Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YOP1YPR028W 543 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 MSC6YOR354C 2079 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 LYS14YDR034C 2373 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 SEC63YOR254C 1992 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 RIM20YOR275C 1986 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 TOR2YKL203C 7425 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 TDA9YML081W 3756 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 STH1YIL126W 4080 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 YEL057CYEL057C 702 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 YHL037CYHL037C 402 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 RPL38YLR325C 237 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 SEY1YOR165W 2331 nt1.92□□□□□ -2.1
TY2A-LR1P0C2J4 MUK1YPL070W 1839 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 NOP14YDL148C 2433 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 RPL35AYDL191W 363 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 NHP2YDL208W 471 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 YDR003W-AYDR003W-A 123 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 YDR413CYDR413C 576 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 SEC31YDL195W 3822 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 MGA2YIR033W 3342 nt1.91□□□□□ -2.1
TY2A-LR1P0C2J4 NEO1YIL048W 3456 nt1.9□□□□□ -2.1
TY2A-LR1P0C2J4 ZIP1YDR285W 2628 nt1.9□□□□□ -2.1
TY2A-LR1P0C2J4 CFT2YLR115W 2580 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 HTB2YBL002W 396 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 snR36snR36 182 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 snR51snR51 107 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 FAB1YFR019W 6837 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 HMI1YOL095C 2121 nt1.9□□□□□ -2.11
TY2A-LR1P0C2J4 SPP41YDR464W 4308 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 ATG11YPR049C 3537 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 MSH5YDL154W 2706 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 MYO4YAL029C 4416 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 YDR169C-AYDR169C-A 150 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 YBL012CYBL012C 402 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 YML007C-AYML007C-A 111 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 RLM1YPL089C 2031 nt1.89□□□□□ -2.11
TY2A-LR1P0C2J4 FRK1YPL141C 2598 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 YDR183C-AYDR183C-A 258 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 YER097WYER097W 330 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 TAR1YLR154W-C 375 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 YMR141W-AYMR141W-A 225 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 HIR3YJR140C 4947 nt1.88□□□□□ -2.11
TY2A-LR1P0C2J4 YFL032WYFL032W 321 nt1.87□□□□□ -2.11
TY2A-LR1P0C2J4 MAM33YIL070C 801 nt1.87□□□□□ -2.11
TY2A-LR1P0C2J4 PCC1YKR095W-A 267 nt1.87□□□□□ -2.11
TY2A-LR1P0C2J4 AGC1YPR021C 2709 nt1.86□□□□□ -2.11
TY2A-LR1P0C2J4 YHR071C-AYHR071C-A 321 nt1.86□□□□□ -2.11
TY2A-LR1P0C2J4 RPL39YJL189W 156 nt1.86□□□□□ -2.11
TY2A-LR1P0C2J4 TRX1YLR043C 312 nt1.86□□□□□ -2.11
TY2A-LR1P0C2J4 YMR031W-AYMR031W-A 327 nt1.86□□□□□ -2.11
TY2A-LR1P0C2J4 YLL032CYLL032C 2478 nt1.85□□□□□ -2.11
TY2A-LR1P0C2J4 RPB10YOR210W 213 nt1.85□□□□□ -2.11
TY2A-LR1P0C2J4 INP2YMR163C 2118 nt1.85□□□□□ -2.11
TY2A-LR1P0C2J4 MLH3YPL164C 2148 nt1.85□□□□□ -2.11
TY2A-LR1P0C2J4 YDR426CYDR426C 378 nt1.84□□□□□ -2.11
TY2A-LR1P0C2J4 YPR002C-AYPR002C-A 198 nt1.84□□□□□ -2.11
TY2A-LR1P0C2J4 YCL023CYCL023C 348 nt1.84□□□□□ -2.11
TY2A-LR1P0C2J4 YJR039WYJR039W 3366 nt1.84□□□□□ -2.12
TY2A-LR1P0C2J4 MSH6YDR097C 3729 nt1.83□□□□□ -2.12
TY2A-LR1P0C2J4 MVP1YMR004W 1536 nt1.83□□□□□ -2.12
TY2A-LR1P0C2J4 NPC2YDL046W 522 nt1.83□□□□□ -2.12
TY2A-LR1P0C2J4 TMA7YLR262C-A 195 nt1.83□□□□□ -2.12
TY2A-LR1P0C2J4 YOR199WYOR199W 330 nt1.83□□□□□ -2.12
TY2A-LR1P0C2J4 PAU3YCR104W 375 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 SRP14YDL092W 441 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 MDM20YOL076W 2391 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 STE5YDR103W 2754 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 PEP1YBL017C 4740 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 HSH155YMR288W 2916 nt1.82□□□□□ -2.12
TY2A-LR1P0C2J4 SAS3YBL052C 2496 nt1.81□□□□□ -2.12
TY2A-LR1P0C2J4 YDR048CYDR048C 315 nt1.81□□□□□ -2.12
TY2A-LR1P0C2J4 YFL063WYFL063W 456 nt1.81□□□□□ -2.12
TY2A-LR1P0C2J4 DGR2YKL121W 2559 nt1.8□□□□□ -2.12
TY2A-LR1P0C2J4 ELG1YOR144C 2376 nt1.79□□□□□ -2.12
TY2A-LR1P0C2J4 YNL277W-AYNL277W-A 189 nt1.79□□□□□ -2.12
TY2A-LR1P0C2J4 UBR2YLR024C 5619 nt1.78□□□□□ -2.12
TY2A-LR1P0C2J4 YGL149WYGL149W 306 nt1.78□□□□□ -2.12
TY2A-LR1P0C2J4 YLR255CYLR255C 354 nt1.78□□□□□ -2.12
TY2A-LR1P0C2J4 UTP21YLR409C 2820 nt1.78□□□□□ -2.12
TY2A-LR1P0C2J4 LHS1YKL073W 2646 nt1.78□□□□□ -2.12
TY2A-LR1P0C2J4 YHR214C-BYHR214C-B 5382 nt1.78□□□□□ -2.13
TY2A-LR1P0C2J4 YMR045CYMR045C 5268 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 SFB2YNL049C 2631 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 ENV11YGR071C 2583 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 HTL1YCR020W-B 237 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 snR72snR72 98 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 YJL135WYJL135W 318 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 YAR029WYAR029W 225 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 YMR193C-AYMR193C-A 387 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 YOL160WYOL160W 342 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 GCN2YDR283C 4980 nt1.77□□□□□ -2.13
TY2A-LR1P0C2J4 PIG1YLR273C 1947 nt1.76□□□□□ -2.13
TY2A-LR1P0C2J4 YMR242W-AYMR242W-A 90 nt1.76□□□□□ -2.13
TY2A-LR1P0C2J4 YOR108C-AYOR108C-A 210 nt1.76□□□□□ -2.13
TY2A-LR1P0C2J4 APL2YKL135C 2181 nt1.76□□□□□ -2.13
TY2A-LR1P0C2J4 YNL144CYNL144C 2223 nt1.75□□□□□ -2.13
TY2A-LR1P0C2J4 ZIP2YGL249W 2115 nt1.75□□□□□ -2.13
TY2A-LR1P0C2J4 snR65snR65 100 nt1.75□□□□□ -2.13
TY2A-LR1P0C2J4 TBS1YBR150C 3285 nt1.74□□□□□ -2.13
TY2A-LR1P0C2J4 YIL102CYIL102C 306 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms