Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 DFG16YOR030W 1860 nt2.62□□□□□ -1.99
NMD2P38798 YJL052C-AYJL052C-A 120 nt2.61□□□□□ -1.99
NMD2P38798 CGI121YML036W 546 nt2.61□□□□□ -1.99
NMD2P38798 HCH1YNL281W 462 nt2.61□□□□□ -1.99
NMD2P38798 GUP1YGL084C 1683 nt2.6□□□□□ -1.99
NMD2P38798 PEX8YGR077C 1770 nt2.6□□□□□ -1.99
NMD2P38798 YCR087C-AYCR087C-A 462 nt2.6□□□□□ -1.99
NMD2P38798 ATP7YKL016C 525 nt2.6□□□□□ -1.99
NMD2P38798 YNL114CYNL114C 372 nt2.6□□□□□ -1.99
NMD2P38798 BUD2YKL092C 3315 nt2.6□□□□□ -1.99
NMD2P38798 SSD1YDR293C 3753 nt2.6□□□□□ -1.99
NMD2P38798 CAT2YML042W 2013 nt2.59□□□□□ -1.99
NMD2P38798 RPS20YHL015W 366 nt2.59□□□□□ -1.99
NMD2P38798 REV3YPL167C 4515 nt2.59□□□□□ -1.99
NMD2P38798 CHC1YGL206C 4962 nt2.59□□□□□ -2
NMD2P38798 ARP7YPR034W 1434 nt2.59□□□□□ -2
NMD2P38798 IRC8YJL051W 2469 nt2.58□□□□□ -2
NMD2P38798 PUT3YKL015W 2940 nt2.57□□□□□ -2
NMD2P38798 YAR053WYAR053W 297 nt2.57□□□□□ -2
NMD2P38798 YBL073WYBL073W 312 nt2.57□□□□□ -2
NMD2P38798 IRC23YOR044W 474 nt2.57□□□□□ -2
NMD2P38798 HHT1YBR010W 411 nt2.57□□□□□ -2
NMD2P38798 HER1YOR227W 3741 nt2.56□□□□□ -2
NMD2P38798 VPS34YLR240W 2628 nt2.55□□□□□ -2
NMD2P38798 YEL057CYEL057C 702 nt2.55□□□□□ -2
NMD2P38798 TFC8YPL007C 1767 nt2.55□□□□□ -2
NMD2P38798 YPR016W-AYPR016W-A 261 nt2.55□□□□□ -2
NMD2P38798 USO1YDL058W 5373 nt2.55□□□□□ -2
NMD2P38798 PRE4YFR050C 801 nt2.54□□□□□ -2
NMD2P38798 YIL059CYIL059C 366 nt2.54□□□□□ -2
NMD2P38798 YLR146W-AYLR146W-A 189 nt2.54□□□□□ -2
NMD2P38798 BIL1YOR304C-A 231 nt2.54□□□□□ -2
NMD2P38798 MF(ALPHA)1YPL187W 498 nt2.54□□□□□ -2
NMD2P38798 RGA1YOR127W 3024 nt2.54□□□□□ -2
NMD2P38798 UFD4YKL010C 4452 nt2.53□□□□□ -2
NMD2P38798 DGR1YNL130C-A 147 nt2.53□□□□□ -2
NMD2P38798 ATG9YDL149W 2994 nt2.53□□□□□ -2
NMD2P38798 BRE1YDL074C 2103 nt2.53□□□□□ -2.01
NMD2P38798 SSQ1YLR369W 1974 nt2.52□□□□□ -2.01
NMD2P38798 YDL240C-AYDL240C-A 138 nt2.52□□□□□ -2.01
NMD2P38798 YER088C-AYER088C-A 324 nt2.52□□□□□ -2.01
NMD2P38798 YHR052W-AYHR052W-A 195 nt2.52□□□□□ -2.01
NMD2P38798 YHR054W-AYHR054W-A 195 nt2.52□□□□□ -2.01
NMD2P38798 HDA3YPR179C 1968 nt2.52□□□□□ -2.01
NMD2P38798 ATG11YPR049C 3537 nt2.52□□□□□ -2.01
NMD2P38798 ELG1YOR144C 2376 nt2.51□□□□□ -2.01
NMD2P38798 FMP23YBR047W 528 nt2.51□□□□□ -2.01
NMD2P38798 SWI5YDR146C 2130 nt2.51□□□□□ -2.01
NMD2P38798 NOP14YDL148C 2433 nt2.51□□□□□ -2.01
NMD2P38798 PXA2YKL188C 2562 nt2.5□□□□□ -2.01
NMD2P38798 PAU18YLL064C 363 nt2.5□□□□□ -2.01
NMD2P38798 PAU6YNR076W 363 nt2.5□□□□□ -2.01
NMD2P38798 YPL038W-AYPL038W-A 192 nt2.5□□□□□ -2.01
NMD2P38798 PDR8YLR266C 2106 nt2.5□□□□□ -2.01
NMD2P38798 KOG1YHR186C 4674 nt2.49□□□□□ -2.01
NMD2P38798 YFR016CYFR016C 3702 nt2.49□□□□□ -2.01
NMD2P38798 MCM22YJR135C 720 nt2.49□□□□□ -2.01
NMD2P38798 TDA9YML081W 3756 nt2.49□□□□□ -2.01
NMD2P38798 COS111YBR203W 2775 nt2.49□□□□□ -2.01
NMD2P38798 OSH6YKR003W 1347 nt2.48□□□□□ -2.01
NMD2P38798 SWI6YLR182W 2412 nt2.48□□□□□ -2.01
NMD2P38798 YOR343W-BYOR343W-B 5313 nt2.48□□□□□ -2.01
NMD2P38798 YDL118WYDL118W 381 nt2.48□□□□□ -2.01
NMD2P38798 YHR073W-AYHR073W-A 177 nt2.48□□□□□ -2.01
NMD2P38798 YOR072W-AYOR072W-A 249 nt2.48□□□□□ -2.01
NMD2P38798 EFR3YMR212C 2349 nt2.48□□□□□ -2.01
NMD2P38798 UBP2YOR124C 3819 nt2.47□□□□□ -2.01
NMD2P38798 YCL046WYCL046W 324 nt2.47□□□□□ -2.01
NMD2P38798 YGR250CYGR250C 2346 nt2.47□□□□□ -2.01
NMD2P38798 NOP53YPL146C 1368 nt2.47□□□□□ -2.01
NMD2P38798 TOR2YKL203C 7425 nt2.46□□□□□ -2.02
NMD2P38798 EMP24YGL200C 612 nt2.46□□□□□ -2.02
NMD2P38798 YGR265WYGR265W 411 nt2.46□□□□□ -2.02
NMD2P38798 YHR071C-AYHR071C-A 321 nt2.46□□□□□ -2.02
NMD2P38798 tW(UCA)QtW(UCA)Q 74 nt2.46□□□□□ -2.02
NMD2P38798 ZRG17YNR039C 1818 nt2.46□□□□□ -2.02
NMD2P38798 HCS1YKL017C 2052 nt2.46□□□□□ -2.02
NMD2P38798 CTR9YOL145C 3234 nt2.45□□□□□ -2.02
NMD2P38798 CFT2YLR115W 2580 nt2.45□□□□□ -2.02
NMD2P38798 ABM1YJR108W 372 nt2.45□□□□□ -2.02
NMD2P38798 FAB1YFR019W 6837 nt2.45□□□□□ -2.02
NMD2P38798 PAC1YOR269W 1485 nt2.45□□□□□ -2.02
NMD2P38798 MSC6YOR354C 2079 nt2.45□□□□□ -2.02
NMD2P38798 SPP41YDR464W 4308 nt2.44□□□□□ -2.02
NMD2P38798 MGA2YIR033W 3342 nt2.44□□□□□ -2.02
NMD2P38798 SGO1YOR073W 1773 nt2.44□□□□□ -2.02
NMD2P38798 SEC63YOR254C 1992 nt2.43□□□□□ -2.02
NMD2P38798 YHL041WYHL041W 450 nt2.43□□□□□ -2.02
NMD2P38798 MRPL31YKL138C 396 nt2.43□□□□□ -2.02
NMD2P38798 YPL225WYPL225W 441 nt2.43□□□□□ -2.02
NMD2P38798 SEY1YOR165W 2331 nt2.43□□□□□ -2.02
NMD2P38798 YMR045CYMR045C 5268 nt2.42□□□□□ -2.02
NMD2P38798 IRE1YHR079C 3348 nt2.42□□□□□ -2.02
NMD2P38798 NUT2YPR168W 474 nt2.42□□□□□ -2.02
NMD2P38798 MAK10YEL053C 2202 nt2.42□□□□□ -2.02
NMD2P38798 LYS14YDR034C 2373 nt2.42□□□□□ -2.02
NMD2P38798 YCL023CYCL023C 348 nt2.41□□□□□ -2.02
NMD2P38798 RKM1YPL208W 1752 nt2.41□□□□□ -2.02
NMD2P38798 HIR3YJR140C 4947 nt2.4□□□□□ -2.02
NMD2P38798 GYP5YPL249C 2685 nt2.4□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 61 ms