Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YDL152WYDL152W 366 nt2.16□□□□□ -2.06
VPS4P52917 YMR247W-AYMR247W-A 144 nt2.16□□□□□ -2.06
VPS4P52917 PAN3YKL025C 2040 nt2.15□□□□□ -2.06
VPS4P52917 YHR073W-AYHR073W-A 177 nt2.15□□□□□ -2.07
VPS4P52917 TMA7YLR262C-A 195 nt2.15□□□□□ -2.07
VPS4P52917 PCF11YDR228C 1881 nt2.15□□□□□ -2.07
VPS4P52917 SEF1YBL066C 3447 nt2.14□□□□□ -2.07
VPS4P52917 YDL062WYDL062W 426 nt2.14□□□□□ -2.07
VPS4P52917 YAP6YDR259C 1152 nt2.14□□□□□ -2.07
VPS4P52917 YGR035CYGR035C 351 nt2.14□□□□□ -2.07
VPS4P52917 YLR053CYLR053C 327 nt2.14□□□□□ -2.07
VPS4P52917 DFG16YOR030W 1860 nt2.14□□□□□ -2.07
VPS4P52917 USO1YDL058W 5373 nt2.13□□□□□ -2.07
VPS4P52917 SLM1YIL105C 2061 nt2.13□□□□□ -2.07
VPS4P52917 YHR210CYHR210C 1026 nt2.13□□□□□ -2.07
VPS4P52917 YKR075W-AYKR075W-A 270 nt2.13□□□□□ -2.07
VPS4P52917 RPL26AYLR344W 384 nt2.13□□□□□ -2.07
VPS4P52917 YPR197CYPR197C 564 nt2.13□□□□□ -2.07
VPS4P52917 TOF2YKR010C 2316 nt2.13□□□□□ -2.07
VPS4P52917 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
VPS4P52917 YDR341CYDR341C 1824 nt2.12□□□□□ -2.07
VPS4P52917 RTT101YJL047C 2529 nt2.12□□□□□ -2.07
VPS4P52917 TIM13YGR181W 318 nt2.12□□□□□ -2.07
VPS4P52917 tT(UGU)HtT(UGU)H 72 nt2.12□□□□□ -2.07
VPS4P52917 YJL020W-AYJL020W-A 258 nt2.12□□□□□ -2.07
VPS4P52917 HUG1YML058W-A 207 nt2.12□□□□□ -2.07
VPS4P52917 UTP21YLR409C 2820 nt2.11□□□□□ -2.07
VPS4P52917 YAL063C-AYAL063C-A 291 nt2.11□□□□□ -2.07
VPS4P52917 ISF1YMR081C 1017 nt2.11□□□□□ -2.07
VPS4P52917 PGA1YNL158W 597 nt2.11□□□□□ -2.07
VPS4P52917 HCH1YNL281W 462 nt2.11□□□□□ -2.07
VPS4P52917 YJR003CYJR003C 1560 nt2.1□□□□□ -2.07
VPS4P52917 ATG9YDL149W 2994 nt2.1□□□□□ -2.07
VPS4P52917 MYO4YAL029C 4416 nt2.1□□□□□ -2.07
VPS4P52917 YOR343W-BYOR343W-B 5313 nt2.1□□□□□ -2.07
VPS4P52917 RPL42BYHR141C 321 nt2.1□□□□□ -2.07
VPS4P52917 PHS1YJL097W 654 nt2.1□□□□□ -2.07
VPS4P52917 RPA34YJL148W 702 nt2.1□□□□□ -2.07
VPS4P52917 YKL083WYKL083W 615 nt2.1□□□□□ -2.07
VPS4P52917 YNL058CYNL058C 951 nt2.1□□□□□ -2.07
VPS4P52917 RPL42AYNL162W 321 nt2.1□□□□□ -2.07
VPS4P52917 RPL32YBL092W 393 nt2.1□□□□□ -2.07
VPS4P52917 VPS8YAL002W 3825 nt2.09□□□□□ -2.07
VPS4P52917 TRM3YDL112W 4311 nt2.09□□□□□ -2.07
VPS4P52917 YCR043CYCR043C 384 nt2.09□□□□□ -2.07
VPS4P52917 RPL37BYDR500C 267 nt2.09□□□□□ -2.07
VPS4P52917 RPS27AYKL156W 249 nt2.09□□□□□ -2.07
VPS4P52917 YBL012CYBL012C 402 nt2.09□□□□□ -2.07
VPS4P52917 SYH1YPL105C 2550 nt2.09□□□□□ -2.07
VPS4P52917 AIM9YER080W 1884 nt2.09□□□□□ -2.08
VPS4P52917 YML003WYML003W 873 nt2.08□□□□□ -2.08
VPS4P52917 SFB2YNL049C 2631 nt2.08□□□□□ -2.08
VPS4P52917 ZRG8YER033C 3231 nt2.08□□□□□ -2.08
VPS4P52917 NAM7YMR080C 2916 nt2.07□□□□□ -2.08
VPS4P52917 RPS20YHL015W 366 nt2.07□□□□□ -2.08
VPS4P52917 CYB5YNL111C 363 nt2.07□□□□□ -2.08
VPS4P52917 PLC1YPL268W 2610 nt2.06□□□□□ -2.08
VPS4P52917 MMS22YLR320W 4365 nt2.06□□□□□ -2.08
VPS4P52917 RTR1YER139C 681 nt2.06□□□□□ -2.08
VPS4P52917 YGR174W-AYGR174W-A 87 nt2.06□□□□□ -2.08
VPS4P52917 YKL183C-AYKL183C-A 213 nt2.06□□□□□ -2.08
VPS4P52917 CGI121YML036W 546 nt2.06□□□□□ -2.08
VPS4P52917 YPL229WYPL229W 621 nt2.06□□□□□ -2.08
VPS4P52917 PET309YLR067C 2898 nt2.06□□□□□ -2.08
VPS4P52917 YMR045CYMR045C 5268 nt2.06□□□□□ -2.08
VPS4P52917 GRR1YJR090C 3456 nt2.05□□□□□ -2.08
VPS4P52917 RPH1YER169W 2391 nt2.05□□□□□ -2.08
VPS4P52917 GCN2YDR283C 4980 nt2.05□□□□□ -2.08
VPS4P52917 YCR102W-AYCR102W-A 198 nt2.05□□□□□ -2.08
VPS4P52917 STF2YGR008C 255 nt2.05□□□□□ -2.08
VPS4P52917 YAR053WYAR053W 297 nt2.05□□□□□ -2.08
VPS4P52917 YNL114CYNL114C 372 nt2.05□□□□□ -2.08
VPS4P52917 IRC23YOR044W 474 nt2.05□□□□□ -2.08
VPS4P52917 YPR016W-AYPR016W-A 261 nt2.05□□□□□ -2.08
VPS4P52917 PDR8YLR266C 2106 nt2.05□□□□□ -2.08
VPS4P52917 TUS1YLR425W 3924 nt2.04□□□□□ -2.08
VPS4P52917 YDR008CYDR008C 351 nt2.04□□□□□ -2.08
VPS4P52917 COA6YMR244C-A 315 nt2.04□□□□□ -2.08
VPS4P52917 NUP192YJL039C 5052 nt2.03□□□□□ -2.08
VPS4P52917 YBL073WYBL073W 312 nt2.03□□□□□ -2.08
VPS4P52917 PKH3YDR466W 2697 nt2.03□□□□□ -2.09
VPS4P52917 VPS34YLR240W 2628 nt2.03□□□□□ -2.09
VPS4P52917 BUD2YKL092C 3315 nt2.02□□□□□ -2.09
VPS4P52917 YCR087C-AYCR087C-A 462 nt2.02□□□□□ -2.09
VPS4P52917 BIL1YOR304C-A 231 nt2.02□□□□□ -2.09
VPS4P52917 DCP2YNL118C 2913 nt2.02□□□□□ -2.09
VPS4P52917 MGA2YIR033W 3342 nt2.02□□□□□ -2.09
VPS4P52917 SBE22YHR103W 2559 nt2.02□□□□□ -2.09
VPS4P52917 CAT2YML042W 2013 nt2.01□□□□□ -2.09
VPS4P52917 HSL1YKL101W 4557 nt2.01□□□□□ -2.09
VPS4P52917 IRR1YIL026C 3453 nt2.01□□□□□ -2.09
VPS4P52917 HER1YOR227W 3741 nt2.01□□□□□ -2.09
VPS4P52917 SEY1YOR165W 2331 nt2.01□□□□□ -2.09
VPS4P52917 YDL240C-AYDL240C-A 138 nt2□□□□□ -2.09
VPS4P52917 HHT1YBR010W 411 nt2□□□□□ -2.09
VPS4P52917 YOR093CYOR093C 4947 nt2□□□□□ -2.09
VPS4P52917 tW(UCA)QtW(UCA)Q 74 nt1.99□□□□□ -2.09
VPS4P52917 MCM22YJR135C 720 nt1.99□□□□□ -2.09
VPS4P52917 YLR146W-AYLR146W-A 189 nt1.99□□□□□ -2.09
VPS4P52917 SWI5YDR146C 2130 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms