Protein–RNA interactions for Protein: Q07887

LDB18, Protein LDB18, yeastyeast

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB18Q07887 RMD6YEL072W 696 nt0.43□□□□□ -2.34
LDB18Q07887 CHZ1YER030W 462 nt0.43□□□□□ -2.34
LDB18Q07887 MXR1YER042W 555 nt0.43□□□□□ -2.34
LDB18Q07887 YGR265WYGR265W 411 nt0.43□□□□□ -2.34
LDB18Q07887 YBR221W-AYBR221W-A 105 nt0.43□□□□□ -2.34
LDB18Q07887 RIM20YOR275C 1986 nt0.43□□□□□ -2.34
LDB18Q07887 SGD1YLR336C 2700 nt0.43□□□□□ -2.34
LDB18Q07887 YDR034C-CYDR034C-C 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YFL002W-BYFL002W-B 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YGR161W-AYGR161W-A 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YLR410W-AYLR410W-A 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YBL100W-AYBL100W-A 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YOR192C-AYOR192C-A 1317 nt0.42□□□□□ -2.34
LDB18Q07887 YCL020WYCL020W 1317 nt0.42□□□□□ -2.34
LDB18Q07887 KAR3YPR141C 2190 nt0.42□□□□□ -2.34
LDB18Q07887 NUP82YJL061W 2142 nt0.42□□□□□ -2.34
LDB18Q07887 UFE1YOR075W 1041 nt0.42□□□□□ -2.34
LDB18Q07887 GEA2YEL022W 4380 nt0.42□□□□□ -2.34
LDB18Q07887 RPL29YFR032C-A 180 nt0.41□□□□□ -2.34
LDB18Q07887 TIM8YJR135W-A 264 nt0.41□□□□□ -2.34
LDB18Q07887 SMD3YLR147C 306 nt0.41□□□□□ -2.34
LDB18Q07887 15S_rRNA15S_rRNA 1649 nt0.41□□□□□ -2.34
LDB18Q07887 LTE1YAL024C 4308 nt0.4□□□□□ -2.35
LDB18Q07887 REF2YDR195W 1602 nt0.4□□□□□ -2.35
LDB18Q07887 YDL196WYDL196W 330 nt0.4□□□□□ -2.35
LDB18Q07887 YJL086CYJL086C 369 nt0.4□□□□□ -2.35
LDB18Q07887 YBR032WYBR032W 303 nt0.4□□□□□ -2.35
LDB18Q07887 FIG4YNL325C 2640 nt0.4□□□□□ -2.35
LDB18Q07887 RSM18YER050C 417 nt0.39□□□□□ -2.35
LDB18Q07887 YIL030W-AYIL030W-A 339 nt0.39□□□□□ -2.35
LDB18Q07887 BMT5YIL096C 1011 nt0.39□□□□□ -2.35
LDB18Q07887 YMR075C-AYMR075C-A 366 nt0.39□□□□□ -2.35
LDB18Q07887 AI1Q0050 2505 nt0.39□□□□□ -2.35
LDB18Q07887 TRS65YGR166W 1683 nt0.39□□□□□ -2.35
LDB18Q07887 LYS14YDR034C 2373 nt0.39□□□□□ -2.35
LDB18Q07887 MPT5YGL178W 2580 nt0.38□□□□□ -2.35
LDB18Q07887 YDL206WYDL206W 2289 nt0.38□□□□□ -2.35
LDB18Q07887 GPX1YKL026C 504 nt0.38□□□□□ -2.35
LDB18Q07887 UBX4YMR067C 1251 nt0.38□□□□□ -2.35
LDB18Q07887 YBR184WYBR184W 1572 nt0.37□□□□□ -2.35
LDB18Q07887 YGL109WYGL109W 324 nt0.37□□□□□ -2.35
LDB18Q07887 YIL059CYIL059C 366 nt0.37□□□□□ -2.35
LDB18Q07887 SUS1YBR111W-A 291 nt0.37□□□□□ -2.35
LDB18Q07887 YBL073WYBL073W 312 nt0.36□□□□□ -2.35
LDB18Q07887 YBR012CYBR012C 420 nt0.36□□□□□ -2.35
LDB18Q07887 STO1YMR125W 2586 nt0.35□□□□□ -2.35
LDB18Q07887 YDL068WYDL068W 330 nt0.35□□□□□ -2.35
LDB18Q07887 YDR003W-AYDR003W-A 123 nt0.35□□□□□ -2.35
LDB18Q07887 RPL22BYFL034C-A 369 nt0.35□□□□□ -2.35
LDB18Q07887 VPS63YLR261C 327 nt0.35□□□□□ -2.35
LDB18Q07887 RPS30AYLR287C-A 192 nt0.35□□□□□ -2.35
LDB18Q07887 TYE7YOR344C 876 nt0.35□□□□□ -2.35
LDB18Q07887 NUT2YPR168W 474 nt0.35□□□□□ -2.35
LDB18Q07887 YBR200W-AYBR200W-A 165 nt0.35□□□□□ -2.35
LDB18Q07887 SLD3YGL113W 2007 nt0.34□□□□□ -2.36
LDB18Q07887 ECM12YHR021W-A 456 nt0.34□□□□□ -2.36
LDB18Q07887 YMR158C-AYMR158C-A 138 nt0.34□□□□□ -2.36
LDB18Q07887 RUF22RUF22 515 nt0.34□□□□□ -2.36
LDB18Q07887 NUT1YGL151W 3399 nt0.34□□□□□ -2.36
LDB18Q07887 NOC3YLR002C 1992 nt0.34□□□□□ -2.36
LDB18Q07887 YGR045CYGR045C 363 nt0.33□□□□□ -2.36
LDB18Q07887 IES4YOR189W 351 nt0.33□□□□□ -2.36
LDB18Q07887 YOP1YPR028W 543 nt0.33□□□□□ -2.36
LDB18Q07887 YPR172WYPR172W 603 nt0.33□□□□□ -2.36
LDB18Q07887 HDA3YPR179C 1968 nt0.33□□□□□ -2.36
LDB18Q07887 PIG1YLR273C 1947 nt0.32□□□□□ -2.36
LDB18Q07887 YER038W-AYER038W-A 381 nt0.32□□□□□ -2.36
LDB18Q07887 IES5YER092W 378 nt0.32□□□□□ -2.36
LDB18Q07887 SDH2YLL041C 801 nt0.32□□□□□ -2.36
LDB18Q07887 NBP1YLR457C 960 nt0.32□□□□□ -2.36
LDB18Q07887 YOR199WYOR199W 330 nt0.32□□□□□ -2.36
LDB18Q07887 AI5_ALPHAQ0070 1893 nt0.32□□□□□ -2.36
LDB18Q07887 YHR028W-AYHR028W-A 321 nt0.31□□□□□ -2.36
LDB18Q07887 DFG10YIL049W 762 nt0.31□□□□□ -2.36
LDB18Q07887 ARV1YLR242C 966 nt0.31□□□□□ -2.36
LDB18Q07887 UBC7YMR022W 498 nt0.31□□□□□ -2.36
LDB18Q07887 ATP20YPR020W 348 nt0.31□□□□□ -2.36
LDB18Q07887 snR59snR59 78 nt0.3□□□□□ -2.36
LDB18Q07887 HNT1YDL125C 477 nt0.3□□□□□ -2.36
LDB18Q07887 OCA6YDR067C 675 nt0.3□□□□□ -2.36
LDB18Q07887 ZIP1YDR285W 2628 nt0.3□□□□□ -2.36
LDB18Q07887 PAN2YGL094C 3348 nt0.3□□□□□ -2.36
LDB18Q07887 SWI5YDR146C 2130 nt0.29□□□□□ -2.36
LDB18Q07887 SCW11YGL028C 1629 nt0.29□□□□□ -2.36
LDB18Q07887 IQG1YPL242C 4488 nt0.29□□□□□ -2.36
LDB18Q07887 PXA2YKL188C 2562 nt0.29□□□□□ -2.36
LDB18Q07887 MKT1YNL085W 2493 nt0.28□□□□□ -2.36
LDB18Q07887 AIM44YPL158C 2277 nt0.28□□□□□ -2.36
LDB18Q07887 YDR509WYDR509W 348 nt0.28□□□□□ -2.36
LDB18Q07887 ALG13YGL047W 609 nt0.28□□□□□ -2.36
LDB18Q07887 GIM5YML094W 492 nt0.28□□□□□ -2.36
LDB18Q07887 COX7YMR256C 183 nt0.28□□□□□ -2.36
LDB18Q07887 SLM6YBR266C 453 nt0.28□□□□□ -2.36
LDB18Q07887 VPS52YDR484W 1926 nt0.28□□□□□ -2.36
LDB18Q07887 SAG1YJR004C 1953 nt0.28□□□□□ -2.36
LDB18Q07887 IRC2YDR112W 309 nt0.27□□□□□ -2.37
LDB18Q07887 YHR050W-AYHR050W-A 171 nt0.27□□□□□ -2.37
LDB18Q07887 YBL068W-AYBL068W-A 237 nt0.27□□□□□ -2.37
LDB18Q07887 KAR1YNL188W 1302 nt0.27□□□□□ -2.37
LDB18Q07887 NUP120YKL057C 3114 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 46.1 ms