Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 YER039C-AYER039C-A 219 nt3.24□□□□□ -1.89
HDA3Q06623 INP52YNL106C 3552 nt3.24□□□□□ -1.89
HDA3Q06623 YFR016CYFR016C 3702 nt3.24□□□□□ -1.89
HDA3Q06623 IRR1YIL026C 3453 nt3.23□□□□□ -1.89
HDA3Q06623 SPC98YNL126W 2541 nt3.23□□□□□ -1.89
HDA3Q06623 TAE2YPL009C 3117 nt3.23□□□□□ -1.89
HDA3Q06623 RPL42BYHR141C 321 nt3.23□□□□□ -1.89
HDA3Q06623 YBL012CYBL012C 402 nt3.23□□□□□ -1.89
HDA3Q06623 RPL42AYNL162W 321 nt3.23□□□□□ -1.89
HDA3Q06623 SNQ2YDR011W 4506 nt3.23□□□□□ -1.89
HDA3Q06623 RGR1YLR071C 3249 nt3.23□□□□□ -1.89
HDA3Q06623 NCA2YPR155C 1851 nt3.22□□□□□ -1.89
HDA3Q06623 POL2YNL262W 6669 nt3.22□□□□□ -1.89
HDA3Q06623 PTP3YER075C 2787 nt3.22□□□□□ -1.89
HDA3Q06623 YKL165C-AYKL165C-A 234 nt3.22□□□□□ -1.89
HDA3Q06623 RPL20AYMR242C 519 nt3.22□□□□□ -1.89
HDA3Q06623 YBR221W-AYBR221W-A 105 nt3.22□□□□□ -1.89
HDA3Q06623 MSC6YOR354C 2079 nt3.22□□□□□ -1.89
HDA3Q06623 TFC8YPL007C 1767 nt3.22□□□□□ -1.89
HDA3Q06623 CRM1YGR218W 3255 nt3.22□□□□□ -1.89
HDA3Q06623 YDR186CYDR186C 2634 nt3.22□□□□□ -1.89
HDA3Q06623 SQS1YNL224C 2304 nt3.21□□□□□ -1.89
HDA3Q06623 DRS2YAL026C 4068 nt3.21□□□□□ -1.9
HDA3Q06623 YJL022WYJL022W 309 nt3.21□□□□□ -1.9
HDA3Q06623 YOR073W-AYOR073W-A 234 nt3.21□□□□□ -1.9
HDA3Q06623 MNL2YLR057W 2550 nt3.21□□□□□ -1.9
HDA3Q06623 SIR3YLR442C 2937 nt3.21□□□□□ -1.9
HDA3Q06623 VAS1YGR094W 3315 nt3.2□□□□□ -1.9
HDA3Q06623 YHL005CYHL005C 393 nt3.2□□□□□ -1.9
HDA3Q06623 YHL015W-AYHL015W-A 84 nt3.2□□□□□ -1.9
HDA3Q06623 AFI1YOR129C 2682 nt3.2□□□□□ -1.9
HDA3Q06623 RGA2YDR379W 3030 nt3.19□□□□□ -1.9
HDA3Q06623 YMR122W-AYMR122W-A 255 nt3.19□□□□□ -1.9
HDA3Q06623 FLO5YHR211W 3228 nt3.19□□□□□ -1.9
HDA3Q06623 UBP14YBR058C 2346 nt3.19□□□□□ -1.9
HDA3Q06623 SPO21YOL091W 1830 nt3.19□□□□□ -1.9
HDA3Q06623 NET1YJL076W 3570 nt3.18□□□□□ -1.9
HDA3Q06623 HAL9YOL089C 3093 nt3.18□□□□□ -1.9
HDA3Q06623 ATG13YPR185W 2217 nt3.18□□□□□ -1.9
HDA3Q06623 SRP14YDL092W 441 nt3.18□□□□□ -1.9
HDA3Q06623 SWI5YDR146C 2130 nt3.18□□□□□ -1.9
HDA3Q06623 tC(GCA)BtC(GCA)B 72 nt3.18□□□□□ -1.9
HDA3Q06623 tC(GCA)GtC(GCA)G 72 nt3.18□□□□□ -1.9
HDA3Q06623 tC(GCA)P1tC(GCA)P1 72 nt3.18□□□□□ -1.9
HDA3Q06623 tC(GCA)P2tC(GCA)P2 72 nt3.18□□□□□ -1.9
HDA3Q06623 YHR071C-AYHR071C-A 321 nt3.18□□□□□ -1.9
HDA3Q06623 YHR073W-AYHR073W-A 177 nt3.18□□□□□ -1.9
HDA3Q06623 YOR102WYOR102W 351 nt3.18□□□□□ -1.9
HDA3Q06623 YMR317WYMR317W 3423 nt3.18□□□□□ -1.9
HDA3Q06623 YKU80YMR106C 1890 nt3.18□□□□□ -1.9
HDA3Q06623 VPS16YPL045W 2397 nt3.17□□□□□ -1.9
HDA3Q06623 YAL064W-BYAL064W-B 381 nt3.17□□□□□ -1.9
HDA3Q06623 ACM1YPL267W 630 nt3.17□□□□□ -1.9
HDA3Q06623 BUD4YJR092W 4344 nt3.17□□□□□ -1.9
HDA3Q06623 YHR080CYHR080C 4038 nt3.16□□□□□ -1.9
HDA3Q06623 FUN30YAL019W 3396 nt3.16□□□□□ -1.9
HDA3Q06623 YDL196WYDL196W 330 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)DtK(UUU)D 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)G1tK(UUU)G1 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)G2tK(UUU)G2 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)KtK(UUU)K 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)LtK(UUU)L 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)OtK(UUU)O 73 nt3.16□□□□□ -1.9
HDA3Q06623 tK(UUU)PtK(UUU)P 73 nt3.16□□□□□ -1.9
HDA3Q06623 CRS5YOR031W 210 nt3.16□□□□□ -1.9
HDA3Q06623 CSR2YPR030W 3366 nt3.16□□□□□ -1.9
HDA3Q06623 STB4YMR019W 2850 nt3.16□□□□□ -1.9
HDA3Q06623 CIN8YEL061C 3003 nt3.16□□□□□ -1.9
HDA3Q06623 LYS14YDR034C 2373 nt3.16□□□□□ -1.9
HDA3Q06623 ZRG8YER033C 3231 nt3.15□□□□□ -1.9
HDA3Q06623 SPO22YIL073C 2928 nt3.15□□□□□ -1.9
HDA3Q06623 EMP24YGL200C 612 nt3.15□□□□□ -1.91
HDA3Q06623 YJL120WYJL120W 324 nt3.15□□□□□ -1.91
HDA3Q06623 YLR154C-HYLR154C-H 132 nt3.15□□□□□ -1.91
HDA3Q06623 YLR156C-AYLR156C-A 132 nt3.15□□□□□ -1.91
HDA3Q06623 YLR157C-CYLR157C-C 132 nt3.15□□□□□ -1.91
HDA3Q06623 YLR159C-AYLR159C-A 132 nt3.15□□□□□ -1.91
HDA3Q06623 RPS25BYLR333C 327 nt3.15□□□□□ -1.91
HDA3Q06623 GCV2YMR189W 3105 nt3.15□□□□□ -1.91
HDA3Q06623 DUG2YBR281C 2637 nt3.15□□□□□ -1.91
HDA3Q06623 SDC25YLL016W 3147 nt3.15□□□□□ -1.91
HDA3Q06623 RPS28BYLR264W 204 nt3.14□□□□□ -1.91
HDA3Q06623 RPS17AYML024W 411 nt3.14□□□□□ -1.91
HDA3Q06623 MNE1YOR350C 1992 nt3.14□□□□□ -1.91
HDA3Q06623 UTP14YML093W 2700 nt3.13□□□□□ -1.91
HDA3Q06623 YIL080WYIL080W 4722 nt3.13□□□□□ -1.91
HDA3Q06623 CHS2YBR038W 2892 nt3.13□□□□□ -1.91
HDA3Q06623 YCR043CYCR043C 384 nt3.13□□□□□ -1.91
HDA3Q06623 RPL6AYML073C 531 nt3.13□□□□□ -1.91
HDA3Q06623 FIG4YNL325C 2640 nt3.12□□□□□ -1.91
HDA3Q06623 YLL019W-AYLL019W-A 93 nt3.12□□□□□ -1.91
HDA3Q06623 YBR277CYBR277C 402 nt3.12□□□□□ -1.91
HDA3Q06623 GIS1YDR096W 2685 nt3.12□□□□□ -1.91
HDA3Q06623 YDR341CYDR341C 1824 nt3.12□□□□□ -1.91
HDA3Q06623 ROM1YGR070W 3468 nt3.12□□□□□ -1.91
HDA3Q06623 MAK21YDR060W 3078 nt3.11□□□□□ -1.91
HDA3Q06623 SLH1YGR271W 5904 nt3.11□□□□□ -1.91
HDA3Q06623 ACB1YGR037C 264 nt3.11□□□□□ -1.91
HDA3Q06623 SLM1YIL105C 2061 nt3.11□□□□□ -1.91
HDA3Q06623 MDM1YML104C 3384 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms