Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 HDA3YPR179C 1968 nt0.88□□□□□ -2.27
RFC4P40339 YJR140W-AYJR140W-A 150 nt0.88□□□□□ -2.27
RFC4P40339 RPS18BYML026C 441 nt0.88□□□□□ -2.27
RFC4P40339 YMR013C-AYMR013C-A 150 nt0.88□□□□□ -2.27
RFC4P40339 snR14snR14 160 nt0.88□□□□□ -2.27
RFC4P40339 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
RFC4P40339 BEM2YER155C 6504 nt0.87□□□□□ -2.27
RFC4P40339 tT(UGU)Q1tT(UGU)Q1 76 nt0.87□□□□□ -2.27
RFC4P40339 YMR242W-AYMR242W-A 90 nt0.87□□□□□ -2.27
RFC4P40339 YFL002W-BYFL002W-B 1317 nt0.87□□□□□ -2.27
RFC4P40339 YGR161W-AYGR161W-A 1317 nt0.87□□□□□ -2.27
RFC4P40339 YBL100W-AYBL100W-A 1317 nt0.87□□□□□ -2.27
RFC4P40339 YOR192C-AYOR192C-A 1317 nt0.87□□□□□ -2.27
RFC4P40339 YCL020WYCL020W 1317 nt0.87□□□□□ -2.27
RFC4P40339 snR79snR79 84 nt0.86□□□□□ -2.27
RFC4P40339 YEL018C-AYEL018C-A 534 nt0.86□□□□□ -2.27
RFC4P40339 TIM10YHR005C-A 282 nt0.86□□□□□ -2.27
RFC4P40339 SWS2YNL081C 432 nt0.86□□□□□ -2.27
RFC4P40339 YOR029WYOR029W 336 nt0.86□□□□□ -2.27
RFC4P40339 IRC23YOR044W 474 nt0.86□□□□□ -2.27
RFC4P40339 BI4Q0120 1917 nt0.85□□□□□ -2.27
RFC4P40339 SEM1YDR363W-A 270 nt0.85□□□□□ -2.27
RFC4P40339 SMC1YFL008W 3678 nt0.85□□□□□ -2.27
RFC4P40339 LRP1YHR081W 555 nt0.85□□□□□ -2.27
RFC4P40339 SAS3YBL052C 2496 nt0.85□□□□□ -2.27
RFC4P40339 COX7YMR256C 183 nt0.85□□□□□ -2.27
RFC4P40339 COG4YPR105C 2586 nt0.84□□□□□ -2.27
RFC4P40339 YAR009CYAR009C 3591 nt0.84□□□□□ -2.27
RFC4P40339 DOP1YDR141C 5097 nt0.84□□□□□ -2.27
RFC4P40339 snR5snR5 204 nt0.84□□□□□ -2.27
RFC4P40339 YDL152WYDL152W 366 nt0.84□□□□□ -2.27
RFC4P40339 YHR028W-AYHR028W-A 321 nt0.84□□□□□ -2.27
RFC4P40339 SDS22YKL193C 1017 nt0.84□□□□□ -2.27
RFC4P40339 YNL146C-AYNL146C-A 195 nt0.84□□□□□ -2.27
RFC4P40339 YPL197CYPL197C 414 nt0.84□□□□□ -2.27
RFC4P40339 BUD3YCL014W 4911 nt0.84□□□□□ -2.28
RFC4P40339 PAC1YOR269W 1485 nt0.84□□□□□ -2.28
RFC4P40339 YGR045CYGR045C 363 nt0.82□□□□□ -2.28
RFC4P40339 PAM16YJL104W 450 nt0.82□□□□□ -2.28
RFC4P40339 YLR366WYLR366W 306 nt0.82□□□□□ -2.28
RFC4P40339 ERP4YOR016C 624 nt0.82□□□□□ -2.28
RFC4P40339 YBR012CYBR012C 420 nt0.82□□□□□ -2.28
RFC4P40339 NOC3YLR002C 1992 nt0.82□□□□□ -2.28
RFC4P40339 ZIP1YDR285W 2628 nt0.81□□□□□ -2.28
RFC4P40339 SLX9YGR081C 633 nt0.81□□□□□ -2.28
RFC4P40339 YOP1YPR028W 543 nt0.81□□□□□ -2.28
RFC4P40339 YPR096CYPR096C 303 nt0.81□□□□□ -2.28
RFC4P40339 YCL002CYCL002C 792 nt0.81□□□□□ -2.28
RFC4P40339 TOF2YKR010C 2316 nt0.8□□□□□ -2.28
RFC4P40339 YCR100CYCR100C 951 nt0.8□□□□□ -2.28
RFC4P40339 SRP14YDL092W 441 nt0.8□□□□□ -2.28
RFC4P40339 YDR003W-AYDR003W-A 123 nt0.8□□□□□ -2.28
RFC4P40339 YDR220CYDR220C 294 nt0.8□□□□□ -2.28
RFC4P40339 YGR228WYGR228W 345 nt0.8□□□□□ -2.28
RFC4P40339 BMT5YIL096C 1011 nt0.8□□□□□ -2.28
RFC4P40339 YKL111CYKL111C 336 nt0.8□□□□□ -2.28
RFC4P40339 MPT5YGL178W 2580 nt0.8□□□□□ -2.28
RFC4P40339 AIM9YER080W 1884 nt0.8□□□□□ -2.28
RFC4P40339 SWI5YDR146C 2130 nt0.79□□□□□ -2.28
RFC4P40339 YGL015CYGL015C 393 nt0.79□□□□□ -2.28
RFC4P40339 RPC10YHR143W-A 213 nt0.79□□□□□ -2.28
RFC4P40339 YAL066WYAL066W 309 nt0.79□□□□□ -2.28
RFC4P40339 YLR271WYLR271W 825 nt0.79□□□□□ -2.28
RFC4P40339 PAU24YBR301W 363 nt0.79□□□□□ -2.28
RFC4P40339 UTP13YLR222C 2454 nt0.79□□□□□ -2.28
RFC4P40339 NUP157YER105C 4176 nt0.78□□□□□ -2.28
RFC4P40339 YPR117WYPR117W 7470 nt0.78□□□□□ -2.28
RFC4P40339 PIG1YLR273C 1947 nt0.78□□□□□ -2.28
RFC4P40339 CYC7YEL039C 342 nt0.78□□□□□ -2.28
RFC4P40339 TMA22YJR014W 597 nt0.78□□□□□ -2.28
RFC4P40339 QCR7YDR529C 384 nt0.77□□□□□ -2.29
RFC4P40339 RPL16AYIL133C 600 nt0.77□□□□□ -2.29
RFC4P40339 UBP3YER151C 2739 nt0.76□□□□□ -2.29
RFC4P40339 MND1YGL183C 660 nt0.76□□□□□ -2.29
RFC4P40339 YAP3YHL009C 993 nt0.76□□□□□ -2.29
RFC4P40339 RPS30BYOR182C 192 nt0.76□□□□□ -2.29
RFC4P40339 NUT2YPR168W 474 nt0.76□□□□□ -2.29
RFC4P40339 YBR221W-AYBR221W-A 105 nt0.76□□□□□ -2.29
RFC4P40339 SET3YKR029C 2256 nt0.75□□□□□ -2.29
RFC4P40339 YDL073WYDL073W 2955 nt0.75□□□□□ -2.29
RFC4P40339 CSM4YPL200W 471 nt0.75□□□□□ -2.29
RFC4P40339 HNT1YDL125C 477 nt0.74□□□□□ -2.29
RFC4P40339 YDR509WYDR509W 348 nt0.74□□□□□ -2.29
RFC4P40339 YPR099CYPR099C 357 nt0.74□□□□□ -2.29
RFC4P40339 YBR200W-AYBR200W-A 165 nt0.74□□□□□ -2.29
RFC4P40339 AIM44YPL158C 2277 nt0.74□□□□□ -2.29
RFC4P40339 snR9snR9 187 nt0.73□□□□□ -2.29
RFC4P40339 YMR254CYMR254C 309 nt0.73□□□□□ -2.29
RFC4P40339 YBR063CYBR063C 1215 nt0.73□□□□□ -2.29
RFC4P40339 YBR121C-AYBR121C-A 159 nt0.73□□□□□ -2.29
RFC4P40339 RIM20YOR275C 1986 nt0.73□□□□□ -2.29
RFC4P40339 YDR114CYDR114C 303 nt0.72□□□□□ -2.29
RFC4P40339 YER188C-AYER188C-A 300 nt0.72□□□□□ -2.29
RFC4P40339 RUF22RUF22 515 nt0.72□□□□□ -2.29
RFC4P40339 IPP1YBR011C 864 nt0.72□□□□□ -2.29
RFC4P40339 YOR199WYOR199W 330 nt0.72□□□□□ -2.29
RFC4P40339 PAN3YKL025C 2040 nt0.72□□□□□ -2.29
RFC4P40339 MKT1YNL085W 2493 nt0.72□□□□□ -2.29
RFC4P40339 YDL206WYDL206W 2289 nt0.71□□□□□ -2.3
RFC4P40339 YDR008CYDR008C 351 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 72.1 ms