Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 CYC7YEL039C 342 nt0.57□□□□□ -2.32
RFU1Q08003 LOC1YFR001W 615 nt0.57□□□□□ -2.32
RFU1Q08003 NBP1YLR457C 960 nt0.57□□□□□ -2.32
RFU1Q08003 YOR029WYOR029W 336 nt0.57□□□□□ -2.32
RFU1Q08003 SWT1YOR166C 1377 nt0.57□□□□□ -2.32
RFU1Q08003 TOF2YKR010C 2316 nt0.56□□□□□ -2.32
RFU1Q08003 YDR115WYDR115W 318 nt0.56□□□□□ -2.32
RFU1Q08003 YHR050W-AYHR050W-A 171 nt0.56□□□□□ -2.32
RFU1Q08003 CMS1YLR003C 876 nt0.56□□□□□ -2.32
RFU1Q08003 COX3Q0275 810 nt0.55□□□□□ -2.32
RFU1Q08003 RPL37AYLR185W 267 nt0.55□□□□□ -2.32
RFU1Q08003 YLR412C-AYLR412C-A 207 nt0.55□□□□□ -2.32
RFU1Q08003 YMR160WYMR160W 2451 nt0.54□□□□□ -2.32
RFU1Q08003 NUT1YGL151W 3399 nt0.54□□□□□ -2.32
RFU1Q08003 YER023C-AYER023C-A 213 nt0.54□□□□□ -2.32
RFU1Q08003 POL32YJR043C 1053 nt0.54□□□□□ -2.32
RFU1Q08003 HUG1YML058W-A 207 nt0.54□□□□□ -2.32
RFU1Q08003 YBR012CYBR012C 420 nt0.54□□□□□ -2.32
RFU1Q08003 MPT5YGL178W 2580 nt0.54□□□□□ -2.32
RFU1Q08003 RIM20YOR275C 1986 nt0.54□□□□□ -2.32
RFU1Q08003 HDA3YPR179C 1968 nt0.54□□□□□ -2.32
RFU1Q08003 TDA2YER071C 381 nt0.53□□□□□ -2.32
RFU1Q08003 YOR364WYOR364W 369 nt0.53□□□□□ -2.32
RFU1Q08003 ATP20YPR020W 348 nt0.53□□□□□ -2.32
RFU1Q08003 NOC3YLR002C 1992 nt0.53□□□□□ -2.32
RFU1Q08003 YML002WYML002W 2214 nt0.53□□□□□ -2.33
RFU1Q08003 TFB6YOR352W 1032 nt0.52□□□□□ -2.33
RFU1Q08003 YBR221W-AYBR221W-A 105 nt0.52□□□□□ -2.33
RFU1Q08003 OST1YJL002C 1431 nt0.52□□□□□ -2.33
RFU1Q08003 UTP20YBL004W 7482 nt0.51□□□□□ -2.33
RFU1Q08003 ZIP1YDR285W 2628 nt0.51□□□□□ -2.33
RFU1Q08003 YGR045CYGR045C 363 nt0.51□□□□□ -2.33
RFU1Q08003 ACF4YJR083C 930 nt0.51□□□□□ -2.33
RFU1Q08003 YOR072W-AYOR072W-A 249 nt0.51□□□□□ -2.33
RFU1Q08003 RPS30BYOR182C 192 nt0.51□□□□□ -2.33
RFU1Q08003 YBR200W-AYBR200W-A 165 nt0.51□□□□□ -2.33
RFU1Q08003 AIM44YPL158C 2277 nt0.5□□□□□ -2.33
RFU1Q08003 MXR1YER042W 555 nt0.5□□□□□ -2.33
RFU1Q08003 YGL109WYGL109W 324 nt0.5□□□□□ -2.33
RFU1Q08003 CUP1-1YHR053C 186 nt0.5□□□□□ -2.33
RFU1Q08003 CUP1-2YHR055C 186 nt0.5□□□□□ -2.33
RFU1Q08003 INA22YIR024C 651 nt0.5□□□□□ -2.33
RFU1Q08003 YDL206WYDL206W 2289 nt0.5□□□□□ -2.33
RFU1Q08003 SET3YKR029C 2256 nt0.49□□□□□ -2.33
RFU1Q08003 YLL007CYLL007C 1998 nt0.49□□□□□ -2.33
RFU1Q08003 VPS52YDR484W 1926 nt0.49□□□□□ -2.33
RFU1Q08003 SRP14YDL092W 441 nt0.49□□□□□ -2.33
RFU1Q08003 BUD26YDR241W 288 nt0.49□□□□□ -2.33
RFU1Q08003 SMB1YER029C 591 nt0.49□□□□□ -2.33
RFU1Q08003 RPL38YLR325C 237 nt0.49□□□□□ -2.33
RFU1Q08003 YOP1YPR028W 543 nt0.49□□□□□ -2.33
RFU1Q08003 YDR003W-AYDR003W-A 123 nt0.48□□□□□ -2.33
RFU1Q08003 SWI5YDR146C 2130 nt0.48□□□□□ -2.33
RFU1Q08003 URM1YIL008W 300 nt0.48□□□□□ -2.33
RFU1Q08003 YBL068W-AYBL068W-A 237 nt0.48□□□□□ -2.33
RFU1Q08003 YOL106WYOL106W 354 nt0.48□□□□□ -2.33
RFU1Q08003 NUT2YPR168W 474 nt0.48□□□□□ -2.33
RFU1Q08003 RRI2YOL117W 1938 nt0.48□□□□□ -2.33
RFU1Q08003 YDL073WYDL073W 2955 nt0.47□□□□□ -2.33
RFU1Q08003 SAG1YJR004C 1953 nt0.47□□□□□ -2.33
RFU1Q08003 snR79snR79 84 nt0.47□□□□□ -2.33
RFU1Q08003 YDL196WYDL196W 330 nt0.47□□□□□ -2.33
RFU1Q08003 YER087C-AYER087C-A 552 nt0.47□□□□□ -2.33
RFU1Q08003 YHR028W-AYHR028W-A 321 nt0.47□□□□□ -2.33
RFU1Q08003 PAC1YOR269W 1485 nt0.47□□□□□ -2.33
RFU1Q08003 PIG1YLR273C 1947 nt0.46□□□□□ -2.34
RFU1Q08003 YJR003CYJR003C 1560 nt0.46□□□□□ -2.34
RFU1Q08003 COX7YMR256C 183 nt0.46□□□□□ -2.34
RFU1Q08003 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
RFU1Q08003 SWI6YLR182W 2412 nt0.45□□□□□ -2.34
RFU1Q08003 STO1YMR125W 2586 nt0.45□□□□□ -2.34
RFU1Q08003 YDL152WYDL152W 366 nt0.45□□□□□ -2.34
RFU1Q08003 SWF1YDR126W 1011 nt0.45□□□□□ -2.34
RFU1Q08003 tT(UGU)Q1tT(UGU)Q1 76 nt0.45□□□□□ -2.34
RFU1Q08003 BMT5YIL096C 1011 nt0.45□□□□□ -2.34
RFU1Q08003 YJR140W-AYJR140W-A 150 nt0.45□□□□□ -2.34
RFU1Q08003 CMC1YKL137W 336 nt0.45□□□□□ -2.34
RFU1Q08003 YMR304C-AYMR304C-A 351 nt0.45□□□□□ -2.34
RFU1Q08003 RUF22RUF22 515 nt0.45□□□□□ -2.34
RFU1Q08003 YNL150WYNL150W 408 nt0.45□□□□□ -2.34
RFU1Q08003 YOR199WYOR199W 330 nt0.45□□□□□ -2.34
RFU1Q08003 FIG4YNL325C 2640 nt0.45□□□□□ -2.34
RFU1Q08003 PRP16YKR086W 3216 nt0.45□□□□□ -2.34
RFU1Q08003 PXA2YKL188C 2562 nt0.44□□□□□ -2.34
RFU1Q08003 HNT1YDL125C 477 nt0.44□□□□□ -2.34
RFU1Q08003 YER158W-AYER158W-A 216 nt0.44□□□□□ -2.34
RFU1Q08003 LIN1YHR156C 1023 nt0.44□□□□□ -2.34
RFU1Q08003 SCW11YGL028C 1629 nt0.43□□□□□ -2.34
RFU1Q08003 AI5_ALPHAQ0070 1893 nt0.43□□□□□ -2.34
RFU1Q08003 PDE2YOR360C 1581 nt0.42□□□□□ -2.34
RFU1Q08003 YDR509WYDR509W 348 nt0.42□□□□□ -2.34
RFU1Q08003 YBL062WYBL062W 381 nt0.42□□□□□ -2.34
RFU1Q08003 IES4YOR189W 351 nt0.42□□□□□ -2.34
RFU1Q08003 SLM6YBR266C 453 nt0.42□□□□□ -2.34
RFU1Q08003 ULP2YIL031W 3105 nt0.42□□□□□ -2.34
RFU1Q08003 YHR054CYHR054C 1065 nt0.41□□□□□ -2.34
RFU1Q08003 HIT1YJR055W 495 nt0.41□□□□□ -2.34
RFU1Q08003 YKL111CYKL111C 336 nt0.41□□□□□ -2.34
RFU1Q08003 YLR217WYLR217W 324 nt0.41□□□□□ -2.34
RFU1Q08003 YBR032WYBR032W 303 nt0.41□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms