Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 RPS27BYHR021C 249 nt2.42□□□□□ -2.02
TDP1P38319 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
TDP1P38319 PDR1YGL013C 3207 nt2.42□□□□□ -2.02
TDP1P38319 PLC1YPL268W 2610 nt2.42□□□□□ -2.02
TDP1P38319 SMY2YBR172C 2223 nt2.42□□□□□ -2.02
TDP1P38319 SLN1YIL147C 3663 nt2.42□□□□□ -2.02
TDP1P38319 SWA2YDR320C 2007 nt2.42□□□□□ -2.02
TDP1P38319 SPT21YMR179W 2277 nt2.42□□□□□ -2.02
TDP1P38319 CSF1YLR087C 8877 nt2.41□□□□□ -2.02
TDP1P38319 YEL043WYEL043W 2871 nt2.41□□□□□ -2.02
TDP1P38319 FAR11YNL127W 2862 nt2.41□□□□□ -2.02
TDP1P38319 RPS29AYLR388W 171 nt2.41□□□□□ -2.02
TDP1P38319 YKU80YMR106C 1890 nt2.41□□□□□ -2.02
TDP1P38319 NOP53YPL146C 1368 nt2.4□□□□□ -2.02
TDP1P38319 SIR3YLR442C 2937 nt2.4□□□□□ -2.03
TDP1P38319 EFR3YMR212C 2349 nt2.4□□□□□ -2.03
TDP1P38319 MUK1YPL070W 1839 nt2.4□□□□□ -2.03
TDP1P38319 TAE2YPL009C 3117 nt2.39□□□□□ -2.03
TDP1P38319 GIS1YDR096W 2685 nt2.39□□□□□ -2.03
TDP1P38319 STE11YLR362W 2154 nt2.39□□□□□ -2.03
TDP1P38319 SVL3YPL032C 2478 nt2.39□□□□□ -2.03
TDP1P38319 NOP10YHR072W-A 177 nt2.39□□□□□ -2.03
TDP1P38319 YDR186CYDR186C 2634 nt2.38□□□□□ -2.03
TDP1P38319 SSQ1YLR369W 1974 nt2.38□□□□□ -2.03
TDP1P38319 SGF11YPL047W 300 nt2.38□□□□□ -2.03
TDP1P38319 SPF1YEL031W 3648 nt2.38□□□□□ -2.03
TDP1P38319 VPH1YOR270C 2523 nt2.37□□□□□ -2.03
TDP1P38319 ORC2YBR060C 1863 nt2.37□□□□□ -2.03
TDP1P38319 RRP6YOR001W 2202 nt2.37□□□□□ -2.03
TDP1P38319 YHR032W-AYHR032W-A 180 nt2.37□□□□□ -2.03
TDP1P38319 YOR161W-BYOR161W-B 261 nt2.36□□□□□ -2.03
TDP1P38319 UBR1YGR184C 5853 nt2.36□□□□□ -2.03
TDP1P38319 VPS34YLR240W 2628 nt2.36□□□□□ -2.03
TDP1P38319 INP2YMR163C 2118 nt2.35□□□□□ -2.03
TDP1P38319 YLR149CYLR149C 2193 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)G1tW(CCA)G1 72 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)G2tW(CCA)G2 72 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)JtW(CCA)J 72 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)KtW(CCA)K 72 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)MtW(CCA)M 72 nt2.35□□□□□ -2.03
TDP1P38319 tW(CCA)PtW(CCA)P 72 nt2.35□□□□□ -2.03
TDP1P38319 SNC1YAL030W 354 nt2.35□□□□□ -2.03
TDP1P38319 snR43snR43 209 nt2.35□□□□□ -2.03
TDP1P38319 SEF1YBL066C 3447 nt2.35□□□□□ -2.03
TDP1P38319 TRS130YMR218C 3309 nt2.34□□□□□ -2.03
TDP1P38319 MPT5YGL178W 2580 nt2.34□□□□□ -2.03
TDP1P38319 KRE33YNL132W 3171 nt2.34□□□□□ -2.03
TDP1P38319 snR70snR70 164 nt2.34□□□□□ -2.03
TDP1P38319 YIL156W-BYIL156W-B 222 nt2.34□□□□□ -2.03
TDP1P38319 YBL053WYBL053W 375 nt2.34□□□□□ -2.03
TDP1P38319 NAB6YML117W 3405 nt2.33□□□□□ -2.04
TDP1P38319 COS111YBR203W 2775 nt2.33□□□□□ -2.04
TDP1P38319 PXA2YKL188C 2562 nt2.33□□□□□ -2.04
TDP1P38319 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
TDP1P38319 ULI1YFR026C 510 nt2.33□□□□□ -2.04
TDP1P38319 PAU8YAL068C 363 nt2.33□□□□□ -2.04
TDP1P38319 PAU20YOL161C 363 nt2.33□□□□□ -2.04
TDP1P38319 PTP3YER075C 2787 nt2.33□□□□□ -2.04
TDP1P38319 GRR1YJR090C 3456 nt2.33□□□□□ -2.04
TDP1P38319 AFI1YOR129C 2682 nt2.32□□□□□ -2.04
TDP1P38319 EMC6YLL014W 327 nt2.32□□□□□ -2.04
TDP1P38319 YLR146W-AYLR146W-A 189 nt2.32□□□□□ -2.04
TDP1P38319 NUP100YKL068W 2880 nt2.32□□□□□ -2.04
TDP1P38319 PRP42YDR235W 1635 nt2.31□□□□□ -2.04
TDP1P38319 NEW1YPL226W 3591 nt2.31□□□□□ -2.04
TDP1P38319 EDS1YBR033W 2760 nt2.31□□□□□ -2.04
TDP1P38319 DNF1YER166W 4716 nt2.31□□□□□ -2.04
TDP1P38319 FKS3YMR306W 5358 nt2.31□□□□□ -2.04
TDP1P38319 YBR184WYBR184W 1572 nt2.31□□□□□ -2.04
TDP1P38319 TOF1YNL273W 3717 nt2.31□□□□□ -2.04
TDP1P38319 SPO22YIL073C 2928 nt2.3□□□□□ -2.04
TDP1P38319 KAP123YER110C 3342 nt2.3□□□□□ -2.04
TDP1P38319 ECM12YHR021W-A 456 nt2.3□□□□□ -2.04
TDP1P38319 RPL34BYIL052C 366 nt2.3□□□□□ -2.04
TDP1P38319 YBL109WYBL109W 336 nt2.3□□□□□ -2.04
TDP1P38319 VPS13YLL040C 9435 nt2.3□□□□□ -2.04
TDP1P38319 CLN3YAL040C 1743 nt2.3□□□□□ -2.04
TDP1P38319 PHO91YNR013C 2685 nt2.29□□□□□ -2.04
TDP1P38319 SMY1YKL079W 1971 nt2.29□□□□□ -2.04
TDP1P38319 RAV1YJR033C 4074 nt2.29□□□□□ -2.04
TDP1P38319 SNU13YEL026W 381 nt2.29□□□□□ -2.04
TDP1P38319 YOR218CYOR218C 420 nt2.29□□□□□ -2.04
TDP1P38319 PDR3YBL005W 2931 nt2.29□□□□□ -2.04
TDP1P38319 PEP3YLR148W 2757 nt2.29□□□□□ -2.04
TDP1P38319 YLL007CYLL007C 1998 nt2.29□□□□□ -2.04
TDP1P38319 MSB1YOR188W 3414 nt2.28□□□□□ -2.04
TDP1P38319 CDC53YDL132W 2448 nt2.28□□□□□ -2.04
TDP1P38319 YEL073CYEL073C 324 nt2.28□□□□□ -2.04
TDP1P38319 PDR11YIL013C 4236 nt2.28□□□□□ -2.04
TDP1P38319 PMP1YCR024C-A 123 nt2.27□□□□□ -2.05
TDP1P38319 YKL165C-AYKL165C-A 234 nt2.27□□□□□ -2.05
TDP1P38319 YLR154W-AYLR154W-A 186 nt2.27□□□□□ -2.05
TDP1P38319 RPS17AYML024W 411 nt2.27□□□□□ -2.05
TDP1P38319 YNL114CYNL114C 372 nt2.27□□□□□ -2.05
TDP1P38319 YOR329W-AYOR329W-A 210 nt2.27□□□□□ -2.05
TDP1P38319 SGS1YMR190C 4344 nt2.27□□□□□ -2.05
TDP1P38319 CRM1YGR218W 3255 nt2.27□□□□□ -2.05
TDP1P38319 RPH1YER169W 2391 nt2.26□□□□□ -2.05
TDP1P38319 snR72snR72 98 nt2.26□□□□□ -2.05
TDP1P38319 YDR003W-AYDR003W-A 123 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms