Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 VMR1YHL035C 4779 nt3.48□□□□□ -1.85
NUP42P49686 YDR464C-AYDR464C-A 189 nt3.48□□□□□ -1.85
NUP42P49686 ZIP2YGL249W 2115 nt3.48□□□□□ -1.85
NUP42P49686 YAL042C-AYAL042C-A 378 nt3.48□□□□□ -1.85
NUP42P49686 RPS28BYLR264W 204 nt3.48□□□□□ -1.85
NUP42P49686 DCP2YNL118C 2913 nt3.48□□□□□ -1.85
NUP42P49686 NUP159YIL115C 4383 nt3.48□□□□□ -1.85
NUP42P49686 PBY1YBR094W 2262 nt3.47□□□□□ -1.85
NUP42P49686 SWR1YDR334W 4545 nt3.47□□□□□ -1.85
NUP42P49686 TFC4YGR047C 3078 nt3.47□□□□□ -1.85
NUP42P49686 PAU3YCR104W 375 nt3.47□□□□□ -1.85
NUP42P49686 YMR242W-AYMR242W-A 90 nt3.47□□□□□ -1.85
NUP42P49686 YBR099CYBR099C 384 nt3.47□□□□□ -1.85
NUP42P49686 SWI3YJL176C 2478 nt3.47□□□□□ -1.85
NUP42P49686 RAD34YDR314C 2079 nt3.47□□□□□ -1.85
NUP42P49686 HOS4YIL112W 3252 nt3.46□□□□□ -1.85
NUP42P49686 KIN2YLR096W 3444 nt3.46□□□□□ -1.86
NUP42P49686 YCR102W-AYCR102W-A 198 nt3.46□□□□□ -1.86
NUP42P49686 ATP7YKL016C 525 nt3.46□□□□□ -1.86
NUP42P49686 RTC1YOL138C 4026 nt3.46□□□□□ -1.86
NUP42P49686 ZIP1YDR285W 2628 nt3.46□□□□□ -1.86
NUP42P49686 YER053C-AYER053C-A 114 nt3.45□□□□□ -1.86
NUP42P49686 YNL103W-AYNL103W-A 90 nt3.45□□□□□ -1.86
NUP42P49686 FLO9YAL063C 3969 nt3.45□□□□□ -1.86
NUP42P49686 BUB1YGR188C 3066 nt3.45□□□□□ -1.86
NUP42P49686 INP51YIL002C 2841 nt3.44□□□□□ -1.86
NUP42P49686 CAF120YNL278W 3183 nt3.44□□□□□ -1.86
NUP42P49686 YME2YMR302C 2553 nt3.44□□□□□ -1.86
NUP42P49686 SIN3YOL004W 4611 nt3.43□□□□□ -1.86
NUP42P49686 SPT4YGR063C 309 nt3.43□□□□□ -1.86
NUP42P49686 YBL006W-AYBL006W-A 150 nt3.43□□□□□ -1.86
NUP42P49686 YOR394C-AYOR394C-A 168 nt3.43□□□□□ -1.86
NUP42P49686 ARO80YDR421W 2853 nt3.43□□□□□ -1.86
NUP42P49686 SLD3YGL113W 2007 nt3.43□□□□□ -1.86
NUP42P49686 PTP2YOR208W 2253 nt3.42□□□□□ -1.86
NUP42P49686 RPO41YFL036W 4056 nt3.42□□□□□ -1.86
NUP42P49686 MRD1YPR112C 2664 nt3.42□□□□□ -1.86
NUP42P49686 NOC3YLR002C 1992 nt3.42□□□□□ -1.86
NUP42P49686 YBT1YLL048C 4986 nt3.42□□□□□ -1.86
NUP42P49686 snR61snR61 90 nt3.42□□□□□ -1.86
NUP42P49686 SBH1YER087C-B 249 nt3.42□□□□□ -1.86
NUP42P49686 YPR169W-AYPR169W-A 219 nt3.42□□□□□ -1.86
NUP42P49686 YCL046WYCL046W 324 nt3.42□□□□□ -1.86
NUP42P49686 SNF2YOR290C 5112 nt3.41□□□□□ -1.86
NUP42P49686 SMC6YLR383W 3345 nt3.41□□□□□ -1.86
NUP42P49686 SAP4YGL229C 2457 nt3.41□□□□□ -1.86
NUP42P49686 tR(ACG)JtR(ACG)J 73 nt3.41□□□□□ -1.86
NUP42P49686 YPL044CYPL044C 549 nt3.41□□□□□ -1.86
NUP42P49686 NAM7YMR080C 2916 nt3.41□□□□□ -1.86
NUP42P49686 RPO31YOR116C 4383 nt3.4□□□□□ -1.86
NUP42P49686 MAD1YGL086W 2250 nt3.4□□□□□ -1.86
NUP42P49686 FLO5YHR211W 3228 nt3.4□□□□□ -1.87
NUP42P49686 CTF4YPR135W 2784 nt3.4□□□□□ -1.87
NUP42P49686 CBF2YGR140W 2871 nt3.4□□□□□ -1.87
NUP42P49686 FRE2YKL220C 2136 nt3.4□□□□□ -1.87
NUP42P49686 AHC1YOR023C 1701 nt3.39□□□□□ -1.87
NUP42P49686 YCR095W-AYCR095W-A 159 nt3.39□□□□□ -1.87
NUP42P49686 TOM5YPR133W-A 153 nt3.39□□□□□ -1.87
NUP42P49686 YLR035C-AYLR035C-A 3468 nt3.39□□□□□ -1.87
NUP42P49686 BUD4YJR092W 4344 nt3.38□□□□□ -1.87
NUP42P49686 RPL22AYLR061W 366 nt3.38□□□□□ -1.87
NUP42P49686 NFT1YKR103W 3657 nt3.38□□□□□ -1.87
NUP42P49686 YMR317WYMR317W 3423 nt3.38□□□□□ -1.87
NUP42P49686 NOP14YDL148C 2433 nt3.36□□□□□ -1.87
NUP42P49686 RPL31AYDL075W 342 nt3.36□□□□□ -1.87
NUP42P49686 SNA2YDR525W-A 240 nt3.36□□□□□ -1.87
NUP42P49686 RPS22AYJL190C 393 nt3.36□□□□□ -1.87
NUP42P49686 AMS1YGL156W 3252 nt3.36□□□□□ -1.87
NUP42P49686 SAF1YBR280C 1914 nt3.35□□□□□ -1.87
NUP42P49686 KTI11YBL071W-A 249 nt3.35□□□□□ -1.87
NUP42P49686 APE2YKL157W 2859 nt3.34□□□□□ -1.87
NUP42P49686 DGR2YKL121W 2559 nt3.34□□□□□ -1.87
NUP42P49686 APL5YPL195W 2799 nt3.34□□□□□ -1.87
NUP42P49686 tX(XXX)DtX(XXX)D 100 nt3.34□□□□□ -1.87
NUP42P49686 YLR282CYLR282C 342 nt3.34□□□□□ -1.87
NUP42P49686 ALA1YOR335C 2877 nt3.34□□□□□ -1.87
NUP42P49686 MAK10YEL053C 2202 nt3.34□□□□□ -1.88
NUP42P49686 RRP5YMR229C 5190 nt3.33□□□□□ -1.88
NUP42P49686 CAT2YML042W 2013 nt3.33□□□□□ -1.88
NUP42P49686 YOR073W-AYOR073W-A 234 nt3.33□□□□□ -1.88
NUP42P49686 FRT2YAL028W 1587 nt3.33□□□□□ -1.88
NUP42P49686 YNL067W-BYNL067W-B 141 nt3.32□□□□□ -1.88
NUP42P49686 YBR206WYBR206W 324 nt3.32□□□□□ -1.88
NUP42P49686 PAA1YDR071C 576 nt3.31□□□□□ -1.88
NUP42P49686 YFR012W-AYFR012W-A 87 nt3.31□□□□□ -1.88
NUP42P49686 COA3YJL062W-A 258 nt3.31□□□□□ -1.88
NUP42P49686 APL2YKL135C 2181 nt3.31□□□□□ -1.88
NUP42P49686 HSH155YMR288W 2916 nt3.3□□□□□ -1.88
NUP42P49686 CMC4YMR194C-B 222 nt3.3□□□□□ -1.88
NUP42P49686 YNL211CYNL211C 261 nt3.3□□□□□ -1.88
NUP42P49686 AUS1YOR011W 4185 nt3.3□□□□□ -1.88
NUP42P49686 CSR2YPR030W 3366 nt3.29□□□□□ -1.88
NUP42P49686 ECM15YBL001C 315 nt3.29□□□□□ -1.88
NUP42P49686 SRO77YBL106C 3033 nt3.29□□□□□ -1.88
NUP42P49686 TUS1YLR425W 3924 nt3.28□□□□□ -1.88
NUP42P49686 YNL018CYNL018C 1839 nt3.28□□□□□ -1.88
NUP42P49686 ENV11YGR071C 2583 nt3.28□□□□□ -1.88
NUP42P49686 MMS1YPR164W 4224 nt3.28□□□□□ -1.88
NUP42P49686 OST4YDL232W 111 nt3.28□□□□□ -1.88
NUP42P49686 ISW1YBR245C 3390 nt3.28□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 75.2 ms