Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Gm34391-201ENSMUST00000203706 907 ntBASIC20.23■□□□□ 0.83
Foxd1Q61345 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Foxd1Q61345 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd1Q61345 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Gm37292-201ENSMUST00000192062 758 ntBASIC20.22■□□□□ 0.83
Foxd1Q61345 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.22■□□□□ 0.83
Foxd1Q61345 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Gm8587-201ENSMUST00000076538 843 ntBASIC20.22■□□□□ 0.83
Foxd1Q61345 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxd1Q61345 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Foxd1Q61345 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Foxd1Q61345 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Foxd1Q61345 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Foxd1Q61345 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Foxd1Q61345 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.21■□□□□ 0.83
Foxd1Q61345 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Foxd1Q61345 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd1Q61345 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Foxd1Q61345 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Foxd1Q61345 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Foxd1Q61345 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.2■□□□□ 0.82
Foxd1Q61345 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxd1Q61345 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Foxd1Q61345 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd1Q61345 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd1Q61345 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd1Q61345 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd1Q61345 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Foxd1Q61345 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd1Q61345 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxd1Q61345 Gm21559-201ENSMUST00000220638 855 ntBASIC20.19■□□□□ 0.82
Foxd1Q61345 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Foxd1Q61345 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxd1Q61345 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Foxd1Q61345 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.18■□□□□ 0.82
Foxd1Q61345 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.18■□□□□ 0.82
Foxd1Q61345 Gm2756-201ENSMUST00000195851 400 ntBASIC20.18■□□□□ 0.82
Foxd1Q61345 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxd1Q61345 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd1Q61345 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms