Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.63■□□□□ 0.41
Pfdn6Q03958 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Pfdn6Q03958 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn6Q03958 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.61■□□□□ 0.41
Pfdn6Q03958 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn6Q03958 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn6Q03958 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pfdn6Q03958 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Gm29791-202ENSMUST00000207888 369 ntBASIC17.59■□□□□ 0.41
Pfdn6Q03958 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn6Q03958 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn6Q03958 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn6Q03958 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn6Q03958 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn6Q03958 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn6Q03958 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Gm10138-203ENSMUST00000206952 366 ntBASIC17.58■□□□□ 0.4
Pfdn6Q03958 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn6Q03958 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.57■□□□□ 0.4
Pfdn6Q03958 Mir6349-201ENSMUST00000184059 97 ntBASIC17.57■□□□□ 0.4
Pfdn6Q03958 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn6Q03958 Idnk-204ENSMUST00000226010 1898 ntBASIC17.56■□□□□ 0.4
Pfdn6Q03958 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn6Q03958 Dio3-201ENSMUST00000097228 1449 ntBASIC17.56■□□□□ 0.4
Pfdn6Q03958 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms