Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YHR175W-AYHR175W-A 150 nt1.92□□□□□ -2.1
VPS38Q05919 YAR047CYAR047C 321 nt1.92□□□□□ -2.1
VPS38Q05919 CGI121YML036W 546 nt1.92□□□□□ -2.1
VPS38Q05919 RPL42BYHR141C 321 nt1.91□□□□□ -2.1
VPS38Q05919 TMA7YLR262C-A 195 nt1.91□□□□□ -2.1
VPS38Q05919 RPL9BYNL067W 576 nt1.91□□□□□ -2.1
VPS38Q05919 RPL42AYNL162W 321 nt1.91□□□□□ -2.1
VPS38Q05919 UBR2YLR024C 5619 nt1.91□□□□□ -2.1
VPS38Q05919 FAB1YFR019W 6837 nt1.91□□□□□ -2.1
VPS38Q05919 YHR214C-BYHR214C-B 5382 nt1.91□□□□□ -2.1
VPS38Q05919 YJR098CYJR098C 1971 nt1.9□□□□□ -2.1
VPS38Q05919 YDR008CYDR008C 351 nt1.9□□□□□ -2.11
VPS38Q05919 RPL32YBL092W 393 nt1.9□□□□□ -2.11
VPS38Q05919 AGC1YPR021C 2709 nt1.9□□□□□ -2.11
VPS38Q05919 IRC20YLR247C 4671 nt1.9□□□□□ -2.11
VPS38Q05919 MGA2YIR033W 3342 nt1.89□□□□□ -2.11
VPS38Q05919 HCS1YKL017C 2052 nt1.89□□□□□ -2.11
VPS38Q05919 CFT2YLR115W 2580 nt1.89□□□□□ -2.11
VPS38Q05919 GIM4YEL003W 336 nt1.89□□□□□ -2.11
VPS38Q05919 TIM13YGR181W 318 nt1.89□□□□□ -2.11
VPS38Q05919 HIT1YJR055W 495 nt1.89□□□□□ -2.11
VPS38Q05919 YNL114CYNL114C 372 nt1.89□□□□□ -2.11
VPS38Q05919 YOR029WYOR029W 336 nt1.89□□□□□ -2.11
VPS38Q05919 ATG31YDR022C 591 nt1.88□□□□□ -2.11
VPS38Q05919 YER088C-AYER088C-A 324 nt1.88□□□□□ -2.11
VPS38Q05919 TMA10YLR327C 261 nt1.88□□□□□ -2.11
VPS38Q05919 PEP1YBL017C 4740 nt1.88□□□□□ -2.11
VPS38Q05919 TFC8YPL007C 1767 nt1.87□□□□□ -2.11
VPS38Q05919 YER137W-AYER137W-A 306 nt1.87□□□□□ -2.11
VPS38Q05919 tR(ACG)Q2tR(ACG)Q2 74 nt1.87□□□□□ -2.11
VPS38Q05919 YHR028W-AYHR028W-A 321 nt1.87□□□□□ -2.11
VPS38Q05919 YHR073W-AYHR073W-A 177 nt1.87□□□□□ -2.11
VPS38Q05919 YJL020W-AYJL020W-A 258 nt1.87□□□□□ -2.11
VPS38Q05919 RPS27AYKL156W 249 nt1.87□□□□□ -2.11
VPS38Q05919 YBL073WYBL073W 312 nt1.87□□□□□ -2.11
VPS38Q05919 DFG16YOR030W 1860 nt1.87□□□□□ -2.11
VPS38Q05919 YOR121CYOR121C 306 nt1.87□□□□□ -2.11
VPS38Q05919 TDA9YML081W 3756 nt1.87□□□□□ -2.11
VPS38Q05919 YOR343W-BYOR343W-B 5313 nt1.87□□□□□ -2.11
VPS38Q05919 AIM9YER080W 1884 nt1.86□□□□□ -2.11
VPS38Q05919 LRE1YCL051W 1752 nt1.86□□□□□ -2.11
VPS38Q05919 YML003WYML003W 873 nt1.86□□□□□ -2.11
VPS38Q05919 YBL108WYBL108W 306 nt1.86□□□□□ -2.11
VPS38Q05919 SSQ1YLR369W 1974 nt1.86□□□□□ -2.11
VPS38Q05919 GUP1YGL084C 1683 nt1.86□□□□□ -2.11
VPS38Q05919 PCF11YDR228C 1881 nt1.86□□□□□ -2.11
VPS38Q05919 PEX8YGR077C 1770 nt1.85□□□□□ -2.11
VPS38Q05919 YAP6YDR259C 1152 nt1.85□□□□□ -2.11
VPS38Q05919 PHS1YJL097W 654 nt1.85□□□□□ -2.11
VPS38Q05919 YBR012CYBR012C 420 nt1.85□□□□□ -2.11
VPS38Q05919 UTP21YLR409C 2820 nt1.85□□□□□ -2.11
VPS38Q05919 YGR250CYGR250C 2346 nt1.84□□□□□ -2.11
VPS38Q05919 ABM1YJR108W 372 nt1.84□□□□□ -2.11
VPS38Q05919 MCM22YJR135C 720 nt1.84□□□□□ -2.11
VPS38Q05919 PAU18YLL064C 363 nt1.84□□□□□ -2.11
VPS38Q05919 PAU6YNR076W 363 nt1.84□□□□□ -2.11
VPS38Q05919 HHT1YBR010W 411 nt1.84□□□□□ -2.11
VPS38Q05919 CFT1YDR301W 4074 nt1.84□□□□□ -2.12
VPS38Q05919 SEC63YOR254C 1992 nt1.83□□□□□ -2.12
VPS38Q05919 HDA3YPR179C 1968 nt1.83□□□□□ -2.12
VPS38Q05919 SEY1YOR165W 2331 nt1.83□□□□□ -2.12
VPS38Q05919 MSC6YOR354C 2079 nt1.83□□□□□ -2.12
VPS38Q05919 RPL26AYLR344W 384 nt1.83□□□□□ -2.12
VPS38Q05919 ISF1YMR081C 1017 nt1.83□□□□□ -2.12
VPS38Q05919 FMP23YBR047W 528 nt1.83□□□□□ -2.12
VPS38Q05919 YGR265WYGR265W 411 nt1.82□□□□□ -2.12
VPS38Q05919 YKL083WYKL083W 615 nt1.82□□□□□ -2.12
VPS38Q05919 YLR146W-AYLR146W-A 189 nt1.82□□□□□ -2.12
VPS38Q05919 YPL229WYPL229W 621 nt1.82□□□□□ -2.12
VPS38Q05919 YCL046WYCL046W 324 nt1.82□□□□□ -2.12
VPS38Q05919 CTR9YOL145C 3234 nt1.82□□□□□ -2.12
VPS38Q05919 HIR3YJR140C 4947 nt1.81□□□□□ -2.12
VPS38Q05919 PRE4YFR050C 801 nt1.81□□□□□ -2.12
VPS38Q05919 YGR035CYGR035C 351 nt1.81□□□□□ -2.12
VPS38Q05919 YAL063C-AYAL063C-A 291 nt1.81□□□□□ -2.12
VPS38Q05919 HCH1YNL281W 462 nt1.81□□□□□ -2.12
VPS38Q05919 YOL159C-AYOL159C-A 273 nt1.81□□□□□ -2.12
VPS38Q05919 MYO4YAL029C 4416 nt1.81□□□□□ -2.12
VPS38Q05919 SWI5YDR146C 2130 nt1.81□□□□□ -2.12
VPS38Q05919 YNL144CYNL144C 2223 nt1.81□□□□□ -2.12
VPS38Q05919 ZRG17YNR039C 1818 nt1.8□□□□□ -2.12
VPS38Q05919 YGR174W-AYGR174W-A 87 nt1.8□□□□□ -2.12
VPS38Q05919 OSH6YKR003W 1347 nt1.8□□□□□ -2.12
VPS38Q05919 IRE1YHR079C 3348 nt1.8□□□□□ -2.12
VPS38Q05919 YJR039WYJR039W 3366 nt1.79□□□□□ -2.12
VPS38Q05919 YJR003CYJR003C 1560 nt1.79□□□□□ -2.12
VPS38Q05919 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
VPS38Q05919 RLM1YPL089C 2031 nt1.79□□□□□ -2.12
VPS38Q05919 PXA2YKL188C 2562 nt1.79□□□□□ -2.12
VPS38Q05919 RTR1YER139C 681 nt1.78□□□□□ -2.12
VPS38Q05919 YHR210CYHR210C 1026 nt1.78□□□□□ -2.12
VPS38Q05919 SWI6YLR182W 2412 nt1.78□□□□□ -2.12
VPS38Q05919 MSH6YDR097C 3729 nt1.78□□□□□ -2.13
VPS38Q05919 MSH5YDL154W 2706 nt1.77□□□□□ -2.13
VPS38Q05919 MAK10YEL053C 2202 nt1.77□□□□□ -2.13
VPS38Q05919 YIL059CYIL059C 366 nt1.77□□□□□ -2.13
VPS38Q05919 YCL023CYCL023C 348 nt1.77□□□□□ -2.13
VPS38Q05919 TBS1YBR150C 3285 nt1.76□□□□□ -2.13
VPS38Q05919 NOP53YPL146C 1368 nt1.76□□□□□ -2.13
VPS38Q05919 HSH155YMR288W 2916 nt1.76□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms