Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 STB4YMR019W 2850 nt2.33□□□□□ -2.04
BRE1Q07457 CFT2YLR115W 2580 nt2.33□□□□□ -2.04
BRE1Q07457 SEF1YBL066C 3447 nt2.33□□□□□ -2.04
BRE1Q07457 PAN3YKL025C 2040 nt2.32□□□□□ -2.04
BRE1Q07457 YGR035CYGR035C 351 nt2.32□□□□□ -2.04
BRE1Q07457 YBL083CYBL083C 426 nt2.32□□□□□ -2.04
BRE1Q07457 UBP2YOR124C 3819 nt2.32□□□□□ -2.04
BRE1Q07457 YCR087C-AYCR087C-A 462 nt2.31□□□□□ -2.04
BRE1Q07457 TIM13YGR181W 318 nt2.31□□□□□ -2.04
BRE1Q07457 HSK3YKL138C-A 210 nt2.31□□□□□ -2.04
BRE1Q07457 YNL058CYNL058C 951 nt2.31□□□□□ -2.04
BRE1Q07457 PGA1YNL158W 597 nt2.31□□□□□ -2.04
BRE1Q07457 YOR394C-AYOR394C-A 168 nt2.31□□□□□ -2.04
BRE1Q07457 RPH1YER169W 2391 nt2.31□□□□□ -2.04
BRE1Q07457 YJR003CYJR003C 1560 nt2.31□□□□□ -2.04
BRE1Q07457 MCD1YDL003W 1701 nt2.31□□□□□ -2.04
BRE1Q07457 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
BRE1Q07457 YCR102W-AYCR102W-A 198 nt2.3□□□□□ -2.04
BRE1Q07457 YGR174W-AYGR174W-A 87 nt2.3□□□□□ -2.04
BRE1Q07457 YBL012CYBL012C 402 nt2.3□□□□□ -2.04
BRE1Q07457 AIM9YER080W 1884 nt2.29□□□□□ -2.04
BRE1Q07457 YDL152WYDL152W 366 nt2.29□□□□□ -2.04
BRE1Q07457 RTR1YER139C 681 nt2.29□□□□□ -2.04
BRE1Q07457 YKL083WYKL083W 615 nt2.29□□□□□ -2.04
BRE1Q07457 DIS3YOL021C 3006 nt2.28□□□□□ -2.04
BRE1Q07457 YDL062WYDL062W 426 nt2.28□□□□□ -2.04
BRE1Q07457 YAP6YDR259C 1152 nt2.28□□□□□ -2.04
BRE1Q07457 WIP1YDR374W-A 270 nt2.28□□□□□ -2.04
BRE1Q07457 RPL27BYDR471W 411 nt2.28□□□□□ -2.04
BRE1Q07457 YJL020W-AYJL020W-A 258 nt2.28□□□□□ -2.04
BRE1Q07457 MYO2YOR326W 4725 nt2.27□□□□□ -2.05
BRE1Q07457 DFG16YOR030W 1860 nt2.27□□□□□ -2.05
BRE1Q07457 HSH155YMR288W 2916 nt2.27□□□□□ -2.05
BRE1Q07457 RPL42BYHR141C 321 nt2.27□□□□□ -2.05
BRE1Q07457 RPL26AYLR344W 384 nt2.27□□□□□ -2.05
BRE1Q07457 RPL42AYNL162W 321 nt2.27□□□□□ -2.05
BRE1Q07457 YPL229WYPL229W 621 nt2.27□□□□□ -2.05
BRE1Q07457 NUP120YKL057C 3114 nt2.26□□□□□ -2.05
BRE1Q07457 YKL183C-AYKL183C-A 213 nt2.26□□□□□ -2.05
BRE1Q07457 ISF1YMR081C 1017 nt2.26□□□□□ -2.05
BRE1Q07457 MYO4YAL029C 4416 nt2.26□□□□□ -2.05
BRE1Q07457 PEP1YBL017C 4740 nt2.26□□□□□ -2.05
BRE1Q07457 CHC1YGL206C 4962 nt2.25□□□□□ -2.05
BRE1Q07457 YDL118WYDL118W 381 nt2.25□□□□□ -2.05
BRE1Q07457 HCH1YNL281W 462 nt2.25□□□□□ -2.05
BRE1Q07457 BIL1YOR304C-A 231 nt2.25□□□□□ -2.05
BRE1Q07457 PEX8YGR077C 1770 nt2.25□□□□□ -2.05
BRE1Q07457 YCR043CYCR043C 384 nt2.24□□□□□ -2.05
BRE1Q07457 YHR071C-AYHR071C-A 321 nt2.24□□□□□ -2.05
BRE1Q07457 YAR053WYAR053W 297 nt2.24□□□□□ -2.05
BRE1Q07457 YLR255CYLR255C 354 nt2.24□□□□□ -2.05
BRE1Q07457 PHS1YJL097W 654 nt2.23□□□□□ -2.05
BRE1Q07457 CYB5YNL111C 363 nt2.23□□□□□ -2.05
BRE1Q07457 IRC23YOR044W 474 nt2.23□□□□□ -2.05
BRE1Q07457 YPL038W-AYPL038W-A 192 nt2.23□□□□□ -2.05
BRE1Q07457 TFC8YPL007C 1767 nt2.23□□□□□ -2.05
BRE1Q07457 RPS20YHL015W 366 nt2.22□□□□□ -2.05
BRE1Q07457 YML003WYML003W 873 nt2.22□□□□□ -2.05
BRE1Q07457 DNF3YMR162C 4971 nt2.22□□□□□ -2.05
BRE1Q07457 PAU3YCR104W 375 nt2.21□□□□□ -2.06
BRE1Q07457 CGI121YML036W 546 nt2.21□□□□□ -2.06
BRE1Q07457 RPL32YBL092W 393 nt2.21□□□□□ -2.06
BRE1Q07457 YPR016W-AYPR016W-A 261 nt2.21□□□□□ -2.06
BRE1Q07457 SEC63YOR254C 1992 nt2.2□□□□□ -2.06
BRE1Q07457 YDL240C-AYDL240C-A 138 nt2.2□□□□□ -2.06
BRE1Q07457 YIL059CYIL059C 366 nt2.2□□□□□ -2.06
BRE1Q07457 GUP1YGL084C 1683 nt2.2□□□□□ -2.06
BRE1Q07457 NOP14YDL148C 2433 nt2.2□□□□□ -2.06
BRE1Q07457 SAC3YDR159W 3906 nt2.19□□□□□ -2.06
BRE1Q07457 VPS34YLR240W 2628 nt2.19□□□□□ -2.06
BRE1Q07457 YHR073W-AYHR073W-A 177 nt2.19□□□□□ -2.06
BRE1Q07457 YNL114CYNL114C 372 nt2.19□□□□□ -2.06
BRE1Q07457 HHT1YBR010W 411 nt2.19□□□□□ -2.06
BRE1Q07457 FMP23YBR047W 528 nt2.19□□□□□ -2.06
BRE1Q07457 SWI6YLR182W 2412 nt2.18□□□□□ -2.06
BRE1Q07457 YOR343W-BYOR343W-B 5313 nt2.18□□□□□ -2.06
BRE1Q07457 PRE4YFR050C 801 nt2.18□□□□□ -2.06
BRE1Q07457 YLR146W-AYLR146W-A 189 nt2.18□□□□□ -2.06
BRE1Q07457 YMR272W-BYMR272W-B 108 nt2.18□□□□□ -2.06
BRE1Q07457 YOR093CYOR093C 4947 nt2.18□□□□□ -2.06
BRE1Q07457 SWI5YDR146C 2130 nt2.18□□□□□ -2.06
BRE1Q07457 ARP7YPR034W 1434 nt2.17□□□□□ -2.06
BRE1Q07457 YJR039WYJR039W 3366 nt2.17□□□□□ -2.06
BRE1Q07457 YBL073WYBL073W 312 nt2.17□□□□□ -2.06
BRE1Q07457 EFR3YMR212C 2349 nt2.17□□□□□ -2.06
BRE1Q07457 SEY1YOR165W 2331 nt2.17□□□□□ -2.06
BRE1Q07457 PLC1YPL268W 2610 nt2.16□□□□□ -2.06
BRE1Q07457 YNL144CYNL144C 2223 nt2.16□□□□□ -2.06
BRE1Q07457 IRE1YHR079C 3348 nt2.16□□□□□ -2.06
BRE1Q07457 PKH3YDR466W 2697 nt2.15□□□□□ -2.06
BRE1Q07457 DCP2YNL118C 2913 nt2.15□□□□□ -2.06
BRE1Q07457 YDR008CYDR008C 351 nt2.15□□□□□ -2.07
BRE1Q07457 TDA9YML081W 3756 nt2.14□□□□□ -2.07
BRE1Q07457 GCN2YDR283C 4980 nt2.14□□□□□ -2.07
BRE1Q07457 LHS1YKL073W 2646 nt2.14□□□□□ -2.07
BRE1Q07457 UBR2YLR024C 5619 nt2.13□□□□□ -2.07
BRE1Q07457 YJR011CYJR011C 786 nt2.13□□□□□ -2.07
BRE1Q07457 YKL136WYKL136W 399 nt2.13□□□□□ -2.07
BRE1Q07457 IRR1YIL026C 3453 nt2.12□□□□□ -2.07
BRE1Q07457 HDA3YPR179C 1968 nt2.12□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 73.4 ms