Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 NPC2YDL046W 522 nt2.6□□□□□ -1.99
SSL2Q00578 RPS27AYKL156W 249 nt2.6□□□□□ -1.99
SSL2Q00578 YMR230W-AYMR230W-A 189 nt2.6□□□□□ -1.99
SSL2Q00578 YNL010WYNL010W 726 nt2.6□□□□□ -1.99
SSL2Q00578 PAU2YEL049W 363 nt2.59□□□□□ -1.99
SSL2Q00578 YIL059CYIL059C 366 nt2.59□□□□□ -1.99
SSL2Q00578 UPS1YLR193C 528 nt2.59□□□□□ -1.99
SSL2Q00578 RPL38YLR325C 237 nt2.59□□□□□ -1.99
SSL2Q00578 GRX8YLR364W 330 nt2.59□□□□□ -1.99
SSL2Q00578 CYB5YNL111C 363 nt2.59□□□□□ -1.99
SSL2Q00578 SCW11YGL028C 1629 nt2.59□□□□□ -1.99
SSL2Q00578 TMN3YER113C 2121 nt2.59□□□□□ -2
SSL2Q00578 ORC2YBR060C 1863 nt2.58□□□□□ -2
SSL2Q00578 IRC8YJL051W 2469 nt2.58□□□□□ -2
SSL2Q00578 YGR050CYGR050C 357 nt2.58□□□□□ -2
SSL2Q00578 YJL150WYJL150W 303 nt2.58□□□□□ -2
SSL2Q00578 YMR141W-AYMR141W-A 225 nt2.58□□□□□ -2
SSL2Q00578 DOT6YER088C 2013 nt2.58□□□□□ -2
SSL2Q00578 YDR186CYDR186C 2634 nt2.57□□□□□ -2
SSL2Q00578 CLN3YAL040C 1743 nt2.57□□□□□ -2
SSL2Q00578 YDL025W-AYDL025W-A 105 nt2.57□□□□□ -2
SSL2Q00578 tF(GAA)QtF(GAA)Q 75 nt2.57□□□□□ -2
SSL2Q00578 YGL014C-AYGL014C-A 162 nt2.57□□□□□ -2
SSL2Q00578 ACM1YPL267W 630 nt2.57□□□□□ -2
SSL2Q00578 INP53YOR109W 3324 nt2.57□□□□□ -2
SSL2Q00578 PRP6YBR055C 2700 nt2.56□□□□□ -2
SSL2Q00578 HDA3YPR179C 1968 nt2.56□□□□□ -2
SSL2Q00578 PAN3YKL025C 2040 nt2.56□□□□□ -2
SSL2Q00578 YEF3YLR249W 3135 nt2.56□□□□□ -2
SSL2Q00578 YER088C-AYER088C-A 324 nt2.56□□□□□ -2
SSL2Q00578 PRE4YFR050C 801 nt2.56□□□□□ -2
SSL2Q00578 EMC6YLL014W 327 nt2.56□□□□□ -2
SSL2Q00578 YOR015WYOR015W 360 nt2.56□□□□□ -2
SSL2Q00578 RPS12YOR369C 432 nt2.56□□□□□ -2
SSL2Q00578 GUP1YGL084C 1683 nt2.56□□□□□ -2
SSL2Q00578 NEW1YPL226W 3591 nt2.56□□□□□ -2
SSL2Q00578 VPS13YLL040C 9435 nt2.56□□□□□ -2
SSL2Q00578 YGL052WYGL052W 306 nt2.55□□□□□ -2
SSL2Q00578 TRS65YGR166W 1683 nt2.55□□□□□ -2
SSL2Q00578 YGR250CYGR250C 2346 nt2.55□□□□□ -2
SSL2Q00578 VPS35YJL154C 2835 nt2.55□□□□□ -2
SSL2Q00578 HRD3YLR207W 2502 nt2.55□□□□□ -2
SSL2Q00578 SKP2YNL311C 2292 nt2.55□□□□□ -2
SSL2Q00578 HSC82YMR186W 2118 nt2.54□□□□□ -2
SSL2Q00578 BFA1YJR053W 1725 nt2.54□□□□□ -2
SSL2Q00578 YEL043WYEL043W 2871 nt2.54□□□□□ -2
SSL2Q00578 SGD1YLR336C 2700 nt2.54□□□□□ -2
SSL2Q00578 YLR120W-AYLR120W-A 102 nt2.54□□□□□ -2
SSL2Q00578 YOR170WYOR170W 306 nt2.54□□□□□ -2
SSL2Q00578 NUT2YPR168W 474 nt2.54□□□□□ -2
SSL2Q00578 DFG16YOR030W 1860 nt2.54□□□□□ -2
SSL2Q00578 GIS1YDR096W 2685 nt2.54□□□□□ -2
SSL2Q00578 KRE33YNL132W 3171 nt2.53□□□□□ -2
SSL2Q00578 YLR255CYLR255C 354 nt2.53□□□□□ -2
SSL2Q00578 YMR321CYMR321C 318 nt2.53□□□□□ -2
SSL2Q00578 NOP14YDL148C 2433 nt2.53□□□□□ -2
SSL2Q00578 VPS16YPL045W 2397 nt2.53□□□□□ -2
SSL2Q00578 FKS3YMR306W 5358 nt2.53□□□□□ -2.01
SSL2Q00578 SIR3YLR442C 2937 nt2.52□□□□□ -2.01
SSL2Q00578 SAP185YJL098W 3177 nt2.52□□□□□ -2.01
SSL2Q00578 YAL042C-AYAL042C-A 378 nt2.52□□□□□ -2.01
SSL2Q00578 YML007C-AYML007C-A 111 nt2.52□□□□□ -2.01
SSL2Q00578 NUM1YDR150W 8247 nt2.52□□□□□ -2.01
SSL2Q00578 UBP15YMR304W 3693 nt2.52□□□□□ -2.01
SSL2Q00578 TOF2YKR010C 2316 nt2.52□□□□□ -2.01
SSL2Q00578 TRS130YMR218C 3309 nt2.52□□□□□ -2.01
SSL2Q00578 UBP11YKR098C 2154 nt2.51□□□□□ -2.01
SSL2Q00578 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
SSL2Q00578 YDR426CYDR426C 378 nt2.51□□□□□ -2.01
SSL2Q00578 SMD1YGR074W 441 nt2.51□□□□□ -2.01
SSL2Q00578 PCC1YKR095W-A 267 nt2.51□□□□□ -2.01
SSL2Q00578 YNL028WYNL028W 318 nt2.51□□□□□ -2.01
SSL2Q00578 INP51YIL002C 2841 nt2.51□□□□□ -2.01
SSL2Q00578 SCD5YOR329C 2619 nt2.51□□□□□ -2.01
SSL2Q00578 RRP12YPL012W 3687 nt2.5□□□□□ -2.01
SSL2Q00578 ACB1YGR037C 264 nt2.5□□□□□ -2.01
SSL2Q00578 Q0143Q0143 153 nt2.5□□□□□ -2.01
SSL2Q00578 DGR1YNL130C-A 147 nt2.5□□□□□ -2.01
SSL2Q00578 YNL170WYNL170W 396 nt2.5□□□□□ -2.01
SSL2Q00578 CSE2YNR010W 450 nt2.5□□□□□ -2.01
SSL2Q00578 YOR333CYOR333C 417 nt2.5□□□□□ -2.01
SSL2Q00578 ALK2YBL009W 2031 nt2.5□□□□□ -2.01
SSL2Q00578 PTC5YOR090C 1719 nt2.5□□□□□ -2.01
SSL2Q00578 AI5_ALPHAQ0070 1893 nt2.5□□□□□ -2.01
SSL2Q00578 PRP39YML046W 1890 nt2.5□□□□□ -2.01
SSL2Q00578 YOL098CYOL098C 3114 nt2.49□□□□□ -2.01
SSL2Q00578 SSS1YDR086C 243 nt2.49□□□□□ -2.01
SSL2Q00578 INA22YIR024C 651 nt2.49□□□□□ -2.01
SSL2Q00578 YLR342W-AYLR342W-A 174 nt2.49□□□□□ -2.01
SSL2Q00578 VIK1YPL253C 1944 nt2.48□□□□□ -2.01
SSL2Q00578 PHO2YDL106C 1680 nt2.48□□□□□ -2.01
SSL2Q00578 RRP6YOR001W 2202 nt2.48□□□□□ -2.01
SSL2Q00578 NOP10YHR072W-A 177 nt2.48□□□□□ -2.01
SSL2Q00578 SNC2YOR327C 348 nt2.48□□□□□ -2.01
SSL2Q00578 NOP53YPL146C 1368 nt2.48□□□□□ -2.01
SSL2Q00578 LCD1YDR499W 2244 nt2.48□□□□□ -2.01
SSL2Q00578 TRX1YLR043C 312 nt2.47□□□□□ -2.01
SSL2Q00578 YLR140WYLR140W 327 nt2.47□□□□□ -2.01
SSL2Q00578 YBR224WYBR224W 516 nt2.47□□□□□ -2.01
SSL2Q00578 SCH9YHR205W 2475 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 131.6 ms