Protein–RNA interactions for Protein: P0CX63

TY2B-F, Transposon Ty2-F Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-FP0CX63 YDL009CYDL009C 324 nt-0.39□□□□□ -2.47
TY2B-FP0CX63 SLD5YDR489W 885 nt-0.39□□□□□ -2.47
TY2B-FP0CX63 HOT13YKL084W 351 nt-0.39□□□□□ -2.47
TY2B-FP0CX63 SWM2YNR004W 441 nt-0.39□□□□□ -2.47
TY2B-FP0CX63 YDL187CYDL187C 330 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YDR199WYDR199W 366 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YJL127W-AYJL127W-A 117 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YLR101CYLR101C 396 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YLR252WYLR252W 306 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YNL150WYNL150W 408 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 YPL080CYPL080C 327 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 AEP1YMR064W 1557 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 SPO11YHL022C 1197 nt-0.4□□□□□ -2.47
TY2B-FP0CX63 EFR3YMR212C 2349 nt-0.41□□□□□ -2.47
TY2B-FP0CX63 NPC2YDL046W 522 nt-0.41□□□□□ -2.47
TY2B-FP0CX63 snR8snR8 190 nt-0.41□□□□□ -2.47
TY2B-FP0CX63 YBR206WYBR206W 324 nt-0.41□□□□□ -2.47
TY2B-FP0CX63 YER046W-AYER046W-A 330 nt-0.42□□□□□ -2.48
TY2B-FP0CX63 YKL065W-AYKL065W-A 222 nt-0.42□□□□□ -2.48
TY2B-FP0CX63 YLR311CYLR311C 348 nt-0.42□□□□□ -2.48
TY2B-FP0CX63 RAD61YDR014W 1944 nt-0.42□□□□□ -2.48
TY2B-FP0CX63 CCE1YKL011C 1062 nt-0.42□□□□□ -2.48
TY2B-FP0CX63 REF2YDR195W 1602 nt-0.43□□□□□ -2.48
TY2B-FP0CX63 YGR042WYGR042W 816 nt-0.43□□□□□ -2.48
TY2B-FP0CX63 CRG1YHR209W 876 nt-0.43□□□□□ -2.48
TY2B-FP0CX63 YJR011CYJR011C 786 nt-0.43□□□□□ -2.48
TY2B-FP0CX63 RPM2YML091C 3609 nt-0.43□□□□□ -2.48
TY2B-FP0CX63 FYV10YIL097W 1551 nt-0.44□□□□□ -2.48
TY2B-FP0CX63 AI4Q0065 1671 nt-0.44□□□□□ -2.48
TY2B-FP0CX63 SEC10YLR166C 2616 nt-0.44□□□□□ -2.48
TY2B-FP0CX63 SPO23YBR250W 1572 nt-0.44□□□□□ -2.48
TY2B-FP0CX63 LCD1YDR499W 2244 nt-0.44□□□□□ -2.48
TY2B-FP0CX63 YDR029WYDR029W 315 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 RAD6YGL058W 519 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 TIM10YHR005C-A 282 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 RTC6YPL183W-A 282 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 YPL197CYPL197C 414 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 YJL114WYJL114W 681 nt-0.45□□□□□ -2.48
TY2B-FP0CX63 YDR114CYDR114C 303 nt-0.46□□□□□ -2.48
TY2B-FP0CX63 YKE2YLR200W 345 nt-0.46□□□□□ -2.48
TY2B-FP0CX63 YPR172WYPR172W 603 nt-0.46□□□□□ -2.48
TY2B-FP0CX63 YDR210WYDR210W 228 nt-0.47□□□□□ -2.48
TY2B-FP0CX63 YIR018C-AYIR018C-A 138 nt-0.47□□□□□ -2.48
TY2B-FP0CX63 YNL211CYNL211C 261 nt-0.47□□□□□ -2.48
TY2B-FP0CX63 ARP9YMR033W 1404 nt-0.47□□□□□ -2.48
TY2B-FP0CX63 RPL42BYHR141C 321 nt-0.47□□□□□ -2.49
TY2B-FP0CX63 RRT1YBL048W 312 nt-0.47□□□□□ -2.49
TY2B-FP0CX63 RPL42AYNL162W 321 nt-0.47□□□□□ -2.49
TY2B-FP0CX63 LEE1YPL054W 906 nt-0.47□□□□□ -2.49
TY2B-FP0CX63 YEL073CYEL073C 324 nt-0.48□□□□□ -2.49
TY2B-FP0CX63 GEP7YGL057C 864 nt-0.48□□□□□ -2.49
TY2B-FP0CX63 YHL048C-AYHL048C-A 135 nt-0.48□□□□□ -2.49
TY2B-FP0CX63 YHR139C-AYHR139C-A 312 nt-0.48□□□□□ -2.49
TY2B-FP0CX63 YIR030W-AYIR030W-A 384 nt-0.48□□□□□ -2.49
TY2B-FP0CX63 SOV1YMR066W 2697 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 BET4YJL031C 984 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 UPS1YLR193C 528 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 PHO80YOL001W 882 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 NME1NME1 340 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 SUT2YPR009W 807 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 YCL002CYCL002C 792 nt-0.49□□□□□ -2.49
TY2B-FP0CX63 HNT1YDL125C 477 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 KAR1YNL188W 1302 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 ZIP1YDR285W 2628 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 CUL3YGR003W 2235 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 AFB1YLR040C 675 nt-0.5□□□□□ -2.49
TY2B-FP0CX63 MIC19YFR011C 513 nt-0.51□□□□□ -2.49
TY2B-FP0CX63 YHL042WYHL042W 453 nt-0.51□□□□□ -2.49
TY2B-FP0CX63 ORC3YLL004W 1851 nt-0.51□□□□□ -2.49
TY2B-FP0CX63 SRP14YDL092W 441 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 GPG1YGL121C 381 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 YJL032WYJL032W 315 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 snR128snR128 126 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 PTP2YOR208W 2253 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 YDR194W-AYDR194W-A 153 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 MMS2YGL087C 414 nt-0.52□□□□□ -2.49
TY2B-FP0CX63 RTR2YDR066C 591 nt-0.53□□□□□ -2.49
TY2B-FP0CX63 YOP1YPR028W 543 nt-0.53□□□□□ -2.49
TY2B-FP0CX63 YBR184WYBR184W 1572 nt-0.53□□□□□ -2.5
TY2B-FP0CX63 BSC3YLR465C 309 nt-0.54□□□□□ -2.5
TY2B-FP0CX63 FAR3YMR052W 615 nt-0.54□□□□□ -2.5
TY2B-FP0CX63 RPS16AYMR143W 432 nt-0.54□□□□□ -2.5
TY2B-FP0CX63 YBR051WYBR051W 351 nt-0.54□□□□□ -2.5
TY2B-FP0CX63 PRP21YJL203W 843 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 YJR141WYJR141W 1044 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 OLI1Q0130 231 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 YGR204C-AYGR204C-A 114 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 HTB2YBL002W 396 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 CSM4YPL200W 471 nt-0.55□□□□□ -2.5
TY2B-FP0CX63 AI5_ALPHAQ0070 1893 nt-0.56□□□□□ -2.5
TY2B-FP0CX63 DAD1YDR016C 285 nt-0.56□□□□□ -2.5
TY2B-FP0CX63 YDR371C-AYDR371C-A 105 nt-0.56□□□□□ -2.5
TY2B-FP0CX63 ECM9YKR004C 1134 nt-0.56□□□□□ -2.5
TY2B-FP0CX63 MUM2YBR057C 1101 nt-0.56□□□□□ -2.5
TY2B-FP0CX63 RFX1YLR176C 2436 nt-0.57□□□□□ -2.5
TY2B-FP0CX63 YBR223W-AYBR223W-A 120 nt-0.57□□□□□ -2.5
TY2B-FP0CX63 YCR038W-AYCR038W-A 126 nt-0.57□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 167.4 ms