□□ -2.07
NMD5P46970 YLR342W-AYLR342W-A 174 nt2.09□□□□□ -2.07
NMD5P46970 YBL083CYBL083C 426 nt2.09□□□□□ -2.07
NMD5P46970 INP2YMR163C 2118 nt2.09□□□□□ -2.08
NMD5P46970 MNL2YLR057W 2550 nt2.08□□□□□ -2.08
NMD5P46970 GIP3YPL137C 3831 nt2.08□□□□□ -2.08
NMD5P46970 ELG1YOR144C 2376 nt2.08□□□□□ -2.08
NMD5P46970 MET18YIL128W 3099 nt2.08□□□□□ -2.08
NMD5P46970 PRP39YML046W 1890 nt2.08□□□□□ -2.08
NMD5P46970 snR72snR72 98 nt2.08□□□□□ -2.08
NMD5P46970 YDL118WYDL118W 381 nt2.08□□□□□ -2.08
NMD5P46970 YLR140WYLR140W 327 nt2.08□□□□□ -2.08
NMD5P46970 YNL114CYNL114C 372 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms