Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 IMP3YHR148W 552 nt0.11□□□□□ -2.39
LSM6Q06406 YBL068W-AYBL068W-A 237 nt0.11□□□□□ -2.39
LSM6Q06406 SLD3YGL113W 2007 nt0.11□□□□□ -2.39
LSM6Q06406 ZIP1YDR285W 2628 nt0.11□□□□□ -2.39
LSM6Q06406 UTP20YBL004W 7482 nt0.1□□□□□ -2.39
LSM6Q06406 HDA3YPR179C 1968 nt0.1□□□□□ -2.39
LSM6Q06406 RPL29YFR032C-A 180 nt0.1□□□□□ -2.39
LSM6Q06406 RPS24BYIL069C 408 nt0.1□□□□□ -2.39
LSM6Q06406 TRS65YGR166W 1683 nt0.1□□□□□ -2.39
LSM6Q06406 YSP1YHR155W 3687 nt0.1□□□□□ -2.39
LSM6Q06406 GEA2YEL022W 4380 nt0.1□□□□□ -2.39
LSM6Q06406 PPN1YDR452W 2025 nt0.09□□□□□ -2.39
LSM6Q06406 YFR032C-BYFR032C-B 264 nt0.09□□□□□ -2.4
LSM6Q06406 PRE4YFR050C 801 nt0.09□□□□□ -2.4
LSM6Q06406 YOP1YPR028W 543 nt0.09□□□□□ -2.4
LSM6Q06406 YPR172WYPR172W 603 nt0.09□□□□□ -2.4
LSM6Q06406 SCW11YGL028C 1629 nt0.09□□□□□ -2.4
LSM6Q06406 NUP82YJL061W 2142 nt0.08□□□□□ -2.4
LSM6Q06406 AI5_ALPHAQ0070 1893 nt0.08□□□□□ -2.4
LSM6Q06406 YDR003W-AYDR003W-A 123 nt0.08□□□□□ -2.4
LSM6Q06406 YHL002C-AYHL002C-A 489 nt0.08□□□□□ -2.4
LSM6Q06406 YIL134C-AYIL134C-A 204 nt0.08□□□□□ -2.4
LSM6Q06406 SPR2YOR214C 711 nt0.08□□□□□ -2.4
LSM6Q06406 BFR2YDR299W 1605 nt0.08□□□□□ -2.4
LSM6Q06406 YMR160WYMR160W 2451 nt0.08□□□□□ -2.4
LSM6Q06406 YNL054W-BYNL054W-B 5250 nt0.07□□□□□ -2.4
LSM6Q06406 SLI15YBR156C 2097 nt0.07□□□□□ -2.4
LSM6Q06406 RSM18YER050C 417 nt0.07□□□□□ -2.4
LSM6Q06406 SBH1YER087C-B 249 nt0.07□□□□□ -2.4
LSM6Q06406 YGL042CYGL042C 306 nt0.07□□□□□ -2.4
LSM6Q06406 THG1YGR024C 714 nt0.07□□□□□ -2.4
LSM6Q06406 INA22YIR024C 651 nt0.07□□□□□ -2.4
LSM6Q06406 RPS7BYNL096C 573 nt0.07□□□□□ -2.4
LSM6Q06406 WAR1YML076C 2835 nt0.07□□□□□ -2.4
LSM6Q06406 YCK3YER123W 1575 nt0.06□□□□□ -2.4
LSM6Q06406 YDL068WYDL068W 330 nt0.06□□□□□ -2.4
LSM6Q06406 YEL030C-AYEL030C-A 315 nt0.06□□□□□ -2.4
LSM6Q06406 ISD11YER048W-A 285 nt0.06□□□□□ -2.4
LSM6Q06406 LSM12YHR121W 564 nt0.06□□□□□ -2.4
LSM6Q06406 SDH2YLL041C 801 nt0.06□□□□□ -2.4
LSM6Q06406 CHS6YJL099W 2241 nt0.06□□□□□ -2.4
LSM6Q06406 NTF2YER009W 378 nt0.05□□□□□ -2.4
LSM6Q06406 RPL26BYGR034W 384 nt0.05□□□□□ -2.4
LSM6Q06406 PAI3YMR174C 207 nt0.05□□□□□ -2.4
LSM6Q06406 KAR1YNL188W 1302 nt0.05□□□□□ -2.4
LSM6Q06406 SWI5YDR146C 2130 nt0.04□□□□□ -2.4
LSM6Q06406 TAD1YGL243W 1203 nt0.04□□□□□ -2.4
LSM6Q06406 TIM8YJR135W-A 264 nt0.04□□□□□ -2.4
LSM6Q06406 GSP1YLR293C 660 nt0.04□□□□□ -2.4
LSM6Q06406 IRC13YOR235W 315 nt0.04□□□□□ -2.4
LSM6Q06406 MMS4YBR098W 2076 nt0.04□□□□□ -2.4
LSM6Q06406 RPL37AYLR185W 267 nt0.03□□□□□ -2.4
LSM6Q06406 UBX4YMR067C 1251 nt0.03□□□□□ -2.4
LSM6Q06406 YOL013W-AYOL013W-A 192 nt0.03□□□□□ -2.4
LSM6Q06406 AFR1YDR085C 1863 nt0.03□□□□□ -2.41
LSM6Q06406 NPR2YEL062W 1848 nt0.02□□□□□ -2.41
LSM6Q06406 YHR028W-AYHR028W-A 321 nt0.02□□□□□ -2.41
LSM6Q06406 YJL086CYJL086C 369 nt0.02□□□□□ -2.41
LSM6Q06406 YOR072W-AYOR072W-A 249 nt0.02□□□□□ -2.41
LSM6Q06406 ULP2YIL031W 3105 nt0.01□□□□□ -2.41
LSM6Q06406 HTD2YHR067W 843 nt0.01□□□□□ -2.41
LSM6Q06406 HIT1YJR055W 495 nt0.01□□□□□ -2.41
LSM6Q06406 SPC24YMR117C 642 nt0.01□□□□□ -2.41
LSM6Q06406 YPR153WYPR153W 423 nt0.01□□□□□ -2.41
LSM6Q06406 HNT1YDL125C 477 nt0□□□□□ -2.41
LSM6Q06406 LCD1YDR499W 2244 nt0□□□□□ -2.41
LSM6Q06406 YGL204CYGL204C 306 nt0□□□□□ -2.41
LSM6Q06406 YGR042WYGR042W 816 nt0□□□□□ -2.41
LSM6Q06406 MDM32YOR147W 1869 nt0□□□□□ -2.41
LSM6Q06406 SLY1YDR189W 2001 nt-0.01□□□□□ -2.41
LSM6Q06406 COX12YLR038C 252 nt-0.01□□□□□ -2.41
LSM6Q06406 YOR108C-AYOR108C-A 210 nt-0.01□□□□□ -2.41
LSM6Q06406 ALY2YJL084C 3141 nt-0.01□□□□□ -2.41
LSM6Q06406 NUP120YKL057C 3114 nt-0.01□□□□□ -2.41
LSM6Q06406 YBL100W-BYBL100W-B 5313 nt-0.02□□□□□ -2.41
LSM6Q06406 YDR115WYDR115W 318 nt-0.02□□□□□ -2.41
LSM6Q06406 MET32YDR253C 576 nt-0.02□□□□□ -2.41
LSM6Q06406 YHR139C-AYHR139C-A 312 nt-0.02□□□□□ -2.41
LSM6Q06406 YLR163W-AYLR163W-A 114 nt-0.02□□□□□ -2.41
LSM6Q06406 ARV1YLR242C 966 nt-0.02□□□□□ -2.41
LSM6Q06406 VPS63YLR261C 327 nt-0.02□□□□□ -2.41
LSM6Q06406 YOR282WYOR282W 321 nt-0.02□□□□□ -2.41
LSM6Q06406 YGR290WYGR290W 444 nt-0.03□□□□□ -2.41
LSM6Q06406 ANS1YHR126C 480 nt-0.03□□□□□ -2.41
LSM6Q06406 IQG1YPL242C 4488 nt-0.03□□□□□ -2.41
LSM6Q06406 PMP1YCR024C-A 123 nt-0.04□□□□□ -2.42
LSM6Q06406 YEL057CYEL057C 702 nt-0.04□□□□□ -2.42
LSM6Q06406 YOR366WYOR366W 354 nt-0.04□□□□□ -2.42
LSM6Q06406 APL2YKL135C 2181 nt-0.04□□□□□ -2.42
LSM6Q06406 ATC1YDR184C 885 nt-0.05□□□□□ -2.42
LSM6Q06406 PSF2YJL072C 642 nt-0.05□□□□□ -2.42
LSM6Q06406 YOR020W-AYOR020W-A 273 nt-0.05□□□□□ -2.42
LSM6Q06406 YPL080CYPL080C 327 nt-0.05□□□□□ -2.42
LSM6Q06406 LOA1YPR139C 903 nt-0.05□□□□□ -2.42
LSM6Q06406 15S_rRNA15S_rRNA 1649 nt-0.05□□□□□ -2.42
LSM6Q06406 VIK1YPL253C 1944 nt-0.06□□□□□ -2.42
LSM6Q06406 YDR114CYDR114C 303 nt-0.06□□□□□ -2.42
LSM6Q06406 UPS1YLR193C 528 nt-0.06□□□□□ -2.42
LSM6Q06406 ATP20YPR020W 348 nt-0.06□□□□□ -2.42
LSM6Q06406 GUP1YGL084C 1683 nt-0.06□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 48.4 ms