Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YJL015CYJL015C 285 nt1.13□□□□□ -2.23
RRP40Q08285 PAU18YLL064C 363 nt1.13□□□□□ -2.23
RRP40Q08285 PAU6YNR076W 363 nt1.13□□□□□ -2.23
RRP40Q08285 IRC16YPR038W 360 nt1.13□□□□□ -2.23
RRP40Q08285 MVP1YMR004W 1536 nt1.13□□□□□ -2.23
RRP40Q08285 MLH3YPL164C 2148 nt1.13□□□□□ -2.23
RRP40Q08285 MSS11YMR164C 2277 nt1.12□□□□□ -2.23
RRP40Q08285 QCR7YDR529C 384 nt1.12□□□□□ -2.23
RRP40Q08285 PRM8YGL053W 714 nt1.12□□□□□ -2.23
RRP40Q08285 YGR283CYGR283C 1026 nt1.12□□□□□ -2.23
RRP40Q08285 YKL123WYKL123W 381 nt1.12□□□□□ -2.23
RRP40Q08285 FCF2YLR051C 654 nt1.12□□□□□ -2.23
RRP40Q08285 BER1YLR412W 825 nt1.12□□□□□ -2.23
RRP40Q08285 CTK3YML112W 891 nt1.12□□□□□ -2.23
RRP40Q08285 UFD2YDL190C 2886 nt1.11□□□□□ -2.23
RRP40Q08285 RPL40BYKR094C 387 nt1.11□□□□□ -2.23
RRP40Q08285 RRT15YLR162W-A 189 nt1.11□□□□□ -2.23
RRP40Q08285 RPS18BYML026C 441 nt1.11□□□□□ -2.23
RRP40Q08285 DDR48YMR173W 1293 nt1.11□□□□□ -2.23
RRP40Q08285 YOR248WYOR248W 303 nt1.11□□□□□ -2.23
RRP40Q08285 YSY6YBR162W-A 198 nt1.11□□□□□ -2.23
RRP40Q08285 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
RRP40Q08285 PPN1YDR452W 2025 nt1.11□□□□□ -2.23
RRP40Q08285 IML1YJR138W 4755 nt1.11□□□□□ -2.23
RRP40Q08285 NST1YNL091W 3723 nt1.1□□□□□ -2.23
RRP40Q08285 YDL016CYDL016C 303 nt1.1□□□□□ -2.23
RRP40Q08285 YJR141WYJR141W 1044 nt1.1□□□□□ -2.23
RRP40Q08285 YML003WYML003W 873 nt1.1□□□□□ -2.23
RRP40Q08285 GAL7YBR018C 1101 nt1.1□□□□□ -2.23
RRP40Q08285 YPR099CYPR099C 357 nt1.1□□□□□ -2.23
RRP40Q08285 TTI1YKL033W 3117 nt1.1□□□□□ -2.23
RRP40Q08285 HDA3YPR179C 1968 nt1.1□□□□□ -2.23
RRP40Q08285 ZRG17YNR039C 1818 nt1.1□□□□□ -2.23
RRP40Q08285 YDR169C-AYDR169C-A 150 nt1.09□□□□□ -2.23
RRP40Q08285 RTT102YGR275W 474 nt1.09□□□□□ -2.23
RRP40Q08285 UBX4YMR067C 1251 nt1.09□□□□□ -2.23
RRP40Q08285 YOR376WYOR376W 369 nt1.09□□□□□ -2.23
RRP40Q08285 SVS1YPL163C 783 nt1.09□□□□□ -2.23
RRP40Q08285 YBR121C-AYBR121C-A 159 nt1.09□□□□□ -2.23
RRP40Q08285 SIP4YJL089W 2490 nt1.09□□□□□ -2.24
RRP40Q08285 AZF1YOR113W 2745 nt1.09□□□□□ -2.24
RRP40Q08285 SHE9YDR393W 1371 nt1.08□□□□□ -2.24
RRP40Q08285 YCS4YLR272C 3531 nt1.08□□□□□ -2.24
RRP40Q08285 YHL009W-AYHL009W-A 1242 nt1.08□□□□□ -2.24
RRP40Q08285 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
RRP40Q08285 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
RRP40Q08285 NOP15YNL110C 663 nt1.08□□□□□ -2.24
RRP40Q08285 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
RRP40Q08285 PAN3YKL025C 2040 nt1.07□□□□□ -2.24
RRP40Q08285 YPR039WYPR039W 336 nt1.07□□□□□ -2.24
RRP40Q08285 NUP188YML103C 4968 nt1.07□□□□□ -2.24
RRP40Q08285 SNU56YDR240C 1479 nt1.06□□□□□ -2.24
RRP40Q08285 APL1YJR005W 2103 nt1.06□□□□□ -2.24
RRP40Q08285 YDL211CYDL211C 1119 nt1.06□□□□□ -2.24
RRP40Q08285 YDR003W-AYDR003W-A 123 nt1.06□□□□□ -2.24
RRP40Q08285 YDR509WYDR509W 348 nt1.06□□□□□ -2.24
RRP40Q08285 YKL068W-AYKL068W-A 237 nt1.06□□□□□ -2.24
RRP40Q08285 TIM18YOR297C 579 nt1.06□□□□□ -2.24
RRP40Q08285 YOR192C-AYOR192C-A 1317 nt1.06□□□□□ -2.24
RRP40Q08285 SWI5YDR146C 2130 nt1.06□□□□□ -2.24
RRP40Q08285 YBR032WYBR032W 303 nt1.05□□□□□ -2.24
RRP40Q08285 YPR063CYPR063C 423 nt1.05□□□□□ -2.24
RRP40Q08285 SLX4YLR135W 2247 nt1.05□□□□□ -2.24
RRP40Q08285 UBP3YER151C 2739 nt1.05□□□□□ -2.24
RRP40Q08285 SGO1YOR073W 1773 nt1.04□□□□□ -2.24
RRP40Q08285 YDR008CYDR008C 351 nt1.04□□□□□ -2.24
RRP40Q08285 YDR029WYDR029W 315 nt1.04□□□□□ -2.24
RRP40Q08285 MET32YDR253C 576 nt1.04□□□□□ -2.24
RRP40Q08285 YGL217CYGL217C 342 nt1.04□□□□□ -2.24
RRP40Q08285 RPL34BYIL052C 366 nt1.04□□□□□ -2.24
RRP40Q08285 YOP1YPR028W 543 nt1.04□□□□□ -2.24
RRP40Q08285 MDS3YGL197W 4464 nt1.04□□□□□ -2.24
RRP40Q08285 RAD50YNL250W 3939 nt1.04□□□□□ -2.24
RRP40Q08285 SPR3YGR059W 1539 nt1.04□□□□□ -2.24
RRP40Q08285 PAU2YEL049W 363 nt1.03□□□□□ -2.24
RRP40Q08285 YOR161W-BYOR161W-B 261 nt1.03□□□□□ -2.24
RRP40Q08285 SEC5YDR166C 2916 nt1.03□□□□□ -2.24
RRP40Q08285 VPS54YDR027C 2670 nt1.02□□□□□ -2.25
RRP40Q08285 SRP14YDL092W 441 nt1.02□□□□□ -2.25
RRP40Q08285 TMA22YJR014W 597 nt1.02□□□□□ -2.25
RRP40Q08285 ILM1YJR118C 612 nt1.02□□□□□ -2.25
RRP40Q08285 TOF2YKR010C 2316 nt1.02□□□□□ -2.25
RRP40Q08285 GDS1YOR355W 1569 nt1.02□□□□□ -2.25
RRP40Q08285 MUK1YPL070W 1839 nt1.02□□□□□ -2.25
RRP40Q08285 NUT1YGL151W 3399 nt1.01□□□□□ -2.25
RRP40Q08285 YAP3YHL009C 993 nt1.01□□□□□ -2.25
RRP40Q08285 HCH1YNL281W 462 nt1.01□□□□□ -2.25
RRP40Q08285 snR13snR13 124 nt1.01□□□□□ -2.25
RRP40Q08285 RCN2YOR220W 798 nt1.01□□□□□ -2.25
RRP40Q08285 YBR071WYBR071W 636 nt1.01□□□□□ -2.25
RRP40Q08285 snR84snR84 550 nt1□□□□□ -2.25
RRP40Q08285 HUR1YGL168W 333 nt1□□□□□ -2.25
RRP40Q08285 RPL9BYNL067W 576 nt1□□□□□ -2.25
RRP40Q08285 YPR117WYPR117W 7470 nt1□□□□□ -2.25
RRP40Q08285 ZIP1YDR285W 2628 nt1□□□□□ -2.25
RRP40Q08285 SPO23YBR250W 1572 nt1□□□□□ -2.25
RRP40Q08285 MKT1YNL085W 2493 nt0.99□□□□□ -2.25
RRP40Q08285 SWI4YER111C 3282 nt0.99□□□□□ -2.25
RRP40Q08285 YER135CYER135C 393 nt0.98□□□□□ -2.25
RRP40Q08285 RTR1YER139C 681 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 71.6 ms