Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 YLR146W-AYLR146W-A 189 nt1.61□□□□□ -2.15
BRF1P29056 YMR001C-AYMR001C-A 231 nt1.61□□□□□ -2.15
BRF1P29056 YOL159CYOL159C 516 nt1.61□□□□□ -2.15
BRF1P29056 PXA2YKL188C 2562 nt1.61□□□□□ -2.15
BRF1P29056 NCA2YPR155C 1851 nt1.6□□□□□ -2.15
BRF1P29056 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
BRF1P29056 PHS1YJL097W 654 nt1.6□□□□□ -2.15
BRF1P29056 HUG1YML058W-A 207 nt1.6□□□□□ -2.15
BRF1P29056 HHT1YBR010W 411 nt1.6□□□□□ -2.15
BRF1P29056 MEC1YBR136W 7107 nt1.59□□□□□ -2.15
BRF1P29056 YJL020W-AYJL020W-A 258 nt1.59□□□□□ -2.15
BRF1P29056 RPS27AYKL156W 249 nt1.59□□□□□ -2.15
BRF1P29056 YLR154W-FYLR154W-F 141 nt1.59□□□□□ -2.15
BRF1P29056 YLR434CYLR434C 384 nt1.59□□□□□ -2.15
BRF1P29056 CDC31YOR257W 486 nt1.59□□□□□ -2.15
BRF1P29056 PIK1YNL267W 3201 nt1.59□□□□□ -2.16
BRF1P29056 SPO23YBR250W 1572 nt1.59□□□□□ -2.16
BRF1P29056 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
BRF1P29056 YBP1YBR216C 2025 nt1.58□□□□□ -2.16
BRF1P29056 YDR003W-AYDR003W-A 123 nt1.58□□□□□ -2.16
BRF1P29056 YHR138CYHR138C 345 nt1.58□□□□□ -2.16
BRF1P29056 RPL9BYNL067W 576 nt1.58□□□□□ -2.16
BRF1P29056 YOP1YPR028W 543 nt1.58□□□□□ -2.16
BRF1P29056 MSN5YDR335W 3675 nt1.58□□□□□ -2.16
BRF1P29056 SWF1YDR126W 1011 nt1.57□□□□□ -2.16
BRF1P29056 RTR1YER139C 681 nt1.57□□□□□ -2.16
BRF1P29056 HIT1YJR055W 495 nt1.57□□□□□ -2.16
BRF1P29056 YAR047CYAR047C 321 nt1.57□□□□□ -2.16
BRF1P29056 LEE1YPL054W 906 nt1.57□□□□□ -2.16
BRF1P29056 LYS14YDR034C 2373 nt1.57□□□□□ -2.16
BRF1P29056 HKR1YDR420W 5409 nt1.57□□□□□ -2.16
BRF1P29056 EST2YLR318W 2655 nt1.56□□□□□ -2.16
BRF1P29056 CAT8YMR280C 4302 nt1.56□□□□□ -2.16
BRF1P29056 KAP122YGL016W 3246 nt1.56□□□□□ -2.16
BRF1P29056 YDR269CYDR269C 324 nt1.56□□□□□ -2.16
BRF1P29056 YFL019CYFL019C 354 nt1.56□□□□□ -2.16
BRF1P29056 YJL015CYJL015C 285 nt1.56□□□□□ -2.16
BRF1P29056 YML003WYML003W 873 nt1.56□□□□□ -2.16
BRF1P29056 YBR285WYBR285W 435 nt1.56□□□□□ -2.16
BRF1P29056 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
BRF1P29056 MLH3YPL164C 2148 nt1.55□□□□□ -2.16
BRF1P29056 AIM9YER080W 1884 nt1.55□□□□□ -2.16
BRF1P29056 RRT1YBL048W 312 nt1.55□□□□□ -2.16
BRF1P29056 YOR053WYOR053W 342 nt1.55□□□□□ -2.16
BRF1P29056 ALK1YGL021W 2283 nt1.55□□□□□ -2.16
BRF1P29056 SWI6YLR182W 2412 nt1.54□□□□□ -2.16
BRF1P29056 YAP6YDR259C 1152 nt1.54□□□□□ -2.16
BRF1P29056 ZIP1YDR285W 2628 nt1.53□□□□□ -2.16
BRF1P29056 YIL059CYIL059C 366 nt1.53□□□□□ -2.16
BRF1P29056 YJL022WYJL022W 309 nt1.53□□□□□ -2.16
BRF1P29056 VPS55YJR044C 423 nt1.53□□□□□ -2.16
BRF1P29056 BSC3YLR465C 309 nt1.53□□□□□ -2.16
BRF1P29056 HCH1YNL281W 462 nt1.53□□□□□ -2.16
BRF1P29056 YPL229WYPL229W 621 nt1.53□□□□□ -2.16
BRF1P29056 RFX1YLR176C 2436 nt1.52□□□□□ -2.17
BRF1P29056 RSM22YKL155C 1887 nt1.52□□□□□ -2.17
BRF1P29056 tQ(UUG)E2tQ(UUG)E2 72 nt1.52□□□□□ -2.17
BRF1P29056 EMC5YIL027C 426 nt1.52□□□□□ -2.17
BRF1P29056 YCS4YLR272C 3531 nt1.52□□□□□ -2.17
BRF1P29056 RPL26AYLR344W 384 nt1.51□□□□□ -2.17
BRF1P29056 ISF1YMR081C 1017 nt1.51□□□□□ -2.17
BRF1P29056 ENV11YGR071C 2583 nt1.51□□□□□ -2.17
BRF1P29056 DGR2YKL121W 2559 nt1.51□□□□□ -2.17
BRF1P29056 PCF11YDR228C 1881 nt1.5□□□□□ -2.17
BRF1P29056 SRP14YDL092W 441 nt1.5□□□□□ -2.17
BRF1P29056 YIL102CYIL102C 306 nt1.5□□□□□ -2.17
BRF1P29056 PFD1YJL179W 330 nt1.5□□□□□ -2.17
BRF1P29056 YKL083WYKL083W 615 nt1.5□□□□□ -2.17
BRF1P29056 EFR3YMR212C 2349 nt1.5□□□□□ -2.17
BRF1P29056 YDR157WYDR157W 402 nt1.49□□□□□ -2.17
BRF1P29056 CYC7YEL039C 342 nt1.49□□□□□ -2.17
BRF1P29056 RPL40BYKR094C 387 nt1.49□□□□□ -2.17
BRF1P29056 COF1YLL050C 432 nt1.49□□□□□ -2.17
BRF1P29056 YLL032CYLL032C 2478 nt1.49□□□□□ -2.17
BRF1P29056 YGR130CYGR130C 2451 nt1.48□□□□□ -2.17
BRF1P29056 PAU2YEL049W 363 nt1.48□□□□□ -2.17
BRF1P29056 YAL068W-AYAL068W-A 255 nt1.48□□□□□ -2.17
BRF1P29056 RRT15YLR162W-A 189 nt1.48□□□□□ -2.17
BRF1P29056 CLU1YMR012W 3834 nt1.48□□□□□ -2.17
BRF1P29056 YOR293C-AYOR293C-A 150 nt1.48□□□□□ -2.17
BRF1P29056 PIG1YLR273C 1947 nt1.48□□□□□ -2.17
BRF1P29056 PBY1YBR094W 2262 nt1.47□□□□□ -2.17
BRF1P29056 YGR174W-AYGR174W-A 87 nt1.47□□□□□ -2.17
BRF1P29056 SLY1YDR189W 2001 nt1.47□□□□□ -2.17
BRF1P29056 YDR118W-AYDR118W-A 117 nt1.46□□□□□ -2.18
BRF1P29056 MRPL31YKL138C 396 nt1.46□□□□□ -2.18
BRF1P29056 NUT2YPR168W 474 nt1.46□□□□□ -2.18
BRF1P29056 UFD2YDL190C 2886 nt1.46□□□□□ -2.18
BRF1P29056 MSH3YCR092C 3057 nt1.46□□□□□ -2.18
BRF1P29056 NUT1YGL151W 3399 nt1.45□□□□□ -2.18
BRF1P29056 PIP2YOR363C 2991 nt1.45□□□□□ -2.18
BRF1P29056 MUK1YPL070W 1839 nt1.45□□□□□ -2.18
BRF1P29056 AZF1YOR113W 2745 nt1.45□□□□□ -2.18
BRF1P29056 APL2YKL135C 2181 nt1.44□□□□□ -2.18
BRF1P29056 CDC36YDL165W 576 nt1.44□□□□□ -2.18
BRF1P29056 YMR141W-AYMR141W-A 225 nt1.44□□□□□ -2.18
BRF1P29056 YOR121CYOR121C 306 nt1.44□□□□□ -2.18
BRF1P29056 TRM732YMR259C 4263 nt1.44□□□□□ -2.18
BRF1P29056 YDR182W-AYDR182W-A 204 nt1.43□□□□□ -2.18
BRF1P29056 YER137W-AYER137W-A 306 nt1.43□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 57.9 ms