Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 AZF1YOR113W 2745 nt1.3□□□□□ -2.2
CDC40P40968 DGR2YKL121W 2559 nt1.29□□□□□ -2.2
CDC40P40968 FYV8YGR196C 2454 nt1.29□□□□□ -2.2
CDC40P40968 UFD2YDL190C 2886 nt1.29□□□□□ -2.2
CDC40P40968 TOF2YKR010C 2316 nt1.28□□□□□ -2.2
CDC40P40968 EST2YLR318W 2655 nt1.28□□□□□ -2.2
CDC40P40968 SRP14YDL092W 441 nt1.28□□□□□ -2.2
CDC40P40968 YHR028W-AYHR028W-A 321 nt1.28□□□□□ -2.2
CDC40P40968 EMC5YIL027C 426 nt1.28□□□□□ -2.2
CDC40P40968 TIM18YOR297C 579 nt1.28□□□□□ -2.2
CDC40P40968 MXR1YER042W 555 nt1.27□□□□□ -2.21
CDC40P40968 YGR025WYGR025W 303 nt1.27□□□□□ -2.21
CDC40P40968 YHR139C-AYHR139C-A 312 nt1.27□□□□□ -2.21
CDC40P40968 YAL016C-BYAL016C-B 186 nt1.27□□□□□ -2.21
CDC40P40968 VPS55YJR044C 423 nt1.27□□□□□ -2.21
CDC40P40968 POL5YEL055C 3069 nt1.27□□□□□ -2.21
CDC40P40968 SPC110YDR356W 2835 nt1.27□□□□□ -2.21
CDC40P40968 YDR509WYDR509W 348 nt1.26□□□□□ -2.21
CDC40P40968 PAU2YEL049W 363 nt1.26□□□□□ -2.21
CDC40P40968 BIG1YHR101C 1008 nt1.26□□□□□ -2.21
CDC40P40968 snR13snR13 124 nt1.26□□□□□ -2.21
CDC40P40968 YLL054CYLL054C 2532 nt1.26□□□□□ -2.21
CDC40P40968 RAD9YDR217C 3930 nt1.25□□□□□ -2.21
CDC40P40968 RVS161YCR009C 798 nt1.25□□□□□ -2.21
CDC40P40968 YGL217CYGL217C 342 nt1.25□□□□□ -2.21
CDC40P40968 YMR153C-AYMR153C-A 336 nt1.25□□□□□ -2.21
CDC40P40968 GDS1YOR355W 1569 nt1.25□□□□□ -2.21
CDC40P40968 SLX4YLR135W 2247 nt1.24□□□□□ -2.21
CDC40P40968 GUP1YGL084C 1683 nt1.24□□□□□ -2.21
CDC40P40968 YDR003W-AYDR003W-A 123 nt1.24□□□□□ -2.21
CDC40P40968 HUR1YGL168W 333 nt1.24□□□□□ -2.21
CDC40P40968 STE18YJR086W 333 nt1.24□□□□□ -2.21
CDC40P40968 PBI2YNL015W 228 nt1.24□□□□□ -2.21
CDC40P40968 YOP1YPR028W 543 nt1.24□□□□□ -2.21
CDC40P40968 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
CDC40P40968 SGO1YOR073W 1773 nt1.24□□□□□ -2.21
CDC40P40968 IRR1YIL026C 3453 nt1.23□□□□□ -2.21
CDC40P40968 HMLALPHA2YCL067C 633 nt1.23□□□□□ -2.21
CDC40P40968 MATALPHA2YCR039C 633 nt1.23□□□□□ -2.21
CDC40P40968 YDL211CYDL211C 1119 nt1.23□□□□□ -2.21
CDC40P40968 TMA22YJR014W 597 nt1.23□□□□□ -2.21
CDC40P40968 RPL40BYKR094C 387 nt1.23□□□□□ -2.21
CDC40P40968 KAP122YGL016W 3246 nt1.23□□□□□ -2.21
CDC40P40968 NUP145YGL092W 3954 nt1.23□□□□□ -2.21
CDC40P40968 RPF1YHR088W 888 nt1.22□□□□□ -2.21
CDC40P40968 YLR269CYLR269C 351 nt1.22□□□□□ -2.21
CDC40P40968 RPL9BYNL067W 576 nt1.22□□□□□ -2.21
CDC40P40968 NUP120YKL057C 3114 nt1.22□□□□□ -2.21
CDC40P40968 MKT1YNL085W 2493 nt1.21□□□□□ -2.22
CDC40P40968 RRT15YLR162W-A 189 nt1.21□□□□□ -2.22
CDC40P40968 YML009C-AYML009C-A 327 nt1.21□□□□□ -2.22
CDC40P40968 YOR146WYOR146W 306 nt1.21□□□□□ -2.22
CDC40P40968 SWI6YLR182W 2412 nt1.21□□□□□ -2.22
CDC40P40968 YCR001WYCR001W 315 nt1.2□□□□□ -2.22
CDC40P40968 RPL16AYIL133C 600 nt1.2□□□□□ -2.22
CDC40P40968 VPS54YDR027C 2670 nt1.2□□□□□ -2.22
CDC40P40968 MEC1YBR136W 7107 nt1.2□□□□□ -2.22
CDC40P40968 KIP1YBL063W 3336 nt1.19□□□□□ -2.22
CDC40P40968 YDR008CYDR008C 351 nt1.19□□□□□ -2.22
CDC40P40968 YER023C-AYER023C-A 213 nt1.19□□□□□ -2.22
CDC40P40968 FYV12YOR183W 390 nt1.19□□□□□ -2.22
CDC40P40968 YPR063CYPR063C 423 nt1.19□□□□□ -2.22
CDC40P40968 NUP188YML103C 4968 nt1.19□□□□□ -2.22
CDC40P40968 AI5_ALPHAQ0070 1893 nt1.18□□□□□ -2.22
CDC40P40968 AHC1YOR023C 1701 nt1.18□□□□□ -2.22
CDC40P40968 CDC36YDL165W 576 nt1.18□□□□□ -2.22
CDC40P40968 YER135CYER135C 393 nt1.18□□□□□ -2.22
CDC40P40968 YHL009W-AYHL009W-A 1242 nt1.18□□□□□ -2.22
CDC40P40968 URM1YIL008W 300 nt1.18□□□□□ -2.22
CDC40P40968 YLR146W-AYLR146W-A 189 nt1.18□□□□□ -2.22
CDC40P40968 TRM732YMR259C 4263 nt1.18□□□□□ -2.22
CDC40P40968 NOC3YLR002C 1992 nt1.17□□□□□ -2.22
CDC40P40968 LYS14YDR034C 2373 nt1.17□□□□□ -2.22
CDC40P40968 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
CDC40P40968 YLL020CYLL020C 306 nt1.17□□□□□ -2.22
CDC40P40968 YPR153WYPR153W 423 nt1.17□□□□□ -2.22
CDC40P40968 YML108WYML108W 318 nt1.16□□□□□ -2.22
CDC40P40968 PBY1YBR094W 2262 nt1.15□□□□□ -2.22
CDC40P40968 MUK1YPL070W 1839 nt1.15□□□□□ -2.22
CDC40P40968 YDR114CYDR114C 303 nt1.15□□□□□ -2.23
CDC40P40968 YGL239CYGL239C 315 nt1.15□□□□□ -2.23
CDC40P40968 NBL1YHR199C-A 222 nt1.15□□□□□ -2.23
CDC40P40968 RPL32YBL092W 393 nt1.15□□□□□ -2.23
CDC40P40968 snR14snR14 160 nt1.15□□□□□ -2.23
CDC40P40968 YSY6YBR162W-A 198 nt1.15□□□□□ -2.23
CDC40P40968 SPO23YBR250W 1572 nt1.15□□□□□ -2.23
CDC40P40968 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
CDC40P40968 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
CDC40P40968 PRE4YFR050C 801 nt1.14□□□□□ -2.23
CDC40P40968 YIL102CYIL102C 306 nt1.14□□□□□ -2.23
CDC40P40968 COA6YMR244C-A 315 nt1.14□□□□□ -2.23
CDC40P40968 snR189snR189 189 nt1.14□□□□□ -2.23
CDC40P40968 PIG1YLR273C 1947 nt1.14□□□□□ -2.23
CDC40P40968 MSN5YDR335W 3675 nt1.14□□□□□ -2.23
CDC40P40968 SAS3YBL052C 2496 nt1.13□□□□□ -2.23
CDC40P40968 YER084W-AYER084W-A 513 nt1.13□□□□□ -2.23
CDC40P40968 YGR290WYGR290W 444 nt1.13□□□□□ -2.23
CDC40P40968 YHR130CYHR130C 336 nt1.13□□□□□ -2.23
CDC40P40968 PHS1YJL097W 654 nt1.13□□□□□ -2.23
CDC40P40968 RPS27AYKL156W 249 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 155.9 ms