Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YIL032CYIL032C 357 nt2.27□□□□□ -2.05
HRD3Q05787 RIM20YOR275C 1986 nt2.27□□□□□ -2.05
HRD3Q05787 MLH1YMR167W 2310 nt2.26□□□□□ -2.05
HRD3Q05787 UTP22YGR090W 3714 nt2.26□□□□□ -2.05
HRD3Q05787 SGM1YJR134C 2124 nt2.26□□□□□ -2.05
HRD3Q05787 INP51YIL002C 2841 nt2.26□□□□□ -2.05
HRD3Q05787 YDL062WYDL062W 426 nt2.26□□□□□ -2.05
HRD3Q05787 SNC1YAL030W 354 nt2.26□□□□□ -2.05
HRD3Q05787 YAL059C-AYAL059C-A 423 nt2.26□□□□□ -2.05
HRD3Q05787 RPS29AYLR388W 171 nt2.26□□□□□ -2.05
HRD3Q05787 YMR194C-AYMR194C-A 225 nt2.26□□□□□ -2.05
HRD3Q05787 YBR224WYBR224W 516 nt2.26□□□□□ -2.05
HRD3Q05787 YCL023CYCL023C 348 nt2.26□□□□□ -2.05
HRD3Q05787 SSQ1YLR369W 1974 nt2.26□□□□□ -2.05
HRD3Q05787 HDA3YPR179C 1968 nt2.26□□□□□ -2.05
HRD3Q05787 RAD61YDR014W 1944 nt2.26□□□□□ -2.05
HRD3Q05787 YBR184WYBR184W 1572 nt2.26□□□□□ -2.05
HRD3Q05787 HSC82YMR186W 2118 nt2.26□□□□□ -2.05
HRD3Q05787 PUT3YKL015W 2940 nt2.25□□□□□ -2.05
HRD3Q05787 CRM1YGR218W 3255 nt2.25□□□□□ -2.05
HRD3Q05787 BRP1YGL007W 378 nt2.25□□□□□ -2.05
HRD3Q05787 RPA34YJL148W 702 nt2.25□□□□□ -2.05
HRD3Q05787 GIS1YDR096W 2685 nt2.25□□□□□ -2.05
HRD3Q05787 PEX8YGR077C 1770 nt2.25□□□□□ -2.05
HRD3Q05787 UBP15YMR304W 3693 nt2.24□□□□□ -2.05
HRD3Q05787 YHL042WYHL042W 453 nt2.24□□□□□ -2.05
HRD3Q05787 BLI1YKL061W 342 nt2.24□□□□□ -2.05
HRD3Q05787 YLR053CYLR053C 327 nt2.24□□□□□ -2.05
HRD3Q05787 snR49snR49 165 nt2.24□□□□□ -2.05
HRD3Q05787 YEL043WYEL043W 2871 nt2.24□□□□□ -2.05
HRD3Q05787 INO80YGL150C 4470 nt2.24□□□□□ -2.05
HRD3Q05787 PHO2YDL106C 1680 nt2.24□□□□□ -2.05
HRD3Q05787 PEP3YLR148W 2757 nt2.24□□□□□ -2.05
HRD3Q05787 SEF1YBL066C 3447 nt2.24□□□□□ -2.05
HRD3Q05787 VPH1YOR270C 2523 nt2.24□□□□□ -2.05
HRD3Q05787 UBP1YDL122W 2430 nt2.23□□□□□ -2.05
HRD3Q05787 FAR11YNL127W 2862 nt2.23□□□□□ -2.05
HRD3Q05787 CDC27YBL084C 2277 nt2.23□□□□□ -2.05
HRD3Q05787 PRE4YFR050C 801 nt2.23□□□□□ -2.05
HRD3Q05787 ALG13YGL047W 609 nt2.23□□□□□ -2.05
HRD3Q05787 YNL018CYNL018C 1839 nt2.23□□□□□ -2.05
HRD3Q05787 ATG11YPR049C 3537 nt2.22□□□□□ -2.05
HRD3Q05787 EDS1YBR033W 2760 nt2.22□□□□□ -2.05
HRD3Q05787 NUP120YKL057C 3114 nt2.22□□□□□ -2.05
HRD3Q05787 MNL2YLR057W 2550 nt2.22□□□□□ -2.05
HRD3Q05787 CBF2YGR140W 2871 nt2.22□□□□□ -2.05
HRD3Q05787 KRE33YNL132W 3171 nt2.22□□□□□ -2.05
HRD3Q05787 NPC2YDL046W 522 nt2.22□□□□□ -2.05
HRD3Q05787 CDC36YDL165W 576 nt2.22□□□□□ -2.05
HRD3Q05787 RPL38YLR325C 237 nt2.22□□□□□ -2.05
HRD3Q05787 YOR008C-AYOR008C-A 225 nt2.22□□□□□ -2.05
HRD3Q05787 HHT1YBR010W 411 nt2.22□□□□□ -2.05
HRD3Q05787 DAD3YBR233W-A 285 nt2.22□□□□□ -2.05
HRD3Q05787 SWA2YDR320C 2007 nt2.22□□□□□ -2.05
HRD3Q05787 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
HRD3Q05787 YLR149CYLR149C 2193 nt2.22□□□□□ -2.05
HRD3Q05787 YGL041CYGL041C 204 nt2.21□□□□□ -2.06
HRD3Q05787 PCC1YKR095W-A 267 nt2.21□□□□□ -2.06
HRD3Q05787 SDH2YLL041C 801 nt2.21□□□□□ -2.06
HRD3Q05787 BNI1YNL271C 5862 nt2.2□□□□□ -2.06
HRD3Q05787 SCH9YHR205W 2475 nt2.2□□□□□ -2.06
HRD3Q05787 EFR3YMR212C 2349 nt2.2□□□□□ -2.06
HRD3Q05787 VMR1YHL035C 4779 nt2.2□□□□□ -2.06
HRD3Q05787 YEL020C-BYEL020C-B 198 nt2.2□□□□□ -2.06
HRD3Q05787 YJL052C-AYJL052C-A 120 nt2.2□□□□□ -2.06
HRD3Q05787 UPS1YLR193C 528 nt2.2□□□□□ -2.06
HRD3Q05787 YML007C-AYML007C-A 111 nt2.2□□□□□ -2.06
HRD3Q05787 COS111YBR203W 2775 nt2.2□□□□□ -2.06
HRD3Q05787 HCS1YKL017C 2052 nt2.19□□□□□ -2.06
HRD3Q05787 ARP7YPR034W 1434 nt2.19□□□□□ -2.06
HRD3Q05787 snR60snR60 104 nt2.19□□□□□ -2.06
HRD3Q05787 YDR406W-AYDR406W-A 246 nt2.19□□□□□ -2.06
HRD3Q05787 YDR426CYDR426C 378 nt2.19□□□□□ -2.06
HRD3Q05787 EMP24YGL200C 612 nt2.19□□□□□ -2.06
HRD3Q05787 YMR046W-AYMR046W-A 129 nt2.19□□□□□ -2.06
HRD3Q05787 ABF2YMR072W 552 nt2.19□□□□□ -2.06
HRD3Q05787 YOR225WYOR225W 330 nt2.19□□□□□ -2.06
HRD3Q05787 YOR333CYOR333C 417 nt2.19□□□□□ -2.06
HRD3Q05787 SPO22YIL073C 2928 nt2.19□□□□□ -2.06
HRD3Q05787 CSF1YLR087C 8877 nt2.19□□□□□ -2.06
HRD3Q05787 GRR1YJR090C 3456 nt2.19□□□□□ -2.06
HRD3Q05787 COG8YML071C 1824 nt2.19□□□□□ -2.06
HRD3Q05787 SSD1YDR293C 3753 nt2.19□□□□□ -2.06
HRD3Q05787 VPS34YLR240W 2628 nt2.18□□□□□ -2.06
HRD3Q05787 MCD1YDL003W 1701 nt2.18□□□□□ -2.06
HRD3Q05787 YFH1YDL120W 525 nt2.18□□□□□ -2.06
HRD3Q05787 RPL42BYHR141C 321 nt2.18□□□□□ -2.06
HRD3Q05787 RPL42AYNL162W 321 nt2.18□□□□□ -2.06
HRD3Q05787 NUT2YPR168W 474 nt2.18□□□□□ -2.06
HRD3Q05787 SIR3YLR442C 2937 nt2.18□□□□□ -2.06
HRD3Q05787 YGR250CYGR250C 2346 nt2.17□□□□□ -2.06
HRD3Q05787 Q0032Q0032 291 nt2.17□□□□□ -2.06
HRD3Q05787 YBL083CYBL083C 426 nt2.17□□□□□ -2.06
HRD3Q05787 YOL155W-AYOL155W-A 135 nt2.17□□□□□ -2.06
HRD3Q05787 YPR063CYPR063C 423 nt2.17□□□□□ -2.06
HRD3Q05787 NOP53YPL146C 1368 nt2.17□□□□□ -2.06
HRD3Q05787 STB4YMR019W 2850 nt2.17□□□□□ -2.06
HRD3Q05787 CDC53YDL132W 2448 nt2.16□□□□□ -2.06
HRD3Q05787 SAP185YJL098W 3177 nt2.16□□□□□ -2.06
HRD3Q05787 YLR146W-AYLR146W-A 189 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms