Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 NOP53YPL146C 1368 nt1.83□□□□□ -2.12
RPH1P39956 VPS8YAL002W 3825 nt1.82□□□□□ -2.12
RPH1P39956 DBP6YNR038W 1890 nt1.82□□□□□ -2.12
RPH1P39956 YDR286CYDR286C 345 nt1.82□□□□□ -2.12
RPH1P39956 UPS1YLR193C 528 nt1.82□□□□□ -2.12
RPH1P39956 TMA7YLR262C-A 195 nt1.82□□□□□ -2.12
RPH1P39956 YPL152W-AYPL152W-A 99 nt1.82□□□□□ -2.12
RPH1P39956 YOP1YPR028W 543 nt1.82□□□□□ -2.12
RPH1P39956 NUT2YPR168W 474 nt1.82□□□□□ -2.12
RPH1P39956 CDC60YPL160W 3273 nt1.82□□□□□ -2.12
RPH1P39956 OST1YJL002C 1431 nt1.82□□□□□ -2.12
RPH1P39956 RTT107YHR154W 3213 nt1.81□□□□□ -2.12
RPH1P39956 RIM20YOR275C 1986 nt1.81□□□□□ -2.12
RPH1P39956 YMR045CYMR045C 5268 nt1.81□□□□□ -2.12
RPH1P39956 MYO2YOR326W 4725 nt1.81□□□□□ -2.12
RPH1P39956 RPL38YLR325C 237 nt1.81□□□□□ -2.12
RPH1P39956 YMR141W-AYMR141W-A 225 nt1.81□□□□□ -2.12
RPH1P39956 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
RPH1P39956 TUS1YLR425W 3924 nt1.81□□□□□ -2.12
RPH1P39956 SLM1YIL105C 2061 nt1.81□□□□□ -2.12
RPH1P39956 EFR3YMR212C 2349 nt1.8□□□□□ -2.12
RPH1P39956 YIL102CYIL102C 306 nt1.8□□□□□ -2.12
RPH1P39956 YNL114CYNL114C 372 nt1.8□□□□□ -2.12
RPH1P39956 MGA2YIR033W 3342 nt1.8□□□□□ -2.12
RPH1P39956 PXA2YKL188C 2562 nt1.8□□□□□ -2.12
RPH1P39956 CHC1YGL206C 4962 nt1.79□□□□□ -2.12
RPH1P39956 NPC2YDL046W 522 nt1.79□□□□□ -2.12
RPH1P39956 CYC7YEL039C 342 nt1.79□□□□□ -2.12
RPH1P39956 YGR069WYGR069W 336 nt1.79□□□□□ -2.12
RPH1P39956 YHR210CYHR210C 1026 nt1.79□□□□□ -2.12
RPH1P39956 YJL015CYJL015C 285 nt1.79□□□□□ -2.12
RPH1P39956 YLR053CYLR053C 327 nt1.79□□□□□ -2.12
RPH1P39956 YLR146W-AYLR146W-A 189 nt1.79□□□□□ -2.12
RPH1P39956 YML007C-AYML007C-A 111 nt1.79□□□□□ -2.12
RPH1P39956 MNE1YOR350C 1992 nt1.79□□□□□ -2.12
RPH1P39956 LHS1YKL073W 2646 nt1.79□□□□□ -2.12
RPH1P39956 UTP21YLR409C 2820 nt1.78□□□□□ -2.12
RPH1P39956 YCR043CYCR043C 384 nt1.78□□□□□ -2.12
RPH1P39956 YMR247W-AYMR247W-A 144 nt1.78□□□□□ -2.12
RPH1P39956 CFT2YLR115W 2580 nt1.78□□□□□ -2.12
RPH1P39956 MET18YIL128W 3099 nt1.77□□□□□ -2.13
RPH1P39956 YDL062WYDL062W 426 nt1.77□□□□□ -2.13
RPH1P39956 YDR344CYDR344C 444 nt1.77□□□□□ -2.13
RPH1P39956 YDR426CYDR426C 378 nt1.77□□□□□ -2.13
RPH1P39956 PCC1YKR095W-A 267 nt1.77□□□□□ -2.13
RPH1P39956 YOR343W-BYOR343W-B 5313 nt1.77□□□□□ -2.13
RPH1P39956 RPH1YER169W 2391 nt1.77□□□□□ -2.13
RPH1P39956 RTP1YMR185W 2946 nt1.77□□□□□ -2.13
RPH1P39956 MVP1YMR004W 1536 nt1.76□□□□□ -2.13
RPH1P39956 SWI5YDR146C 2130 nt1.76□□□□□ -2.13
RPH1P39956 TRL1YJL087C 2484 nt1.76□□□□□ -2.13
RPH1P39956 ALG13YGL047W 609 nt1.76□□□□□ -2.13
RPH1P39956 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
RPH1P39956 YIL032CYIL032C 357 nt1.76□□□□□ -2.13
RPH1P39956 YKL183C-AYKL183C-A 213 nt1.76□□□□□ -2.13
RPH1P39956 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
RPH1P39956 ZRG8YER033C 3231 nt1.75□□□□□ -2.13
RPH1P39956 SWI6YLR182W 2412 nt1.75□□□□□ -2.13
RPH1P39956 MCM22YJR135C 720 nt1.75□□□□□ -2.13
RPH1P39956 SFB2YNL049C 2631 nt1.75□□□□□ -2.13
RPH1P39956 MEC1YBR136W 7107 nt1.74□□□□□ -2.13
RPH1P39956 HSH155YMR288W 2916 nt1.74□□□□□ -2.13
RPH1P39956 PAU18YLL064C 363 nt1.74□□□□□ -2.13
RPH1P39956 PAU6YNR076W 363 nt1.74□□□□□ -2.13
RPH1P39956 YPR002C-AYPR002C-A 198 nt1.74□□□□□ -2.13
RPH1P39956 YCL046WYCL046W 324 nt1.74□□□□□ -2.13
RPH1P39956 TRM3YDL112W 4311 nt1.74□□□□□ -2.13
RPH1P39956 ARP7YPR034W 1434 nt1.74□□□□□ -2.13
RPH1P39956 IRR1YIL026C 3453 nt1.74□□□□□ -2.13
RPH1P39956 RAD61YDR014W 1944 nt1.74□□□□□ -2.13
RPH1P39956 YHR073W-AYHR073W-A 177 nt1.73□□□□□ -2.13
RPH1P39956 YPR063CYPR063C 423 nt1.73□□□□□ -2.13
RPH1P39956 UBR2YLR024C 5619 nt1.73□□□□□ -2.13
RPH1P39956 HER1YOR227W 3741 nt1.73□□□□□ -2.13
RPH1P39956 NUP192YJL039C 5052 nt1.73□□□□□ -2.13
RPH1P39956 SAC3YDR159W 3906 nt1.73□□□□□ -2.13
RPH1P39956 CAT2YML042W 2013 nt1.73□□□□□ -2.13
RPH1P39956 YDL211CYDL211C 1119 nt1.72□□□□□ -2.13
RPH1P39956 YHL042WYHL042W 453 nt1.72□□□□□ -2.13
RPH1P39956 YJL135WYJL135W 318 nt1.72□□□□□ -2.13
RPH1P39956 YNL144CYNL144C 2223 nt1.72□□□□□ -2.13
RPH1P39956 YDR341CYDR341C 1824 nt1.72□□□□□ -2.13
RPH1P39956 IRC20YLR247C 4671 nt1.72□□□□□ -2.13
RPH1P39956 BRR2YER172C 6492 nt1.71□□□□□ -2.14
RPH1P39956 MUK1YPL070W 1839 nt1.71□□□□□ -2.14
RPH1P39956 YGR250CYGR250C 2346 nt1.71□□□□□ -2.14
RPH1P39956 snR60snR60 104 nt1.71□□□□□ -2.14
RPH1P39956 YEL020C-BYEL020C-B 198 nt1.71□□□□□ -2.14
RPH1P39956 YLR035C-AYLR035C-A 3468 nt1.71□□□□□ -2.14
RPH1P39956 PLC1YPL268W 2610 nt1.71□□□□□ -2.14
RPH1P39956 RFX1YLR176C 2436 nt1.71□□□□□ -2.14
RPH1P39956 COG8YML071C 1824 nt1.7□□□□□ -2.14
RPH1P39956 LYS14YDR034C 2373 nt1.7□□□□□ -2.14
RPH1P39956 DNF3YMR162C 4971 nt1.7□□□□□ -2.14
RPH1P39956 snR80snR80 171 nt1.7□□□□□ -2.14
RPH1P39956 YGL188C-AYGL188C-A 141 nt1.7□□□□□ -2.14
RPH1P39956 YKR075W-AYKR075W-A 270 nt1.7□□□□□ -2.14
RPH1P39956 TRX1YLR043C 312 nt1.7□□□□□ -2.14
RPH1P39956 CYB5YNL111C 363 nt1.7□□□□□ -2.14
RPH1P39956 RPB10YOR210W 213 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 48.7 ms